RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
LRP3-203ENST00000590278 ARID3AQ99856 593 aa18.04■□□□□ 0.48
LRP3-203ENST00000590278 EXOC6BQ9Y2D4 811 aa18.04■□□□□ 0.48
LRP3-203ENST00000590278 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
LRP3-203ENST00000590278 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
LRP3-203ENST00000590278 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
LRP3-203ENST00000590278 TRIM6-TRIM34B2RNG4 842 aa18.03■□□□□ 0.48
LRP3-203ENST00000590278 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
LRP3-203ENST00000590278 REC8O95072 547 aa18.03■□□□□ 0.48
LRP3-203ENST00000590278 MSH6P52701 1360 aa18.02■□□□□ 0.48
LRP3-203ENST00000590278 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
LRP3-203ENST00000590278 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
LRP3-203ENST00000590278 ZSCAN30Q86W11 494 aa18.02■□□□□ 0.48
LRP3-203ENST00000590278 PIK3C2BO00750 1634 aa18.02■□□□□ 0.47
LRP3-203ENST00000590278 SYCE3A1L190 88 aa18.01■□□□□ 0.47
LRP3-203ENST00000590278 RPAP2Q8IXW5 612 aaPredicted RBP18.01■□□□□ 0.47
LRP3-203ENST00000590278 RBSNQ9H1K0 784 aa18.01■□□□□ 0.47
LRP3-203ENST00000590278 LMBRD1Q9NUN5 540 aa18.01■□□□□ 0.47
LRP3-203ENST00000590278 RBM10P98175 930 aaKnown RBP18.01■□□□□ 0.47
LRP3-203ENST00000590278 MPNDQ8N594 471 aa18■□□□□ 0.47
LRP3-203ENST00000590278 ANO2Q9NQ90 1003 aa18■□□□□ 0.47
LRP3-203ENST00000590278 R3HCC1Q9Y3T6 440 aaKnown RBP18■□□□□ 0.47
LRP3-203ENST00000590278 ERC2O15083 957 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 HMMRO75330 724 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 FOXO3O43524 673 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
LRP3-203ENST00000590278 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
LRP3-203ENST00000590278 XPCQ01831 940 aaPredicted RBP17.98■□□□□ 0.47
LRP3-203ENST00000590278 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
LRP3-203ENST00000590278 G2E3Q7L622 706 aa17.98■□□□□ 0.47
LRP3-203ENST00000590278 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
LRP3-203ENST00000590278 CCDC61Q9Y6R9 512 aa17.98■□□□□ 0.47
LRP3-203ENST00000590278 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
LRP3-203ENST00000590278 RRP9O43818 475 aaKnown RBP17.97■□□□□ 0.47
LRP3-203ENST00000590278 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
LRP3-203ENST00000590278 PTMAP06454 111 aaKnown RBP17.97■□□□□ 0.47
LRP3-203ENST00000590278 UPF3BQ9BZI7 483 aaKnown RBP17.97■□□□□ 0.47
LRP3-203ENST00000590278 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
LRP3-203ENST00000590278 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
LRP3-203ENST00000590278 GPT2Q8TD30 523 aa17.97■□□□□ 0.47
LRP3-203ENST00000590278 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
LRP3-203ENST00000590278 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.47
LRP3-203ENST00000590278 MAP2P11137 1827 aaKnown RBP17.96■□□□□ 0.47
LRP3-203ENST00000590278 CWC22Q9HCG8 908 aaKnown RBP17.96■□□□□ 0.47
LRP3-203ENST00000590278 RTL1A6NKG5 1358 aa17.95■□□□□ 0.46
LRP3-203ENST00000590278 PPP1R9BQ96SB3 815 aa17.95■□□□□ 0.46
LRP3-203ENST00000590278 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
LRP3-203ENST00000590278 FKBP5Q13451 457 aaPredicted RBP17.95■□□□□ 0.46
LRP3-203ENST00000590278 FAM13BQ9NYF5 915 aa17.95■□□□□ 0.46
LRP3-203ENST00000590278 PDE1AP54750 535 aa17.94■□□□□ 0.46
LRP3-203ENST00000590278 TMEM63CQ9P1W3 806 aa17.94■□□□□ 0.46
LRP3-203ENST00000590278 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
LRP3-203ENST00000590278 ZDHHC9Q9Y397 364 aa17.94■□□□□ 0.46
LRP3-203ENST00000590278 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
LRP3-203ENST00000590278 MAP4K4O95819 1239 aaPredicted RBP17.94■□□□□ 0.46
LRP3-203ENST00000590278 ZNF445P59923 1031 aa17.93■□□□□ 0.46
LRP3-203ENST00000590278 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
LRP3-203ENST00000590278 EDC4Q6P2E9 1401 aaKnown RBP17.93■□□□□ 0.46
LRP3-203ENST00000590278 CHL1O00533 1208 aa17.92■□□□□ 0.46
LRP3-203ENST00000590278 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
LRP3-203ENST00000590278 MCCP23508 829 aa17.92■□□□□ 0.46
LRP3-203ENST00000590278 TPM2P07951 284 aa17.92■□□□□ 0.46
LRP3-203ENST00000590278 LARP6Q9BRS8 491 aaKnown RBP17.92■□□□□ 0.46
LRP3-203ENST00000590278 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
LRP3-203ENST00000590278 ARHGAP31Q2M1Z3 1444 aa17.91■□□□□ 0.46
LRP3-203ENST00000590278 DTNBO60941 627 aa17.91■□□□□ 0.46
LRP3-203ENST00000590278 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
LRP3-203ENST00000590278 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
LRP3-203ENST00000590278 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.91■□□□□ 0.46
LRP3-203ENST00000590278 GNAI2P04899 355 aa17.9■□□□□ 0.46
LRP3-203ENST00000590278 CYP2E1P05181 493 aaPredicted RBP17.9■□□□□ 0.46
LRP3-203ENST00000590278 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
LRP3-203ENST00000590278 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
LRP3-203ENST00000590278 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
LRP3-203ENST00000590278 KIF20BQ96Q89 1820 aa17.89■□□□□ 0.46
LRP3-203ENST00000590278 DNTTIP2Q5QJE6 756 aaKnown RBP17.89■□□□□ 0.45
LRP3-203ENST00000590278 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
LRP3-203ENST00000590278 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 PTPRCP08575 1304 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 METP08581 1390 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 ATP7BP35670 1465 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 ANKRD26Q9UPS8 1709 aa17.89■□□□□ 0.45
LRP3-203ENST00000590278 MX1P20591 662 aa17.88■□□□□ 0.45
LRP3-203ENST00000590278 OFD1O75665 1012 aa17.88■□□□□ 0.45
LRP3-203ENST00000590278 ZMYND15Q9H091 742 aa17.88■□□□□ 0.45
LRP3-203ENST00000590278 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
LRP3-203ENST00000590278 PNMA6EA0A0J9YXQ4 647 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
LRP3-203ENST00000590278 NUTM2GQ5VZR2 741 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 LRSAM1Q6UWE0 723 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 ESYT1Q9BSJ8 1104 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 AMPHP49418 695 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 FAM69CQ0P6D2 419 aa17.87■□□□□ 0.45
LRP3-203ENST00000590278 CPS1P31327 1500 aa17.86■□□□□ 0.45
LRP3-203ENST00000590278 ACEP12821 1306 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms