RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 TUBGCP6Q96RT7 1819 aa15.82■□□□□ 0.12
ZNF540-209ENST00000590588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.12
ZNF540-209ENST00000590588 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
ZNF540-209ENST00000590588 USP47Q96K76 1375 aa15.8■□□□□ 0.12
ZNF540-209ENST00000590588 ADRA2BP18089 450 aa15.8■□□□□ 0.12
ZNF540-209ENST00000590588 NSD2O96028 1365 aa15.79■□□□□ 0.12
ZNF540-209ENST00000590588 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
ZNF540-209ENST00000590588 COL13A1Q5TAT6 717 aaPredicted RBP15.79■□□□□ 0.12
ZNF540-209ENST00000590588 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
ZNF540-209ENST00000590588 LY75O60449 1722 aa15.78■□□□□ 0.12
ZNF540-209ENST00000590588 CAPN15O75808 1086 aa15.78■□□□□ 0.12
ZNF540-209ENST00000590588 NME9Q86XW9 330 aa15.78■□□□□ 0.12
ZNF540-209ENST00000590588 IP6K1Q92551 441 aa15.78■□□□□ 0.12
ZNF540-209ENST00000590588 WWC3Q9ULE0 1092 aa15.77■□□□□ 0.12
ZNF540-209ENST00000590588 LTV1Q96GA3 475 aaPredicted RBP15.76■□□□□ 0.11
ZNF540-209ENST00000590588 PRELPP51888 382 aa15.75■□□□□ 0.11
ZNF540-209ENST00000590588 TNS4Q8IZW8 715 aa15.75■□□□□ 0.11
ZNF540-209ENST00000590588 KLRG1Q96E93 195 aa15.75■□□□□ 0.11
ZNF540-209ENST00000590588 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
ZNF540-209ENST00000590588 LTN1O94822 1766 aa15.72■□□□□ 0.11
ZNF540-209ENST00000590588 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
ZNF540-209ENST00000590588 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
ZNF540-209ENST00000590588 SBNO2Q9Y2G9 1366 aa15.72■□□□□ 0.11
ZNF540-209ENST00000590588 AK7Q96M32 723 aa15.71■□□□□ 0.11
ZNF540-209ENST00000590588 DOT1LQ8TEK3 1739 aa15.71■□□□□ 0.1
ZNF540-209ENST00000590588 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
ZNF540-209ENST00000590588 NMRK2Q9NPI5 230 aa15.7■□□□□ 0.1
ZNF540-209ENST00000590588 USP54Q70EL1 1684 aa15.7■□□□□ 0.1
ZNF540-209ENST00000590588 CGNL1Q0VF96 1302 aa15.69■□□□□ 0.1
ZNF540-209ENST00000590588 FSTL1Q12841 308 aa15.69■□□□□ 0.1
ZNF540-209ENST00000590588 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
ZNF540-209ENST00000590588 PCNTO95613 3336 aa15.68■□□□□ 0.1
ZNF540-209ENST00000590588 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
ZNF540-209ENST00000590588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
ZNF540-209ENST00000590588 PHF14O94880 888 aa15.68■□□□□ 0.1
ZNF540-209ENST00000590588 HTRA3P83110 453 aa15.68■□□□□ 0.1
ZNF540-209ENST00000590588 MON2Q7Z3U7 1717 aa15.68■□□□□ 0.1
ZNF540-209ENST00000590588 HOXC9P31274 260 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 AMPHP49418 695 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 TGFB2P61812 414 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
ZNF540-209ENST00000590588 NSD3Q9BZ95 1437 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 C5P01031 1676 aa15.67■□□□□ 0.1
ZNF540-209ENST00000590588 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
ZNF540-209ENST00000590588 SSFA2P28290 1259 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 TERF2IPQ9NYB0 399 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 BCS1LQ9Y276 419 aa15.66■□□□□ 0.1
ZNF540-209ENST00000590588 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
ZNF540-209ENST00000590588 WDR90Q96KV7 1748 aa15.65■□□□□ 0.1
ZNF540-209ENST00000590588 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
ZNF540-209ENST00000590588 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
ZNF540-209ENST00000590588 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
ZNF540-209ENST00000590588 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
ZNF540-209ENST00000590588 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
ZNF540-209ENST00000590588 MEGF6O75095 1541 aa15.64■□□□□ 0.09
ZNF540-209ENST00000590588 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
ZNF540-209ENST00000590588 MAP3K19Q56UN5 1328 aa15.64■□□□□ 0.09
ZNF540-209ENST00000590588 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
ZNF540-209ENST00000590588 NBPF6Q5VWK0 638 aa15.63■□□□□ 0.09
ZNF540-209ENST00000590588 COG3Q96JB2 828 aa15.63■□□□□ 0.09
ZNF540-209ENST00000590588 NBPF4Q96M43 638 aa15.63■□□□□ 0.09
ZNF540-209ENST00000590588 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
ZNF540-209ENST00000590588 C4BP0C0L5 1744 aa15.62■□□□□ 0.09
ZNF540-209ENST00000590588 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
ZNF540-209ENST00000590588 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
ZNF540-209ENST00000590588 MMP10P09238 476 aa15.61■□□□□ 0.09
ZNF540-209ENST00000590588 KDM2BQ8NHM5 1336 aa15.61■□□□□ 0.09
ZNF540-209ENST00000590588 TAF1LQ8IZX4 1826 aa15.61■□□□□ 0.09
ZNF540-209ENST00000590588 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
ZNF540-209ENST00000590588 FCHSD2O94868 740 aa15.6■□□□□ 0.09
ZNF540-209ENST00000590588 FBLN1P23142 703 aa15.6■□□□□ 0.09
ZNF540-209ENST00000590588 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
ZNF540-209ENST00000590588 USHBP1Q8N6Y0 703 aa15.6■□□□□ 0.09
ZNF540-209ENST00000590588 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
ZNF540-209ENST00000590588 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
ZNF540-209ENST00000590588 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 GNPATO15228 680 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 SIK1P57059 783 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 NLGN1Q8N2Q7 840 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 SMC1BQ8NDV3 1235 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 PIGBQ92521 554 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.08
ZNF540-209ENST00000590588 RRAGCQ9HB90 399 aa15.58■□□□□ 0.08
ZNF540-209ENST00000590588 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
ZNF540-209ENST00000590588 CYP27B1O15528 508 aa15.57■□□□□ 0.08
ZNF540-209ENST00000590588 HSPA1AP0DMV8 641 aaKnown RBP15.57■□□□□ 0.08
ZNF540-209ENST00000590588 HSPA1BP0DMV9 641 aaKnown RBP15.57■□□□□ 0.08
ZNF540-209ENST00000590588 DPEP1P16444 411 aa15.57■□□□□ 0.08
ZNF540-209ENST00000590588 CCDC87Q9NVE4 849 aa15.57■□□□□ 0.08
ZNF540-209ENST00000590588 TMF1P82094 1093 aa15.56■□□□□ 0.08
ZNF540-209ENST00000590588 TOGARAM1Q9Y4F4 1720 aa15.56■□□□□ 0.08
ZNF540-209ENST00000590588 RGPD2P0DJD1 1756 aa15.55■□□□□ 0.08
ZNF540-209ENST00000590588 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
ZNF540-209ENST00000590588 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
ZNF540-209ENST00000590588 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms