RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CC2D1BQ5T0F9 858 aaKnown RBP30.51■■■□□ 2.47
MBD3-208ENST00000590830 PARD3Q8TEW0 1356 aa30.51■■■□□ 2.47
MBD3-208ENST00000590830 PLSCR1O15162 318 aa30.5■■■□□ 2.47
MBD3-208ENST00000590830 TATP17735 454 aaPredicted RBP30.5■■■□□ 2.47
MBD3-208ENST00000590830 PROM2Q8N271 834 aa30.47■■■□□ 2.47
MBD3-208ENST00000590830 PSDA5PKW4 1024 aaPredicted RBP30.45■■■□□ 2.47
MBD3-208ENST00000590830 NPC1L1Q9UHC9 1359 aa30.44■■■□□ 2.46
MBD3-208ENST00000590830 CNGB1Q14028 1251 aaPredicted RBP30.44■■■□□ 2.46
MBD3-208ENST00000590830 SHANK3Q9BYB0 1731 aa30.44■■■□□ 2.46
MBD3-208ENST00000590830 MTHFSP49914 203 aa30.41■■■□□ 2.46
MBD3-208ENST00000590830 R3HDM1Q15032 1099 aaKnown RBP30.41■■■□□ 2.46
MBD3-208ENST00000590830 IGSF1Q8N6C5 1336 aa30.41■■■□□ 2.46
MBD3-208ENST00000590830 NHSQ6T4R5 1651 aa30.4■■■□□ 2.46
MBD3-208ENST00000590830 RREB1Q92766 1687 aa30.4■■■□□ 2.46
MBD3-208ENST00000590830 CYP27B1O15528 508 aa30.4■■■□□ 2.46
MBD3-208ENST00000590830 PRIM1P49642 420 aaKnown RBP30.4■■■□□ 2.46
MBD3-208ENST00000590830 IL13P35225 146 aa30.38■■■□□ 2.45
MBD3-208ENST00000590830 SRCAPQ6ZRS2 3230 aa30.37■■■□□ 2.45
MBD3-208ENST00000590830 TXNRD1Q16881 649 aa30.36■■■□□ 2.45
MBD3-208ENST00000590830 PCDH11XQ9BZA7 1347 aa30.36■■■□□ 2.45
MBD3-208ENST00000590830 PCDH11YQ9BZA8 1340 aa30.36■■■□□ 2.45
MBD3-208ENST00000590830 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
MBD3-208ENST00000590830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.34■■■□□ 2.45
MBD3-208ENST00000590830 RGPD3A6NKT7 1758 aaPredicted RBP30.33■■■□□ 2.45
MBD3-208ENST00000590830 RGPD4Q7Z3J3 1758 aa30.33■■■□□ 2.45
MBD3-208ENST00000590830 AEBP1Q8IUX7 1158 aa30.33■■■□□ 2.45
MBD3-208ENST00000590830 SYTL4Q96C24 671 aaPredicted RBP30.33■■■□□ 2.45
MBD3-208ENST00000590830 SPG7Q9UQ90 795 aa30.33■■■□□ 2.45
MBD3-208ENST00000590830 NBPF14Q5TI25 921 aa30.32■■■□□ 2.44
MBD3-208ENST00000590830 ANO8Q9HCE9 1232 aaPredicted RBP30.31■■■□□ 2.44
MBD3-208ENST00000590830 NKX1-1Q15270 411 aaPredicted RBP30.3■■■□□ 2.44
MBD3-208ENST00000590830 BTAF1O14981 1849 aa30.3■■■□□ 2.44
MBD3-208ENST00000590830 PKD1L3Q7Z443 1732 aa30.3■■■□□ 2.44
MBD3-208ENST00000590830 KAT6BQ8WYB5 2073 aa30.29■■■□□ 2.44
MBD3-208ENST00000590830 SULT6B1Q6IMI4 303 aa30.29■■■□□ 2.44
MBD3-208ENST00000590830 DOT1LQ8TEK3 1739 aa30.27■■■□□ 2.44
MBD3-208ENST00000590830 PHKG2P15735 406 aa30.26■■■□□ 2.43
MBD3-208ENST00000590830 LRRC4BQ9NT99 713 aa30.26■■■□□ 2.43
MBD3-208ENST00000590830 IFNL2Q8IZJ0 200 aa30.24■■■□□ 2.43
MBD3-208ENST00000590830 KDRP35968 1356 aa30.24■■■□□ 2.43
MBD3-208ENST00000590830 DIAPH1O60610 1272 aaKnown RBP30.23■■■□□ 2.43
MBD3-208ENST00000590830 PLEKHG2Q9H7P9 1386 aa30.23■■■□□ 2.43
MBD3-208ENST00000590830 PLEKHO1Q53GL0 409 aaPredicted RBP30.21■■■□□ 2.43
MBD3-208ENST00000590830 MPRIPQ6WCQ1 1025 aa30.21■■■□□ 2.43
MBD3-208ENST00000590830 COL3A1P02461 1466 aaPredicted RBP30.2■■■□□ 2.43
MBD3-208ENST00000590830 PPP2R1AP30153 589 aa30.2■■■□□ 2.43
MBD3-208ENST00000590830 KCNQ4P56696 695 aa30.2■■■□□ 2.43
MBD3-208ENST00000590830 HMOX1P09601 288 aa30.19■■■□□ 2.42
MBD3-208ENST00000590830 SLC15A2Q16348 729 aa30.18■■■□□ 2.42
MBD3-208ENST00000590830 AMOTQ4VCS5 1084 aa30.18■■■□□ 2.42
MBD3-208ENST00000590830 PIGBQ92521 554 aa30.18■■■□□ 2.42
MBD3-208ENST00000590830 PDGFDQ9GZP0 370 aaPredicted RBP30.18■■■□□ 2.42
MBD3-208ENST00000590830 TOGARAM1Q9Y4F4 1720 aa30.18■■■□□ 2.42
MBD3-208ENST00000590830 SLC27A3Q5K4L6 730 aa30.17■■■□□ 2.42
MBD3-208ENST00000590830 ZNF530Q6P9A1 599 aaPredicted RBP30.16■■■□□ 2.42
MBD3-208ENST00000590830 STK32BQ9NY57 414 aa30.16■■■□□ 2.42
MBD3-208ENST00000590830 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.42
MBD3-208ENST00000590830 DDX10Q13206 875 aaKnown RBP30.14■■■□□ 2.42
MBD3-208ENST00000590830 ZNF827Q17R98 1081 aa30.13■■■□□ 2.41
MBD3-208ENST00000590830 PAPPAQ13219 1627 aa30.12■■■□□ 2.41
MBD3-208ENST00000590830 AKT1S1Q96B36 256 aa30.11■■■□□ 2.41
MBD3-208ENST00000590830 U2SURPO15042 1029 aaKnown RBP30.1■■■□□ 2.41
MBD3-208ENST00000590830 DCAF5Q96JK2 942 aa30.1■■■□□ 2.41
MBD3-208ENST00000590830 CCNL1Q9UK58 526 aaPredicted RBP30.1■■■□□ 2.41
MBD3-208ENST00000590830 LY75O60449 1722 aa30.09■■■□□ 2.41
MBD3-208ENST00000590830 ITGB4P16144 1822 aa30.09■■■□□ 2.41
MBD3-208ENST00000590830 PALLDQ8WX93 1383 aa30.09■■■□□ 2.41
MBD3-208ENST00000590830 TMOD3Q9NYL9 352 aa30.09■■■□□ 2.41
MBD3-208ENST00000590830 KDM6AO15550 1401 aaPredicted RBP30.08■■■□□ 2.41
MBD3-208ENST00000590830 ERVV-2B6SEH9 535 aa30.08■■■□□ 2.41
MBD3-208ENST00000590830 HSP90AB1P08238 724 aaKnown RBP30.08■■■□□ 2.41
MBD3-208ENST00000590830 ASAP1Q9ULH1 1129 aa30.08■■■□□ 2.41
MBD3-208ENST00000590830 LRP5O75197 1615 aa30.07■■■□□ 2.4
MBD3-208ENST00000590830 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
MBD3-208ENST00000590830 C1orf141Q5JVX7 400 aa30.06■■■□□ 2.4
MBD3-208ENST00000590830 SMARCC1Q92922 1105 aaPredicted RBP30.06■■■□□ 2.4
MBD3-208ENST00000590830 MTHFSDQ2M296 383 aaKnown RBP30.05■■■□□ 2.4
MBD3-208ENST00000590830 ATG3Q9NT62 314 aa30.05■■■□□ 2.4
MBD3-208ENST00000590830 AKAP4Q5JQC9 854 aa30.03■■■□□ 2.4
MBD3-208ENST00000590830 CASZ1Q86V15 1759 aa30.03■■■□□ 2.4
MBD3-208ENST00000590830 ZBTB7AO95365 584 aa30.01■■■□□ 2.39
MBD3-208ENST00000590830 LGR6Q9HBX8 967 aa30.01■■■□□ 2.39
MBD3-208ENST00000590830 SPON1Q9HCB6 807 aa30.01■■■□□ 2.39
MBD3-208ENST00000590830 CABP4P57796 275 aa30■■■□□ 2.39
MBD3-208ENST00000590830 LOC102724428A0A0B4J2F2 783 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 SIK1P57059 783 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 NFATC2IPQ8NCF5 419 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 RSPH6AQ9H0K4 717 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 TFCP2L1Q9NZI6 479 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 NUDCQ9Y266 331 aa29.98■■■□□ 2.39
MBD3-208ENST00000590830 PNPLA7Q6ZV29 1317 aa29.97■■■□□ 2.39
MBD3-208ENST00000590830 PHACTR3Q96KR7 559 aa29.97■■■□□ 2.39
MBD3-208ENST00000590830 ATF5Q9Y2D1 282 aaPredicted RBP29.97■■■□□ 2.39
MBD3-208ENST00000590830 RNMTO43148 476 aaKnown RBP29.95■■■□□ 2.39
MBD3-208ENST00000590830 U2AF1L5P0DN76 240 aaPredicted RBP29.95■■■□□ 2.39
MBD3-208ENST00000590830 PRKAR2BP31323 418 aa29.95■■■□□ 2.39
MBD3-208ENST00000590830 U2AF1Q01081 240 aaKnown RBP eCLIP29.95■■■□□ 2.39
MBD3-208ENST00000590830 SLC4A9Q96Q91 983 aa29.95■■■□□ 2.39
MBD3-208ENST00000590830 PTGER2P43116 358 aa29.94■■■□□ 2.38
MBD3-208ENST00000590830 ITPK1Q13572 414 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms