RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 TRIM37O94972 964 aa17.55■□□□□ 0.4
GFAP-221ENST00000592065 LRRC37A3O60309 1634 aa17.55■□□□□ 0.4
GFAP-221ENST00000592065 DEKP35659 375 aaKnown RBP17.54■□□□□ 0.4
GFAP-221ENST00000592065 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
GFAP-221ENST00000592065 DDB1Q16531 1140 aa17.53■□□□□ 0.4
GFAP-221ENST00000592065 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
GFAP-221ENST00000592065 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
GFAP-221ENST00000592065 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
GFAP-221ENST00000592065 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.4
GFAP-221ENST00000592065 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
GFAP-221ENST00000592065 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
GFAP-221ENST00000592065 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.39
GFAP-221ENST00000592065 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.39
GFAP-221ENST00000592065 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
GFAP-221ENST00000592065 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
GFAP-221ENST00000592065 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
GFAP-221ENST00000592065 KNSTRNQ9Y448 316 aa17.51■□□□□ 0.39
GFAP-221ENST00000592065 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
GFAP-221ENST00000592065 MS4A1P11836 297 aa17.5■□□□□ 0.39
GFAP-221ENST00000592065 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
GFAP-221ENST00000592065 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
GFAP-221ENST00000592065 DISP2A7MBM2 1401 aa17.49■□□□□ 0.39
GFAP-221ENST00000592065 NBR1Q14596 966 aa17.49■□□□□ 0.39
GFAP-221ENST00000592065 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
GFAP-221ENST00000592065 FLT4P35916 1363 aa17.48■□□□□ 0.39
GFAP-221ENST00000592065 MORC1Q86VD1 984 aa17.48■□□□□ 0.39
GFAP-221ENST00000592065 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
GFAP-221ENST00000592065 MEGF6O75095 1541 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 UTRNP46939 3433 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 PDE4AP27815 886 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 IL2RBP14784 551 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
GFAP-221ENST00000592065 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 ABCC6O95255 1503 aa17.47■□□□□ 0.39
GFAP-221ENST00000592065 KCNQ2O43526 872 aa17.46■□□□□ 0.39
GFAP-221ENST00000592065 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
GFAP-221ENST00000592065 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
GFAP-221ENST00000592065 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.38
GFAP-221ENST00000592065 EXOC5O00471 708 aa17.45■□□□□ 0.38
GFAP-221ENST00000592065 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
GFAP-221ENST00000592065 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
GFAP-221ENST00000592065 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
GFAP-221ENST00000592065 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
GFAP-221ENST00000592065 APBA3O96018 575 aa17.44■□□□□ 0.38
GFAP-221ENST00000592065 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
GFAP-221ENST00000592065 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
GFAP-221ENST00000592065 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
GFAP-221ENST00000592065 PLIN1O60240 522 aa17.42■□□□□ 0.38
GFAP-221ENST00000592065 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
GFAP-221ENST00000592065 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
GFAP-221ENST00000592065 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
GFAP-221ENST00000592065 EYA1Q99502 592 aa17.41■□□□□ 0.38
GFAP-221ENST00000592065 ADAMTS8Q9UP79 889 aa17.41■□□□□ 0.38
GFAP-221ENST00000592065 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
GFAP-221ENST00000592065 RGPD1P0DJD0 1748 aa17.39■□□□□ 0.37
GFAP-221ENST00000592065 BAG6P46379 1132 aa17.39■□□□□ 0.37
GFAP-221ENST00000592065 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
GFAP-221ENST00000592065 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
GFAP-221ENST00000592065 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
GFAP-221ENST00000592065 CCDC125Q86Z20 511 aa17.38■□□□□ 0.37
GFAP-221ENST00000592065 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
GFAP-221ENST00000592065 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
GFAP-221ENST00000592065 MTHFSP49914 203 aa17.38■□□□□ 0.37
GFAP-221ENST00000592065 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
GFAP-221ENST00000592065 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
GFAP-221ENST00000592065 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
GFAP-221ENST00000592065 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
GFAP-221ENST00000592065 NSD2O96028 1365 aa17.37■□□□□ 0.37
GFAP-221ENST00000592065 KCNQ4P56696 695 aa17.36■□□□□ 0.37
GFAP-221ENST00000592065 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
GFAP-221ENST00000592065 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
GFAP-221ENST00000592065 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
GFAP-221ENST00000592065 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
GFAP-221ENST00000592065 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
GFAP-221ENST00000592065 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
GFAP-221ENST00000592065 CYP27B1O15528 508 aa17.33■□□□□ 0.36
GFAP-221ENST00000592065 WDR43Q15061 677 aaKnown RBP eCLIP17.33■□□□□ 0.36
GFAP-221ENST00000592065 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
GFAP-221ENST00000592065 HMOX1P09601 288 aa17.32■□□□□ 0.36
GFAP-221ENST00000592065 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
GFAP-221ENST00000592065 R3HDM1Q15032 1099 aaKnown RBP17.32■□□□□ 0.36
GFAP-221ENST00000592065 PROM2Q8N271 834 aa17.32■□□□□ 0.36
GFAP-221ENST00000592065 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
GFAP-221ENST00000592065 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
GFAP-221ENST00000592065 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
GFAP-221ENST00000592065 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
GFAP-221ENST00000592065 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
GFAP-221ENST00000592065 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
GFAP-221ENST00000592065 IL13P35225 146 aa17.29■□□□□ 0.36
GFAP-221ENST00000592065 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
GFAP-221ENST00000592065 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
GFAP-221ENST00000592065 BTAF1O14981 1849 aa17.29■□□□□ 0.36
GFAP-221ENST00000592065 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
GFAP-221ENST00000592065 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
GFAP-221ENST00000592065 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
GFAP-221ENST00000592065 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
GFAP-221ENST00000592065 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
GFAP-221ENST00000592065 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
GFAP-221ENST00000592065 NUP188Q5SRE5 1749 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms