RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
SMARCA4-215ENST00000590574 VAMP4O75379 141 aa20.55■□□□□ 0.88
SMARCA4-215ENST00000590574 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
SMARCA4-215ENST00000590574 ZSCAN30Q86W11 494 aa20.55■□□□□ 0.88
SMARCA4-215ENST00000590574 NEUROD6Q96NK8 337 aa20.55■□□□□ 0.88
SMARCA4-215ENST00000590574 ATP10AO60312 1499 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 RBM10P98175 930 aaKnown RBP20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 NLRP2Q9NX02 1062 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 ZRANB1Q9UGI0 708 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 HIP1O00291 1037 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 SYNMO15061 1565 aa20.54■□□□□ 0.88
SMARCA4-215ENST00000590574 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 TSHZ3Q63HK5 1081 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 SIL1Q9H173 461 aa20.53■□□□□ 0.88
SMARCA4-215ENST00000590574 CDK11BP21127 795 aaKnown RBP20.52■□□□□ 0.88
SMARCA4-215ENST00000590574 DNAJC2Q99543 621 aaKnown RBP20.52■□□□□ 0.88
SMARCA4-215ENST00000590574 LRRFIP2Q9Y608 721 aaKnown RBP20.52■□□□□ 0.88
SMARCA4-215ENST00000590574 SDSP20132 328 aa20.52■□□□□ 0.88
SMARCA4-215ENST00000590574 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.88
SMARCA4-215ENST00000590574 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 MEIS3Q99687 375 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 PREX2Q70Z35 1606 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 AACSQ86V21 672 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 PDRG1Q9NUG6 133 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 PPIP5K1Q6PFW1 1433 aa20.51■□□□□ 0.87
SMARCA4-215ENST00000590574 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 PDCP20941 246 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 CDC42BPAQ5VT25 1732 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 CPLX1O14810 134 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 FLIIQ13045 1269 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
SMARCA4-215ENST00000590574 STK3Q13188 491 aa20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 KLHL40Q2TBA0 621 aa20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 ABCC1P33527 1531 aa20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 ADCY10Q96PN6 1610 aa20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
SMARCA4-215ENST00000590574 TAF7Q15545 349 aaPredicted RBP20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 THEMISQ8N1K5 641 aaPredicted RBP20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 SPC24Q8NBT2 197 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 KIF1BPQ96EK5 621 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
SMARCA4-215ENST00000590574 ACEP12821 1306 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 LARP1BQ659C4 914 aaKnown RBP20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 CCDC34Q96HJ3 373 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 TRIM5Q9C035 493 aa20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
SMARCA4-215ENST00000590574 TPM3P06753 285 aa20.46■□□□□ 0.87
SMARCA4-215ENST00000590574 HSP90AB2PQ58FF8 381 aa20.46■□□□□ 0.87
SMARCA4-215ENST00000590574 TRPM2O94759 1503 aa20.46■□□□□ 0.87
SMARCA4-215ENST00000590574 APPP05067 770 aa20.46■□□□□ 0.87
SMARCA4-215ENST00000590574 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 MAP7D2Q96T17 732 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 YTHDC2Q9H6S0 1430 aaKnown RBP20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 UQCRHLA0A096LP55 91 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 UQCRHP07919 91 aa20.45■□□□□ 0.86
SMARCA4-215ENST00000590574 ZSCAN23Q3MJ62 389 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 DCTPP1Q9H773 170 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 ZSCAN31Q96LW9 406 aaPredicted RBP20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 MYL6BP14649 208 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 KRT85P78386 507 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 PLEKHM2Q8IWE5 1019 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 ANKRD1Q15327 319 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
SMARCA4-215ENST00000590574 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
SMARCA4-215ENST00000590574 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
SMARCA4-215ENST00000590574 CPLX2Q6PUV4 134 aaKnown RBP20.43■□□□□ 0.86
SMARCA4-215ENST00000590574 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
SMARCA4-215ENST00000590574 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 CREBRFQ8IUR6 639 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 PDE1AP54750 535 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 TRDNQ13061 729 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 GDPD2Q9HCC8 539 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 GLRX3O76003 335 aaKnown RBP20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 MTERF4Q7Z6M4 381 aaKnown RBP20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 CEP85Q6P2H3 762 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
SMARCA4-215ENST00000590574 TRIM29Q14134 588 aa20.41■□□□□ 0.86
SMARCA4-215ENST00000590574 TMX3Q96JJ7 454 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms