RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PSME1Q06323 249 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 DDRGK1Q96HY6 314 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 PNPLA6Q8IY17 1366 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 JCADQ9P266 1359 aa8.85□□□□□ -0.99
VPS4B-205ENST00000591383 PTGER2P43116 358 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 EDC4Q6P2E9 1401 aaKnown RBP8.84□□□□□ -0.99
VPS4B-205ENST00000591383 KRT28Q7Z3Y7 464 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 HDGFL2Q7Z4V5 671 aaPredicted RBP8.84□□□□□ -0.99
VPS4B-205ENST00000591383 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 MARF1Q9Y4F3 1742 aaKnown RBP8.84□□□□□ -0.99
VPS4B-205ENST00000591383 SBNO1A3KN83 1393 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 ARHGEF10O15013 1369 aa8.84□□□□□ -0.99
VPS4B-205ENST00000591383 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
VPS4B-205ENST00000591383 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
VPS4B-205ENST00000591383 FECHP22830 423 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
VPS4B-205ENST00000591383 HIC1Q14526 733 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 UPF1Q92900 1129 aaKnown RBP eCLIP8.83□□□□□ -1
VPS4B-205ENST00000591383 SLC12A5Q9H2X9 1139 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 OCEL1Q9H607 264 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 TERF2IPQ9NYB0 399 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 USP54Q70EL1 1684 aa8.83□□□□□ -1
VPS4B-205ENST00000591383 FCHSD2O94868 740 aa8.82□□□□□ -1
VPS4B-205ENST00000591383 OXER1Q8TDS5 423 aa8.82□□□□□ -1
VPS4B-205ENST00000591383 LRP6O75581 1613 aa8.82□□□□□ -1
VPS4B-205ENST00000591383 PLCH1Q4KWH8 1693 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 SPATA31A3Q5VYP0 1347 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
VPS4B-205ENST00000591383 G3V3G9 751 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 NUTM2GQ5VZR2 741 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
VPS4B-205ENST00000591383 DDX12PQ92771 950 aa8.81□□□□□ -1
VPS4B-205ENST00000591383 PUS7Q96PZ0 661 aaKnown RBP8.81□□□□□ -1
VPS4B-205ENST00000591383 SLIT3O75094 1523 aa8.8□□□□□ -1
VPS4B-205ENST00000591383 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
VPS4B-205ENST00000591383 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
VPS4B-205ENST00000591383 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
VPS4B-205ENST00000591383 LRRC59Q96AG4 307 aaKnown RBP8.8□□□□□ -1
VPS4B-205ENST00000591383 BRD4O60885 1362 aaPredicted RBP8.8□□□□□ -1
VPS4B-205ENST00000591383 LTN1O94822 1766 aa8.8□□□□□ -1
VPS4B-205ENST00000591383 SSH2Q76I76 1423 aa8.8□□□□□ -1
VPS4B-205ENST00000591383 TTC21BQ7Z4L5 1316 aa8.8□□□□□ -1
VPS4B-205ENST00000591383 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
VPS4B-205ENST00000591383 IER5LQ5T953 404 aa8.79□□□□□ -1
VPS4B-205ENST00000591383 MEX3CQ5U5Q3 659 aaKnown RBP8.79□□□□□ -1
VPS4B-205ENST00000591383 OVOS2A0A0J9YW53 1432 aa8.79□□□□□ -1
VPS4B-205ENST00000591383 OVOS2Q6IE36 1432 aa8.79□□□□□ -1
VPS4B-205ENST00000591383 TTC21AQ8NDW8 1320 aa8.79□□□□□ -1
VPS4B-205ENST00000591383 ATMINO43313 823 aaPredicted RBP8.78□□□□□ -1
VPS4B-205ENST00000591383 TMEM92Q6UXU6 159 aa8.78□□□□□ -1
VPS4B-205ENST00000591383 NME9Q86XW9 330 aa8.78□□□□□ -1
VPS4B-205ENST00000591383 ABTB2Q8N961 1025 aa8.78□□□□□ -1
VPS4B-205ENST00000591383 NFAT5O94916 1531 aa8.78□□□□□ -1
VPS4B-205ENST00000591383 SPATA31A6Q5VVP1 1343 aa8.78□□□□□ -1
VPS4B-205ENST00000591383 COL14A1Q05707 1796 aaKnown RBP8.77□□□□□ -1.01
VPS4B-205ENST00000591383 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
VPS4B-205ENST00000591383 TBC1D12O60347 775 aa8.77□□□□□ -1.01
VPS4B-205ENST00000591383 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
VPS4B-205ENST00000591383 PANK3Q9H999 370 aa8.77□□□□□ -1.01
VPS4B-205ENST00000591383 USP19O94966 1318 aa8.77□□□□□ -1.01
VPS4B-205ENST00000591383 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 CLCN6P51797 869 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 PTGDRQ13258 359 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-205ENST00000591383 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-205ENST00000591383 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-205ENST00000591383 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 NRAPQ86VF7 1730 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
VPS4B-205ENST00000591383 EVI5O60447 810 aa8.75□□□□□ -1.01
VPS4B-205ENST00000591383 FLIIQ13045 1269 aa8.75□□□□□ -1.01
VPS4B-205ENST00000591383 L3MBTL3Q96JM7 780 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-205ENST00000591383 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
VPS4B-205ENST00000591383 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
VPS4B-205ENST00000591383 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
VPS4B-205ENST00000591383 NWD2Q9ULI1 1742 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 PLCG2P16885 1265 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 COG3Q96JB2 828 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 LMO7Q8WWI1 1683 aa8.74□□□□□ -1.01
VPS4B-205ENST00000591383 NSD2O96028 1365 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 KIAA0232Q92628 1395 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 RGPD5Q99666 1765 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 MS4A1P11836 297 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
VPS4B-205ENST00000591383 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 PEAK1Q9H792 1746 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 ABCC6O95255 1503 aa8.73□□□□□ -1.01
VPS4B-205ENST00000591383 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-205ENST00000591383 TNNT2P45379 298 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-205ENST00000591383 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms