RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
NEDD4L-227ENST00000590020 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
NEDD4L-227ENST00000590020 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
NEDD4L-227ENST00000590020 NSD2O96028 1365 aa18.37■□□□□ 0.53
NEDD4L-227ENST00000590020 ADCY9O60503 1353 aa18.36■□□□□ 0.53
NEDD4L-227ENST00000590020 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
NEDD4L-227ENST00000590020 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
NEDD4L-227ENST00000590020 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
NEDD4L-227ENST00000590020 SBNO2Q9Y2G9 1366 aa18.31■□□□□ 0.52
NEDD4L-227ENST00000590020 CD2APQ9Y5K6 639 aa18.31■□□□□ 0.52
NEDD4L-227ENST00000590020 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
NEDD4L-227ENST00000590020 KIF3CO14782 793 aa18.29■□□□□ 0.52
NEDD4L-227ENST00000590020 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
NEDD4L-227ENST00000590020 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
NEDD4L-227ENST00000590020 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
NEDD4L-227ENST00000590020 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
NEDD4L-227ENST00000590020 USP47Q96K76 1375 aa18.28■□□□□ 0.52
NEDD4L-227ENST00000590020 C5P01031 1676 aa18.28■□□□□ 0.52
NEDD4L-227ENST00000590020 IGSF1Q8N6C5 1336 aa18.27■□□□□ 0.52
NEDD4L-227ENST00000590020 FBLN1P23142 703 aa18.27■□□□□ 0.52
NEDD4L-227ENST00000590020 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
NEDD4L-227ENST00000590020 IP6K1Q92551 441 aa18.27■□□□□ 0.52
NEDD4L-227ENST00000590020 FAM208AQ9UK61 1670 aaKnown RBP18.27■□□□□ 0.52
NEDD4L-227ENST00000590020 MEGF6O75095 1541 aa18.27■□□□□ 0.51
NEDD4L-227ENST00000590020 ROCK2O75116 1388 aaKnown RBP18.27■□□□□ 0.51
NEDD4L-227ENST00000590020 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
NEDD4L-227ENST00000590020 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
NEDD4L-227ENST00000590020 APLP1P51693 650 aa18.23■□□□□ 0.51
NEDD4L-227ENST00000590020 DNAJC5GQ8N7S2 189 aa18.23■□□□□ 0.51
NEDD4L-227ENST00000590020 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
NEDD4L-227ENST00000590020 CAPN15O75808 1086 aa18.22■□□□□ 0.51
NEDD4L-227ENST00000590020 PHF14O94880 888 aa18.22■□□□□ 0.51
NEDD4L-227ENST00000590020 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
NEDD4L-227ENST00000590020 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
NEDD4L-227ENST00000590020 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
NEDD4L-227ENST00000590020 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
NEDD4L-227ENST00000590020 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
NEDD4L-227ENST00000590020 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
NEDD4L-227ENST00000590020 HOXC9P31274 260 aa18.2■□□□□ 0.5
NEDD4L-227ENST00000590020 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
NEDD4L-227ENST00000590020 C4BP0C0L5 1744 aa18.19■□□□□ 0.5
NEDD4L-227ENST00000590020 AMPHP49418 695 aa18.19■□□□□ 0.5
NEDD4L-227ENST00000590020 HTRA3P83110 453 aa18.19■□□□□ 0.5
NEDD4L-227ENST00000590020 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
NEDD4L-227ENST00000590020 COL13A1Q5TAT6 717 aaPredicted RBP18.18■□□□□ 0.5
NEDD4L-227ENST00000590020 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
NEDD4L-227ENST00000590020 AK7Q96M32 723 aa18.18■□□□□ 0.5
NEDD4L-227ENST00000590020 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
NEDD4L-227ENST00000590020 NBPF6Q5VWK0 638 aa18.17■□□□□ 0.5
NEDD4L-227ENST00000590020 NBPF4Q96M43 638 aa18.17■□□□□ 0.5
NEDD4L-227ENST00000590020 TOMM70O94826 608 aa18.16■□□□□ 0.5
NEDD4L-227ENST00000590020 NMRK2Q9NPI5 230 aa18.16■□□□□ 0.5
NEDD4L-227ENST00000590020 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
NEDD4L-227ENST00000590020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
NEDD4L-227ENST00000590020 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
NEDD4L-227ENST00000590020 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
NEDD4L-227ENST00000590020 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
NEDD4L-227ENST00000590020 WDR90Q96KV7 1748 aa18.14■□□□□ 0.49
NEDD4L-227ENST00000590020 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
NEDD4L-227ENST00000590020 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
NEDD4L-227ENST00000590020 COG3Q96JB2 828 aa18.13■□□□□ 0.49
NEDD4L-227ENST00000590020 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
NEDD4L-227ENST00000590020 ITGB4P16144 1822 aa18.12■□□□□ 0.49
NEDD4L-227ENST00000590020 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
NEDD4L-227ENST00000590020 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
NEDD4L-227ENST00000590020 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
NEDD4L-227ENST00000590020 PCDH11XQ9BZA7 1347 aa18.1■□□□□ 0.49
NEDD4L-227ENST00000590020 PCDH11YQ9BZA8 1340 aa18.1■□□□□ 0.49
NEDD4L-227ENST00000590020 LINC00116Q8NCU8 138 aa18.1■□□□□ 0.49
NEDD4L-227ENST00000590020 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
NEDD4L-227ENST00000590020 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
NEDD4L-227ENST00000590020 CYP27B1O15528 508 aa18.09■□□□□ 0.49
NEDD4L-227ENST00000590020 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
NEDD4L-227ENST00000590020 KLRG1Q96E93 195 aa18.09■□□□□ 0.49
NEDD4L-227ENST00000590020 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.49
NEDD4L-227ENST00000590020 MMP10P09238 476 aa18.08■□□□□ 0.48
NEDD4L-227ENST00000590020 PIGBQ92521 554 aa18.08■□□□□ 0.48
NEDD4L-227ENST00000590020 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.48
NEDD4L-227ENST00000590020 SSFA2P28290 1259 aa18.07■□□□□ 0.48
NEDD4L-227ENST00000590020 TNS4Q8IZW8 715 aa18.07■□□□□ 0.48
NEDD4L-227ENST00000590020 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
NEDD4L-227ENST00000590020 GNPATO15228 680 aa18.06■□□□□ 0.48
NEDD4L-227ENST00000590020 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
NEDD4L-227ENST00000590020 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 ITPK1Q13572 414 aa18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 HSP90AB2PQ58FF8 381 aa18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
NEDD4L-227ENST00000590020 LOC102724428A0A0B4J2F2 783 aa18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 SIK1P57059 783 aa18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 JMYQ8N9B5 988 aa18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 RBM46Q8TBY0 533 aaKnown RBP18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
NEDD4L-227ENST00000590020 FCHSD2O94868 740 aa18.03■□□□□ 0.48
NEDD4L-227ENST00000590020 DPEP1P16444 411 aa18.03■□□□□ 0.48
NEDD4L-227ENST00000590020 C9orf131Q5VYM1 1079 aa18.03■□□□□ 0.48
NEDD4L-227ENST00000590020 PRELPP51888 382 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms