RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 MS4A1P11836 297 aa28.52■■■□□ 2.16
RUNDC3A-205ENST00000590834 MVPQ14764 893 aaKnown RBP28.52■■■□□ 2.16
RUNDC3A-205ENST00000590834 TWISTNBQ3B726 338 aaPredicted RBP28.52■■■□□ 2.16
RUNDC3A-205ENST00000590834 FTSJ3Q8IY81 847 aaKnown RBP28.52■■■□□ 2.16
RUNDC3A-205ENST00000590834 AAMPQ13685 434 aa28.51■■■□□ 2.15
RUNDC3A-205ENST00000590834 NBPF6Q5VWK0 638 aa28.51■■■□□ 2.15
RUNDC3A-205ENST00000590834 NBPF4Q96M43 638 aa28.51■■■□□ 2.15
RUNDC3A-205ENST00000590834 MED1Q15648 1581 aaPredicted RBP28.5■■■□□ 2.15
RUNDC3A-205ENST00000590834 SKAP1Q86WV1 359 aa28.5■■■□□ 2.15
RUNDC3A-205ENST00000590834 RTF1Q92541 710 aaKnown RBP28.5■■■□□ 2.15
RUNDC3A-205ENST00000590834 ZNF335Q9H4Z2 1342 aaPredicted RBP28.49■■■□□ 2.15
RUNDC3A-205ENST00000590834 RGPD2P0DJD1 1756 aa28.49■■■□□ 2.15
RUNDC3A-205ENST00000590834 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
RUNDC3A-205ENST00000590834 MRPL50Q8N5N7 158 aaKnown RBP28.48■■■□□ 2.15
RUNDC3A-205ENST00000590834 IGHDP01880 384 aa28.48■■■□□ 2.15
RUNDC3A-205ENST00000590834 NPHP3Q7Z494 1330 aa28.48■■■□□ 2.15
RUNDC3A-205ENST00000590834 IPO8O15397 1037 aaKnown RBP28.47■■■□□ 2.15
RUNDC3A-205ENST00000590834 HTATSF1O43719 755 aaKnown RBP28.46■■■□□ 2.15
RUNDC3A-205ENST00000590834 LRRC37A3O60309 1634 aa28.46■■■□□ 2.15
RUNDC3A-205ENST00000590834 PXDNQ92626 1479 aa28.45■■■□□ 2.15
RUNDC3A-205ENST00000590834 LRRC59Q96AG4 307 aaKnown RBP28.45■■■□□ 2.14
RUNDC3A-205ENST00000590834 GNAT3A8MTJ3 354 aa28.44■■■□□ 2.14
RUNDC3A-205ENST00000590834 PCDHB15Q9Y5E8 787 aa28.44■■■□□ 2.14
RUNDC3A-205ENST00000590834 KRT24Q2M2I5 525 aa28.44■■■□□ 2.14
RUNDC3A-205ENST00000590834 AXIN2Q9Y2T1 843 aa28.44■■■□□ 2.14
RUNDC3A-205ENST00000590834 KIAA0232Q92628 1395 aa28.43■■■□□ 2.14
RUNDC3A-205ENST00000590834 MAP3K5Q99683 1374 aa28.42■■■□□ 2.14
RUNDC3A-205ENST00000590834 TNS3Q68CZ2 1445 aa28.42■■■□□ 2.14
RUNDC3A-205ENST00000590834 TMEM57Q8N5G2 664 aa28.42■■■□□ 2.14
RUNDC3A-205ENST00000590834 NCAPD2Q15021 1401 aa28.42■■■□□ 2.14
RUNDC3A-205ENST00000590834 MIS18AQ9NYP9 233 aa28.42■■■□□ 2.14
RUNDC3A-205ENST00000590834 ITPRIPQ8IWB1 547 aa28.41■■■□□ 2.14
RUNDC3A-205ENST00000590834 ANKRD24Q8TF21 1146 aa28.41■■■□□ 2.14
RUNDC3A-205ENST00000590834 BRINP3Q76B58 766 aa28.4■■■□□ 2.14
RUNDC3A-205ENST00000590834 ARHGAP45Q92619 1136 aa28.4■■■□□ 2.14
RUNDC3A-205ENST00000590834 DDX19BQ9UMR2 479 aa28.4■■■□□ 2.14
RUNDC3A-205ENST00000590834 ZC3H6P61129 1189 aaKnown RBP28.39■■■□□ 2.14
RUNDC3A-205ENST00000590834 MSH5O43196 834 aa28.39■■■□□ 2.14
RUNDC3A-205ENST00000590834 IL17REQ8NFR9 667 aa28.39■■■□□ 2.14
RUNDC3A-205ENST00000590834 CAMTA1Q9Y6Y1 1673 aa28.38■■■□□ 2.13
RUNDC3A-205ENST00000590834 TSPYL4Q9UJ04 414 aa28.38■■■□□ 2.13
RUNDC3A-205ENST00000590834 RGPD5Q99666 1765 aa28.38■■■□□ 2.13
RUNDC3A-205ENST00000590834 SPATA31A3Q5VYP0 1347 aa28.38■■■□□ 2.13
RUNDC3A-205ENST00000590834 CRYBG1Q9Y4K1 1723 aa28.35■■■□□ 2.13
RUNDC3A-205ENST00000590834 HAP1P54257 671 aaPredicted RBP28.35■■■□□ 2.13
RUNDC3A-205ENST00000590834 CABLES1Q8TDN4 633 aa28.35■■■□□ 2.13
RUNDC3A-205ENST00000590834 ERBB3P21860 1342 aa28.33■■■□□ 2.13
RUNDC3A-205ENST00000590834 SLAIN2Q9P270 581 aa28.33■■■□□ 2.13
RUNDC3A-205ENST00000590834 COL18A1P39060 1754 aa28.32■■■□□ 2.12
RUNDC3A-205ENST00000590834 ZBTB40Q9NUA8 1239 aa28.32■■■□□ 2.12
RUNDC3A-205ENST00000590834 ABCC4O15439 1325 aa28.31■■■□□ 2.12
RUNDC3A-205ENST00000590834 CEMIPQ8WUJ3 1361 aa28.31■■■□□ 2.12
RUNDC3A-205ENST00000590834 LMO7Q8WWI1 1683 aa28.31■■■□□ 2.12
RUNDC3A-205ENST00000590834 PDE4AP27815 886 aa28.29■■■□□ 2.12
RUNDC3A-205ENST00000590834 TAF7Q15545 349 aaPredicted RBP28.29■■■□□ 2.12
RUNDC3A-205ENST00000590834 RWDD1Q9H446 243 aaPredicted RBP28.29■■■□□ 2.12
RUNDC3A-205ENST00000590834 PLEKHO1Q53GL0 409 aaPredicted RBP28.28■■■□□ 2.12
RUNDC3A-205ENST00000590834 API5Q9BZZ5 524 aaKnown RBP28.28■■■□□ 2.12
RUNDC3A-205ENST00000590834 BABAM1Q9NWV8 329 aa28.28■■■□□ 2.12
RUNDC3A-205ENST00000590834 SOS2Q07890 1332 aaPredicted RBP28.27■■■□□ 2.12
RUNDC3A-205ENST00000590834 AMOTQ4VCS5 1084 aa28.26■■■□□ 2.12
RUNDC3A-205ENST00000590834 RGS3P49796 1198 aa28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 AKAP4Q5JQC9 854 aa28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 ZNF530Q6P9A1 599 aaPredicted RBP28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 BACH2Q9BYV9 841 aa28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 BCL11AQ9H165 835 aa28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 LGR6Q9HBX8 967 aa28.26■■■□□ 2.11
RUNDC3A-205ENST00000590834 ZBTB7BO15156 539 aaPredicted RBP28.25■■■□□ 2.11
RUNDC3A-205ENST00000590834 RGS12O14924 1447 aa28.24■■■□□ 2.11
RUNDC3A-205ENST00000590834 ABCC6O95255 1503 aa28.24■■■□□ 2.11
RUNDC3A-205ENST00000590834 CPDO75976 1380 aa28.23■■■□□ 2.11
RUNDC3A-205ENST00000590834 HDAC1Q13547 482 aaPredicted RBP28.23■■■□□ 2.11
RUNDC3A-205ENST00000590834 CHRNA2Q15822 529 aa28.23■■■□□ 2.11
RUNDC3A-205ENST00000590834 FAM208AQ9UK61 1670 aaKnown RBP28.22■■■□□ 2.11
RUNDC3A-205ENST00000590834 SLC4A2P04920 1241 aa28.21■■■□□ 2.11
RUNDC3A-205ENST00000590834 PTPRCP08575 1304 aa28.2■■■□□ 2.1
RUNDC3A-205ENST00000590834 NLRP2Q9NX02 1062 aa28.19■■■□□ 2.1
RUNDC3A-205ENST00000590834 MPRIPQ6WCQ1 1025 aa28.19■■■□□ 2.1
RUNDC3A-205ENST00000590834 C1orf141Q5JVX7 400 aa28.18■■■□□ 2.1
RUNDC3A-205ENST00000590834 CHMP4BQ9H444 224 aaKnown RBP28.18■■■□□ 2.1
RUNDC3A-205ENST00000590834 PDZRN3Q9UPQ7 1066 aa28.18■■■□□ 2.1
RUNDC3A-205ENST00000590834 VIRMAQ69YN4 1812 aaKnown RBP28.17■■■□□ 2.1
RUNDC3A-205ENST00000590834 KDM3BQ7LBC6 1761 aa28.17■■■□□ 2.1
RUNDC3A-205ENST00000590834 SOS1Q07889 1333 aaPredicted RBP28.16■■■□□ 2.1
RUNDC3A-205ENST00000590834 INTS3Q68E01 1043 aaKnown RBP28.16■■■□□ 2.1
RUNDC3A-205ENST00000590834 RNMTO43148 476 aaKnown RBP28.16■■■□□ 2.1
RUNDC3A-205ENST00000590834 G2E3Q7L622 706 aa28.16■■■□□ 2.1
RUNDC3A-205ENST00000590834 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
RUNDC3A-205ENST00000590834 OVOS2A0A0G2JMS6 1433 aa28.15■■■□□ 2.1
RUNDC3A-205ENST00000590834 CSB-PGBD3P0DP91 1061 aa28.14■■■□□ 2.1
RUNDC3A-205ENST00000590834 TEFQ10587 303 aa28.14■■■□□ 2.09
RUNDC3A-205ENST00000590834 RAPGEF4Q8WZA2 1011 aa28.14■■■□□ 2.09
RUNDC3A-205ENST00000590834 MEGF6O75095 1541 aa28.13■■■□□ 2.09
RUNDC3A-205ENST00000590834 CCDC30Q5VVM6 783 aa28.13■■■□□ 2.09
RUNDC3A-205ENST00000590834 C1orf115Q9H7X2 142 aa28.13■■■□□ 2.09
RUNDC3A-205ENST00000590834 ADAMTS7Q9UKP4 1686 aa28.12■■■□□ 2.09
RUNDC3A-205ENST00000590834 SMC5Q8IY18 1101 aa28.12■■■□□ 2.09
RUNDC3A-205ENST00000590834 STK31Q9BXU1 1019 aa28.12■■■□□ 2.09
RUNDC3A-205ENST00000590834 EIF4A1P60842 406 aaKnown RBP28.11■■■□□ 2.09
RUNDC3A-205ENST00000590834 C8orf34Q49A92 452 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms