RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 RGPD2P0DJD1 1756 aa18.34■□□□□ 0.53
PRKCSH-210ENST00000589990 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
PRKCSH-210ENST00000589990 FAM208AQ9UK61 1670 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-210ENST00000589990 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
PRKCSH-210ENST00000589990 MSH5O43196 834 aa18.31■□□□□ 0.52
PRKCSH-210ENST00000589990 FBLN1P23142 703 aa18.31■□□□□ 0.52
PRKCSH-210ENST00000589990 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
PRKCSH-210ENST00000589990 MEGF6O75095 1541 aa18.3■□□□□ 0.52
PRKCSH-210ENST00000589990 TMC1Q8TDI8 760 aa18.3■□□□□ 0.52
PRKCSH-210ENST00000589990 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
PRKCSH-210ENST00000589990 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
PRKCSH-210ENST00000589990 ZNF526Q8TF50 670 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-210ENST00000589990 IP6K1Q92551 441 aa18.29■□□□□ 0.52
PRKCSH-210ENST00000589990 A0A1W2PP64 1363 aa18.28■□□□□ 0.52
PRKCSH-210ENST00000589990 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-210ENST00000589990 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
PRKCSH-210ENST00000589990 ADCY9O60503 1353 aa18.27■□□□□ 0.51
PRKCSH-210ENST00000589990 C5P01031 1676 aa18.26■□□□□ 0.51
PRKCSH-210ENST00000589990 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
PRKCSH-210ENST00000589990 ZCRB1Q8TBF4 217 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-210ENST00000589990 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-210ENST00000589990 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
PRKCSH-210ENST00000589990 HSPA6P17066 643 aa18.24■□□□□ 0.51
PRKCSH-210ENST00000589990 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
PRKCSH-210ENST00000589990 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
PRKCSH-210ENST00000589990 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-210ENST00000589990 HOXC9P31274 260 aa18.23■□□□□ 0.51
PRKCSH-210ENST00000589990 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
PRKCSH-210ENST00000589990 USP47Q96K76 1375 aa18.22■□□□□ 0.51
PRKCSH-210ENST00000589990 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
PRKCSH-210ENST00000589990 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
PRKCSH-210ENST00000589990 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
PRKCSH-210ENST00000589990 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
PRKCSH-210ENST00000589990 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
PRKCSH-210ENST00000589990 AMPHP49418 695 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 TERF2IPQ9NYB0 399 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 C4BP0C0L5 1744 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
PRKCSH-210ENST00000589990 KIF3CO14782 793 aa18.16■□□□□ 0.5
PRKCSH-210ENST00000589990 COG3Q96JB2 828 aa18.15■□□□□ 0.5
PRKCSH-210ENST00000589990 UBR3Q6ZT12 1888 aa18.15■□□□□ 0.5
PRKCSH-210ENST00000589990 PHF14O94880 888 aa18.14■□□□□ 0.49
PRKCSH-210ENST00000589990 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
PRKCSH-210ENST00000589990 ITGB4P16144 1822 aa18.13■□□□□ 0.49
PRKCSH-210ENST00000589990 CYP27B1O15528 508 aa18.11■□□□□ 0.49
PRKCSH-210ENST00000589990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-210ENST00000589990 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
PRKCSH-210ENST00000589990 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
PRKCSH-210ENST00000589990 AK7Q96M32 723 aa18.1■□□□□ 0.49
PRKCSH-210ENST00000589990 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-210ENST00000589990 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
PRKCSH-210ENST00000589990 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
PRKCSH-210ENST00000589990 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-210ENST00000589990 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 HSP90AB2PQ58FF8 381 aa18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 DNAJC5GQ8N7S2 189 aa18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 TESK2Q96S53 571 aa18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
PRKCSH-210ENST00000589990 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
PRKCSH-210ENST00000589990 PCDH11XQ9BZA7 1347 aa18.07■□□□□ 0.48
PRKCSH-210ENST00000589990 PCDH11YQ9BZA8 1340 aa18.07■□□□□ 0.48
PRKCSH-210ENST00000589990 PIGBQ92521 554 aa18.07■□□□□ 0.48
PRKCSH-210ENST00000589990 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-210ENST00000589990 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-210ENST00000589990 FYB1O15117 783 aa18.05■□□□□ 0.48
PRKCSH-210ENST00000589990 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
PRKCSH-210ENST00000589990 PXDNLA1KZ92 1463 aa18.05■□□□□ 0.48
PRKCSH-210ENST00000589990 ITPK1Q13572 414 aa18.04■□□□□ 0.48
PRKCSH-210ENST00000589990 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-210ENST00000589990 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
PRKCSH-210ENST00000589990 APLP1P51693 650 aa18.03■□□□□ 0.48
PRKCSH-210ENST00000589990 HTRA3P83110 453 aa18.03■□□□□ 0.48
PRKCSH-210ENST00000589990 NMRK2Q9NPI5 230 aa18.03■□□□□ 0.48
PRKCSH-210ENST00000589990 INSRP06213 1382 aa18.03■□□□□ 0.48
PRKCSH-210ENST00000589990 KIF13BQ9NQT8 1826 aa18.02■□□□□ 0.48
PRKCSH-210ENST00000589990 SMARCC1Q92922 1105 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-210ENST00000589990 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 GNPATO15228 680 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 MMP10P09238 476 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 SSFA2P28290 1259 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 SIK1P57059 783 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 WDR90Q96KV7 1748 aa18.01■□□□□ 0.47
PRKCSH-210ENST00000589990 A0A0G2JLW4 131 aa18■□□□□ 0.47
PRKCSH-210ENST00000589990 TOMM70O94826 608 aa18■□□□□ 0.47
PRKCSH-210ENST00000589990 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
PRKCSH-210ENST00000589990 PCNTO95613 3336 aa18■□□□□ 0.47
PRKCSH-210ENST00000589990 BCS1LQ9Y276 419 aa17.99■□□□□ 0.47
PRKCSH-210ENST00000589990 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
PRKCSH-210ENST00000589990 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
PRKCSH-210ENST00000589990 FLT4P35916 1363 aa17.99■□□□□ 0.47
PRKCSH-210ENST00000589990 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
PRKCSH-210ENST00000589990 NKX1-1Q15270 411 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-210ENST00000589990 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-210ENST00000589990 NCAPD2Q15021 1401 aa17.97■□□□□ 0.47
PRKCSH-210ENST00000589990 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-210ENST00000589990 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms