RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SHANK3Q9BYB0 1731 aa29.33■■■□□ 2.29
LRP3-202ENST00000590275 NUP188Q5SRE5 1749 aa29.32■■■□□ 2.28
LRP3-202ENST00000590275 ZCRB1Q8TBF4 217 aaKnown RBP29.32■■■□□ 2.28
LRP3-202ENST00000590275 EYA1Q99502 592 aa29.32■■■□□ 2.28
LRP3-202ENST00000590275 KNSTRNQ9Y448 316 aa29.32■■■□□ 2.28
LRP3-202ENST00000590275 MAP2P11137 1827 aaKnown RBP29.31■■■□□ 2.28
LRP3-202ENST00000590275 EIF4A2Q14240 407 aaKnown RBP29.31■■■□□ 2.28
LRP3-202ENST00000590275 MORC1Q86VD1 984 aa29.3■■■□□ 2.28
LRP3-202ENST00000590275 NHSQ6T4R5 1651 aa29.29■■■□□ 2.28
LRP3-202ENST00000590275 RAPGEF4Q8WZA2 1011 aa29.26■■■□□ 2.27
LRP3-202ENST00000590275 ANO8Q9HCE9 1232 aaPredicted RBP29.26■■■□□ 2.27
LRP3-202ENST00000590275 TATP17735 454 aaPredicted RBP29.25■■■□□ 2.27
LRP3-202ENST00000590275 RGPD3A6NKT7 1758 aaPredicted RBP29.23■■■□□ 2.27
LRP3-202ENST00000590275 RGPD4Q7Z3J3 1758 aa29.23■■■□□ 2.27
LRP3-202ENST00000590275 CYP27B1O15528 508 aa29.22■■■□□ 2.27
LRP3-202ENST00000590275 PRIM1P49642 420 aaKnown RBP29.22■■■□□ 2.27
LRP3-202ENST00000590275 TXNRD1Q16881 649 aa29.22■■■□□ 2.27
LRP3-202ENST00000590275 CC2D1BQ5T0F9 858 aaKnown RBP29.21■■■□□ 2.27
LRP3-202ENST00000590275 IGSF1Q8N6C5 1336 aa29.19■■■□□ 2.26
LRP3-202ENST00000590275 BTAF1O14981 1849 aa29.17■■■□□ 2.26
LRP3-202ENST00000590275 LRRC4BQ9NT99 713 aa29.16■■■□□ 2.26
LRP3-202ENST00000590275 DOT1LQ8TEK3 1739 aa29.16■■■□□ 2.26
LRP3-202ENST00000590275 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
LRP3-202ENST00000590275 PDGFDQ9GZP0 370 aaPredicted RBP29.15■■■□□ 2.26
LRP3-202ENST00000590275 PCDH11XQ9BZA7 1347 aa29.15■■■□□ 2.26
LRP3-202ENST00000590275 PCDH11YQ9BZA8 1340 aa29.15■■■□□ 2.26
LRP3-202ENST00000590275 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
LRP3-202ENST00000590275 NBPF14Q5TI25 921 aa29.14■■■□□ 2.26
LRP3-202ENST00000590275 AEBP1Q8IUX7 1158 aa29.14■■■□□ 2.26
LRP3-202ENST00000590275 SYTL4Q96C24 671 aaPredicted RBP29.14■■■□□ 2.26
LRP3-202ENST00000590275 IL13P35225 146 aa29.13■■■□□ 2.25
LRP3-202ENST00000590275 MTHFSP49914 203 aa29.13■■■□□ 2.25
LRP3-202ENST00000590275 NPC1L1Q9UHC9 1359 aa29.12■■■□□ 2.25
LRP3-202ENST00000590275 KCNQ4P56696 695 aa29.11■■■□□ 2.25
LRP3-202ENST00000590275 TOGARAM1Q9Y4F4 1720 aa29.09■■■□□ 2.25
LRP3-202ENST00000590275 LRP5O75197 1615 aa29.09■■■□□ 2.25
LRP3-202ENST00000590275 PAPPAQ13219 1627 aa29.09■■■□□ 2.25
LRP3-202ENST00000590275 NKX1-1Q15270 411 aaPredicted RBP29.08■■■□□ 2.25
LRP3-202ENST00000590275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.07■■■□□ 2.24
LRP3-202ENST00000590275 ZNF827Q17R98 1081 aa29.06■■■□□ 2.24
LRP3-202ENST00000590275 SPG7Q9UQ90 795 aa29.06■■■□□ 2.24
LRP3-202ENST00000590275 PHKG2P15735 406 aa29.05■■■□□ 2.24
LRP3-202ENST00000590275 SLC15A2Q16348 729 aa29.05■■■□□ 2.24
LRP3-202ENST00000590275 SULT6B1Q6IMI4 303 aa29.03■■■□□ 2.24
LRP3-202ENST00000590275 COL3A1P02461 1466 aaPredicted RBP29.02■■■□□ 2.24
LRP3-202ENST00000590275 KDRP35968 1356 aa29.01■■■□□ 2.24
LRP3-202ENST00000590275 MPRIPQ6WCQ1 1025 aa29.01■■■□□ 2.23
LRP3-202ENST00000590275 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.23
LRP3-202ENST00000590275 CASZ1Q86V15 1759 aa29.01■■■□□ 2.23
LRP3-202ENST00000590275 PIGBQ92521 554 aa29■■■□□ 2.23
LRP3-202ENST00000590275 STK32BQ9NY57 414 aa29■■■□□ 2.23
LRP3-202ENST00000590275 IFNL2Q8IZJ0 200 aa28.99■■■□□ 2.23
LRP3-202ENST00000590275 AKT1S1Q96B36 256 aa28.99■■■□□ 2.23
LRP3-202ENST00000590275 LY75O60449 1722 aa28.97■■■□□ 2.23
LRP3-202ENST00000590275 SLC27A3Q5K4L6 730 aa28.97■■■□□ 2.23
LRP3-202ENST00000590275 PLEKHG2Q9H7P9 1386 aa28.97■■■□□ 2.23
LRP3-202ENST00000590275 HMOX1P09601 288 aa28.95■■■□□ 2.22
LRP3-202ENST00000590275 KDM6AO15550 1401 aaPredicted RBP28.94■■■□□ 2.22
LRP3-202ENST00000590275 ZBTB7AO95365 584 aa28.94■■■□□ 2.22
LRP3-202ENST00000590275 PLEKHO1Q53GL0 409 aaPredicted RBP28.94■■■□□ 2.22
LRP3-202ENST00000590275 PALLDQ8WX93 1383 aa28.93■■■□□ 2.22
LRP3-202ENST00000590275 DIAPH1O60610 1272 aaKnown RBP28.93■■■□□ 2.22
LRP3-202ENST00000590275 ZNF530Q6P9A1 599 aaPredicted RBP28.93■■■□□ 2.22
LRP3-202ENST00000590275 CCNL1Q9UK58 526 aaPredicted RBP28.93■■■□□ 2.22
LRP3-202ENST00000590275 ITGB4P16144 1822 aa28.92■■■□□ 2.22
LRP3-202ENST00000590275 ASAP1Q9ULH1 1129 aa28.91■■■□□ 2.22
LRP3-202ENST00000590275 PPP2R1AP30153 589 aa28.9■■■□□ 2.22
LRP3-202ENST00000590275 AMOTQ4VCS5 1084 aa28.9■■■□□ 2.22
LRP3-202ENST00000590275 SPON1Q9HCB6 807 aa28.89■■■□□ 2.22
LRP3-202ENST00000590275 PTGER2P43116 358 aa28.88■■■□□ 2.21
LRP3-202ENST00000590275 ATF5Q9Y2D1 282 aaPredicted RBP28.88■■■□□ 2.21
LRP3-202ENST00000590275 PNPLA7Q6ZV29 1317 aa28.88■■■□□ 2.21
LRP3-202ENST00000590275 ATG3Q9NT62 314 aa28.87■■■□□ 2.21
LRP3-202ENST00000590275 TMOD3Q9NYL9 352 aa28.87■■■□□ 2.21
LRP3-202ENST00000590275 DCAF5Q96JK2 942 aa28.86■■■□□ 2.21
LRP3-202ENST00000590275 AMIGO3Q86WK7 504 aa28.85■■■□□ 2.21
LRP3-202ENST00000590275 SGIP1Q9BQI5 828 aa28.84■■■□□ 2.21
LRP3-202ENST00000590275 ERVV-2B6SEH9 535 aa28.83■■■□□ 2.21
LRP3-202ENST00000590275 MTHFSDQ2M296 383 aaKnown RBP28.83■■■□□ 2.21
LRP3-202ENST00000590275 SLC4A9Q96Q91 983 aa28.83■■■□□ 2.21
LRP3-202ENST00000590275 SMIM5Q71RC9 77 aa28.82■■■□□ 2.2
LRP3-202ENST00000590275 SMARCC1Q92922 1105 aaPredicted RBP28.82■■■□□ 2.2
LRP3-202ENST00000590275 TUBGCP6Q96RT7 1819 aa28.82■■■□□ 2.2
LRP3-202ENST00000590275 U2SURPO15042 1029 aaKnown RBP28.81■■■□□ 2.2
LRP3-202ENST00000590275 ITPK1Q13572 414 aa28.81■■■□□ 2.2
LRP3-202ENST00000590275 LGR6Q9HBX8 967 aa28.81■■■□□ 2.2
LRP3-202ENST00000590275 TFCP2L1Q9NZI6 479 aa28.81■■■□□ 2.2
LRP3-202ENST00000590275 LOC102724428A0A0B4J2F2 783 aa28.8■■■□□ 2.2
LRP3-202ENST00000590275 HSP90AB1P08238 724 aaKnown RBP28.8■■■□□ 2.2
LRP3-202ENST00000590275 SIK1P57059 783 aa28.8■■■□□ 2.2
LRP3-202ENST00000590275 C1orf141Q5JVX7 400 aa28.79■■■□□ 2.2
LRP3-202ENST00000590275 LINC00116Q8NCU8 138 aa28.79■■■□□ 2.2
LRP3-202ENST00000590275 MTFR1LQ9H019 292 aa28.79■■■□□ 2.2
LRP3-202ENST00000590275 AKAP4Q5JQC9 854 aa28.78■■■□□ 2.2
LRP3-202ENST00000590275 COL23A1Q86Y22 540 aaPredicted RBP28.78■■■□□ 2.2
LRP3-202ENST00000590275 C5P01031 1676 aa28.77■■■□□ 2.2
LRP3-202ENST00000590275 DDX10Q13206 875 aaKnown RBP28.77■■■□□ 2.2
LRP3-202ENST00000590275 CABP4P57796 275 aa28.76■■■□□ 2.19
LRP3-202ENST00000590275 NFATC2IPQ8NCF5 419 aa28.76■■■□□ 2.19
LRP3-202ENST00000590275 QSER1Q2KHR3 1735 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms