RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ZNF445P59923 1031 aa14.83□□□□□ -0.04
SMARCA4-217ENST00000591595 NOP2P46087 812 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-217ENST00000591595 KLHL40Q2TBA0 621 aa14.83□□□□□ -0.04
SMARCA4-217ENST00000591595 CEP120Q8N960 986 aa14.83□□□□□ -0.04
SMARCA4-217ENST00000591595 PLCD4Q9BRC7 762 aa14.83□□□□□ -0.04
SMARCA4-217ENST00000591595 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 TRIM35Q9UPQ4 493 aa14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 TMX1Q9H3N1 280 aa14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 NSD2O96028 1365 aa14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 KIF16BQ96L93 1317 aa14.82□□□□□ -0.04
SMARCA4-217ENST00000591595 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 ELL2O00472 640 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 DHX16O60231 1041 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 DDIT3P35638 169 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 CCDC172P0C7W6 258 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 RAB3GAP1Q15042 981 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
SMARCA4-217ENST00000591595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.81□□□□□ -0.043e-7■■■■□ 26.2
SMARCA4-217ENST00000591595 NRXN1Q9ULB1 1477 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 ASXL2Q76L83 1435 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 RAD51AP2Q09MP3 1159 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 PRAM1Q96QH2 718 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 MROH2AA6NES4 1674 aa14.8□□□□□ -0.04
SMARCA4-217ENST00000591595 FYB1O15117 783 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 PPRC1Q5VV67 1664 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 C1orf115Q9H7X2 142 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 SHPRHQ149N8 1683 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 SATB1Q01826 763 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 NOLC1Q14978 699 aaKnown RBP eCLIP14.79□□□□□ -0.047e-6■□□□□ 9
SMARCA4-217ENST00000591595 HSP90AB3PQ58FF7 597 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 ICE2Q659A1 982 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 ZBTB40Q9NUA8 1239 aa14.79□□□□□ -0.04
SMARCA4-217ENST00000591595 MROH1Q8NDA8 1641 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 FBLN1P23142 703 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 IDI1Q13907 227 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 PIBF1Q8WXW3 757 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 CTNNA3Q9UI47 895 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 DDX41Q9UJV9 622 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 ADGRB3O60242 1522 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 NCOA3Q9Y6Q9 1424 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
SMARCA4-217ENST00000591595 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 HMOX1P09601 288 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 PRKAR2BP31323 418 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 CHD1LQ86WJ1 897 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 RASSF4Q9H2L5 321 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 NBPF20Q3BBV1 942 aa14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 PUS7Q96PZ0 661 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 THUMPD2Q9BTF0 503 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-217ENST00000591595 SETBP1Q9Y6X0 1596 aa14.77□□□□□ -0.05
SMARCA4-217ENST00000591595 CD109Q6YHK3 1445 aa14.77□□□□□ -0.05
SMARCA4-217ENST00000591595 IRF6O14896 467 aa14.77□□□□□ -0.05
SMARCA4-217ENST00000591595 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.05
SMARCA4-217ENST00000591595 GPATCH11Q8N954 259 aa14.77□□□□□ -0.05
SMARCA4-217ENST00000591595 PRIM1P49642 420 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-217ENST00000591595 HNRNPH2P55795 449 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-217ENST00000591595 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-217ENST00000591595 CABP1Q9NZU7 370 aa14.76□□□□□ -0.05
SMARCA4-217ENST00000591595 ABCC11Q96J66 1382 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 NUCB1Q02818 461 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 MORC2Q9Y6X9 1032 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 ADGRB1O14514 1584 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 MYO3AQ8NEV4 1616 aa14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
SMARCA4-217ENST00000591595 RIOK3O14730 519 aaKnown RBP14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 CHAF1AQ13111 956 aaPredicted RBP14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 IL16Q14005 1332 aa14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 GOLIM4O00461 696 aa14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 KRT222Q8N1A0 295 aa14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 SLC26A8Q96RN1 970 aa14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 BRMS1Q9HCU9 246 aa14.74□□□□□ -0.05
SMARCA4-217ENST00000591595 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
SMARCA4-217ENST00000591595 CTIFO43310 598 aaKnown RBP14.73□□□□□ -0.05
SMARCA4-217ENST00000591595 GUCY2CP25092 1073 aa14.73□□□□□ -0.05
SMARCA4-217ENST00000591595 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
SMARCA4-217ENST00000591595 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
SMARCA4-217ENST00000591595 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
SMARCA4-217ENST00000591595 FCHSD2O94868 740 aa14.72□□□□□ -0.05
SMARCA4-217ENST00000591595 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
SMARCA4-217ENST00000591595 CREBRFQ8IUR6 639 aa14.72□□□□□ -0.05
SMARCA4-217ENST00000591595 CLSTN1O94985 981 aa14.71□□□□□ -0.05
SMARCA4-217ENST00000591595 SH3BP1Q9Y3L3 701 aa14.71□□□□□ -0.05
SMARCA4-217ENST00000591595 KIDINS220Q9ULH0 1771 aa14.71□□□□□ -0.05
SMARCA4-217ENST00000591595 LMTK2Q8IWU2 1503 aa14.71□□□□□ -0.05
SMARCA4-217ENST00000591595 SEMA3FQ13275 785 aa14.71□□□□□ -0.05
SMARCA4-217ENST00000591595 NCBP1Q09161 790 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms