RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-212ENST00000591462 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
PRKCSH-212ENST00000591462 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
PRKCSH-212ENST00000591462 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
PRKCSH-212ENST00000591462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRKCSH-212ENST00000591462 MSH6P52701 1360 aa17.81■□□□□ 0.44
PRKCSH-212ENST00000591462 ESPNB1AK53 854 aa17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 SSFA2P28290 1259 aa17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
PRKCSH-212ENST00000591462 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-212ENST00000591462 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
PRKCSH-212ENST00000591462 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
PRKCSH-212ENST00000591462 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-212ENST00000591462 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
PRKCSH-212ENST00000591462 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
PRKCSH-212ENST00000591462 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
PRKCSH-212ENST00000591462 GNAI1P63096 354 aa17.77■□□□□ 0.44
PRKCSH-212ENST00000591462 CDC45O75419 566 aa17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 ATF3P18847 181 aa17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-212ENST00000591462 IL13P35225 146 aa17.75■□□□□ 0.43
PRKCSH-212ENST00000591462 CLEC17AQ6ZS10 378 aa17.75■□□□□ 0.43
PRKCSH-212ENST00000591462 TOM1O60784 492 aa17.75■□□□□ 0.43
PRKCSH-212ENST00000591462 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-212ENST00000591462 PTMSP20962 102 aa17.74■□□□□ 0.43
PRKCSH-212ENST00000591462 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-212ENST00000591462 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
PRKCSH-212ENST00000591462 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
PRKCSH-212ENST00000591462 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
PRKCSH-212ENST00000591462 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-212ENST00000591462 ATP7BP35670 1465 aa17.73■□□□□ 0.43
PRKCSH-212ENST00000591462 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 MST1RQ04912 1400 aa17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 DCTPP1Q9H773 170 aa17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
PRKCSH-212ENST00000591462 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 KLHL40Q2TBA0 621 aa17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 TTC22Q5TAA0 569 aa17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 NME9Q86XW9 330 aa17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 DDX17Q92841 729 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-212ENST00000591462 AK9Q5TCS8 1911 aa17.71■□□□□ 0.42
PRKCSH-212ENST00000591462 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
PRKCSH-212ENST00000591462 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
PRKCSH-212ENST00000591462 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-212ENST00000591462 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-212ENST00000591462 DCCP43146 1447 aa17.69■□□□□ 0.42
PRKCSH-212ENST00000591462 RABEP1Q15276 862 aa17.69■□□□□ 0.42
PRKCSH-212ENST00000591462 PPP1R9BQ96SB3 815 aa17.69■□□□□ 0.42
PRKCSH-212ENST00000591462 USP26Q9BXU7 913 aa17.69■□□□□ 0.42
PRKCSH-212ENST00000591462 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-212ENST00000591462 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 PKP1Q13835 747 aa17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 C1orf167Q5SNV9 1468 aa17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 RGS12O14924 1447 aa17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 CPSF1Q10570 1443 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 KIF24Q5T7B8 1368 aa17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-212ENST00000591462 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
PRKCSH-212ENST00000591462 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
PRKCSH-212ENST00000591462 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
PRKCSH-212ENST00000591462 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
PRKCSH-212ENST00000591462 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-212ENST00000591462 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 MCTP1Q6DN14 999 aa17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 ANKRD44Q8N8A2 993 aa17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 FMN2Q9NZ56 1722 aa17.66■□□□□ 0.42
PRKCSH-212ENST00000591462 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
PRKCSH-212ENST00000591462 AATKQ6ZMQ8 1374 aa17.65■□□□□ 0.42
PRKCSH-212ENST00000591462 SDSP20132 328 aa17.64■□□□□ 0.42
PRKCSH-212ENST00000591462 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.42
PRKCSH-212ENST00000591462 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-212ENST00000591462 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
PRKCSH-212ENST00000591462 ZNF445P59923 1031 aa17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 HSPA1LP34931 641 aa17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 NUCB2P80303 420 aa17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 HSP90AA2PQ14568 343 aaPredicted RBP17.63■□□□□ 0.41
PRKCSH-212ENST00000591462 CAVIN1Q6NZI2 390 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-212ENST00000591462 RRP9O43818 475 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-212ENST00000591462 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms