RNA–Protein interactions for RNA: ENST00000590654.1

GALNT1-204, Transcript of polypeptide N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene GALNT1, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT1-204ENST00000590654 BCL9O00512 1426 aa11.68□□□□□ -0.54
GALNT1-204ENST00000590654 RGS12O14924 1447 aa11.68□□□□□ -0.54
GALNT1-204ENST00000590654 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
GALNT1-204ENST00000590654 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
GALNT1-204ENST00000590654 RGPD5Q99666 1765 aa11.68□□□□□ -0.54
GALNT1-204ENST00000590654 WDR43Q15061 677 aaKnown RBP eCLIP11.67□□□□□ -0.54
GALNT1-204ENST00000590654 PEAK1Q9H792 1746 aa11.67□□□□□ -0.54
GALNT1-204ENST00000590654 C1orf141Q5JVX7 400 aa11.67□□□□□ -0.54
GALNT1-204ENST00000590654 IFNL2Q8IZJ0 200 aa11.67□□□□□ -0.54
GALNT1-204ENST00000590654 TNS2Q63HR2 1409 aa11.67□□□□□ -0.54
GALNT1-204ENST00000590654 THSD7AQ9UPZ6 1657 aa11.65□□□□□ -0.54
GALNT1-204ENST00000590654 SOCS7O14512 581 aa11.65□□□□□ -0.54
GALNT1-204ENST00000590654 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
GALNT1-204ENST00000590654 USHBP1Q8N6Y0 703 aa11.65□□□□□ -0.54
GALNT1-204ENST00000590654 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
GALNT1-204ENST00000590654 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
GALNT1-204ENST00000590654 PARP4Q9UKK3 1724 aaKnown RBP11.65□□□□□ -0.54
GALNT1-204ENST00000590654 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
GALNT1-204ENST00000590654 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
GALNT1-204ENST00000590654 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
GALNT1-204ENST00000590654 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
GALNT1-204ENST00000590654 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
GALNT1-204ENST00000590654 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
GALNT1-204ENST00000590654 MARCH10Q8NA82 808 aaPredicted RBP11.63□□□□□ -0.55
GALNT1-204ENST00000590654 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
GALNT1-204ENST00000590654 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
GALNT1-204ENST00000590654 COL3A1P02461 1466 aaPredicted RBP11.62□□□□□ -0.55
GALNT1-204ENST00000590654 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
GALNT1-204ENST00000590654 HMOX1P09601 288 aa11.62□□□□□ -0.55
GALNT1-204ENST00000590654 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
GALNT1-204ENST00000590654 BAG6P46379 1132 aa11.61□□□□□ -0.55
GALNT1-204ENST00000590654 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
GALNT1-204ENST00000590654 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
GALNT1-204ENST00000590654 MEGF6O75095 1541 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 PHKG2P15735 406 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 PRKAR2BP31323 418 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
GALNT1-204ENST00000590654 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
GALNT1-204ENST00000590654 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
GALNT1-204ENST00000590654 PLSCR1O15162 318 aa11.59□□□□□ -0.55
GALNT1-204ENST00000590654 CYP27B1O15528 508 aa11.59□□□□□ -0.55
GALNT1-204ENST00000590654 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
GALNT1-204ENST00000590654 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
GALNT1-204ENST00000590654 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
GALNT1-204ENST00000590654 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
GALNT1-204ENST00000590654 RGPD1P0DJD0 1748 aa11.58□□□□□ -0.55
GALNT1-204ENST00000590654 TRIM37O94972 964 aa11.58□□□□□ -0.56
GALNT1-204ENST00000590654 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
GALNT1-204ENST00000590654 LRRC37A3O60309 1634 aa11.57□□□□□ -0.56
GALNT1-204ENST00000590654 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
GALNT1-204ENST00000590654 APBA3O96018 575 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
GALNT1-204ENST00000590654 CABP4P57796 275 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
GALNT1-204ENST00000590654 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
GALNT1-204ENST00000590654 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 SYTL4Q96C24 671 aaPredicted RBP11.56□□□□□ -0.56
GALNT1-204ENST00000590654 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 BRWD3Q6RI45 1802 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
GALNT1-204ENST00000590654 TEFQ10587 303 aa11.55□□□□□ -0.56
GALNT1-204ENST00000590654 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
GALNT1-204ENST00000590654 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
GALNT1-204ENST00000590654 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
GALNT1-204ENST00000590654 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
GALNT1-204ENST00000590654 FAM182BQ5T319 152 aa11.54□□□□□ -0.56
GALNT1-204ENST00000590654 EP400Q96L91 3159 aa11.54□□□□□ -0.56
GALNT1-204ENST00000590654 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
GALNT1-204ENST00000590654 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
GALNT1-204ENST00000590654 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
GALNT1-204ENST00000590654 MPRIPQ6WCQ1 1025 aa11.53□□□□□ -0.56
GALNT1-204ENST00000590654 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
GALNT1-204ENST00000590654 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
GALNT1-204ENST00000590654 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
GALNT1-204ENST00000590654 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
GALNT1-204ENST00000590654 TMPOP42166 694 aaKnown RBP11.51□□□□□ -0.57
GALNT1-204ENST00000590654 RIPK4P57078 832 aa11.51□□□□□ -0.57
GALNT1-204ENST00000590654 KCNQ2O43526 872 aa11.51□□□□□ -0.57
GALNT1-204ENST00000590654 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
GALNT1-204ENST00000590654 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
GALNT1-204ENST00000590654 PIGBQ92521 554 aa11.51□□□□□ -0.57
GALNT1-204ENST00000590654 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
GALNT1-204ENST00000590654 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
GALNT1-204ENST00000590654 CAMKK2Q96RR4 588 aa11.5□□□□□ -0.57
GALNT1-204ENST00000590654 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
GALNT1-204ENST00000590654 CEMIPQ8WUJ3 1361 aa11.5□□□□□ -0.57
GALNT1-204ENST00000590654 TTC5Q8N0Z6 440 aa11.49□□□□□ -0.57
GALNT1-204ENST00000590654 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
GALNT1-204ENST00000590654 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
GALNT1-204ENST00000590654 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
GALNT1-204ENST00000590654 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
GALNT1-204ENST00000590654 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
GALNT1-204ENST00000590654 LGR6Q9HBX8 967 aa11.48□□□□□ -0.57
GALNT1-204ENST00000590654 APAF1O14727 1248 aa11.47□□□□□ -0.57
GALNT1-204ENST00000590654 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
GALNT1-204ENST00000590654 SBF2Q86WG5 1849 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms