RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 GNAT3A8MTJ3 354 aa22.7■■□□□ 1.22
CXXC1-212ENST00000589940 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
CXXC1-212ENST00000589940 NUTM2BA6NNL0 878 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-212ENST00000589940 NUTM2EB1AL46 878 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-212ENST00000589940 MCM10Q7L590 875 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 NUTM2AQ8IVF1 878 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-212ENST00000589940 CARD10Q9BWT7 1032 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 FANCIQ9NVI1 1328 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-212ENST00000589940 LARP1Q6PKG0 1096 aaKnown RBP22.69■■□□□ 1.22
CXXC1-212ENST00000589940 IFT57Q9NWB7 429 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 MEGF6O75095 1541 aa22.69■■□□□ 1.22
CXXC1-212ENST00000589940 GNAI1P63096 354 aa22.67■■□□□ 1.22
CXXC1-212ENST00000589940 ZNF530Q6P9A1 599 aaPredicted RBP22.67■■□□□ 1.22
CXXC1-212ENST00000589940 TSR2Q969E8 191 aaKnown RBP22.67■■□□□ 1.22
CXXC1-212ENST00000589940 CRB1P82279 1406 aa22.67■■□□□ 1.22
CXXC1-212ENST00000589940 ZNF853P0CG23 659 aa22.66■■□□□ 1.22
CXXC1-212ENST00000589940 HSPA1LP34931 641 aa22.66■■□□□ 1.22
CXXC1-212ENST00000589940 CFAP44Q96MT7 982 aa22.66■■□□□ 1.22
CXXC1-212ENST00000589940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
CXXC1-212ENST00000589940 AKAP4Q5JQC9 854 aa22.65■■□□□ 1.22
CXXC1-212ENST00000589940 PLCH1Q4KWH8 1693 aa22.65■■□□□ 1.22
CXXC1-212ENST00000589940 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
CXXC1-212ENST00000589940 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
CXXC1-212ENST00000589940 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.21
CXXC1-212ENST00000589940 NEFLP07196 543 aa22.63■■□□□ 1.21
CXXC1-212ENST00000589940 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
CXXC1-212ENST00000589940 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
CXXC1-212ENST00000589940 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
CXXC1-212ENST00000589940 LRRC37A3O60309 1634 aa22.62■■□□□ 1.21
CXXC1-212ENST00000589940 IL17REQ8NFR9 667 aa22.62■■□□□ 1.21
CXXC1-212ENST00000589940 MBIPQ9NS73 344 aa22.61■■□□□ 1.21
CXXC1-212ENST00000589940 PKD1L3Q7Z443 1732 aa22.6■■□□□ 1.21
CXXC1-212ENST00000589940 PARP4Q9UKK3 1724 aaKnown RBP22.6■■□□□ 1.21
CXXC1-212ENST00000589940 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
CXXC1-212ENST00000589940 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
CXXC1-212ENST00000589940 IL2RBP14784 551 aa22.6■■□□□ 1.21
CXXC1-212ENST00000589940 EXOSC9Q06265 439 aaKnown RBP22.6■■□□□ 1.21
CXXC1-212ENST00000589940 SLIT2O94813 1529 aa22.6■■□□□ 1.21
CXXC1-212ENST00000589940 NRAPQ86VF7 1730 aa22.6■■□□□ 1.21
CXXC1-212ENST00000589940 CHL1O00533 1208 aa22.59■■□□□ 1.21
CXXC1-212ENST00000589940 NWD2Q9ULI1 1742 aa22.59■■□□□ 1.21
CXXC1-212ENST00000589940 USP35Q9P2H5 1018 aa22.58■■□□□ 1.2
CXXC1-212ENST00000589940 RRP1P56182 461 aaKnown RBP22.57■■□□□ 1.2
CXXC1-212ENST00000589940 LRP6O75581 1613 aa22.57■■□□□ 1.2
CXXC1-212ENST00000589940 PHKG2P15735 406 aa22.56■■□□□ 1.2
CXXC1-212ENST00000589940 MPRIPQ6WCQ1 1025 aa22.56■■□□□ 1.2
CXXC1-212ENST00000589940 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
CXXC1-212ENST00000589940 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
CXXC1-212ENST00000589940 FKBP8Q14318 412 aa22.55■■□□□ 1.2
CXXC1-212ENST00000589940 ZCRB1Q8TBF4 217 aaKnown RBP22.55■■□□□ 1.2
CXXC1-212ENST00000589940 C8orf37Q96NL8 207 aa22.55■■□□□ 1.2
CXXC1-212ENST00000589940 RNMTO43148 476 aaKnown RBP22.54■■□□□ 1.2
CXXC1-212ENST00000589940 BABAM1Q9NWV8 329 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 CYP27B1O15528 508 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 TAF7Q15545 349 aaPredicted RBP22.54■■□□□ 1.2
CXXC1-212ENST00000589940 NGLY1Q96IV0 654 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 PCDH11XQ9BZA7 1347 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 PCDH11YQ9BZA8 1340 aa22.54■■□□□ 1.2
CXXC1-212ENST00000589940 RARSP54136 660 aaKnown RBP22.53■■□□□ 1.2
CXXC1-212ENST00000589940 DISP2A7MBM2 1401 aa22.53■■□□□ 1.2
CXXC1-212ENST00000589940 UNC5CLQ8IV45 518 aa22.52■■□□□ 1.2
CXXC1-212ENST00000589940 MIS18AQ9NYP9 233 aa22.52■■□□□ 1.2
CXXC1-212ENST00000589940 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
CXXC1-212ENST00000589940 TEFQ10587 303 aa22.51■■□□□ 1.19
CXXC1-212ENST00000589940 BCAR3O75815 825 aa22.51■■□□□ 1.19
CXXC1-212ENST00000589940 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
CXXC1-212ENST00000589940 IRX6P78412 446 aaPredicted RBP22.51■■□□□ 1.19
CXXC1-212ENST00000589940 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
CXXC1-212ENST00000589940 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
CXXC1-212ENST00000589940 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
CXXC1-212ENST00000589940 BCL9LQ86UU0 1499 aa22.5■■□□□ 1.19
CXXC1-212ENST00000589940 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
CXXC1-212ENST00000589940 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
CXXC1-212ENST00000589940 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
CXXC1-212ENST00000589940 DCAF5Q96JK2 942 aa22.5■■□□□ 1.19
CXXC1-212ENST00000589940 C8orf58Q8NAV2 365 aa22.49■■□□□ 1.19
CXXC1-212ENST00000589940 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
CXXC1-212ENST00000589940 TSPYL6Q8N831 410 aa22.49■■□□□ 1.19
CXXC1-212ENST00000589940 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
CXXC1-212ENST00000589940 VIRMAQ69YN4 1812 aaKnown RBP22.48■■□□□ 1.19
CXXC1-212ENST00000589940 VAMP4O75379 141 aa22.48■■□□□ 1.19
CXXC1-212ENST00000589940 CDCA7Q9BWT1 371 aaPredicted RBP22.48■■□□□ 1.19
CXXC1-212ENST00000589940 MEX3CQ5U5Q3 659 aaKnown RBP22.47■■□□□ 1.19
CXXC1-212ENST00000589940 SCN11AQ9UI33 1791 aa22.47■■□□□ 1.19
CXXC1-212ENST00000589940 SHANK3Q9BYB0 1731 aa22.47■■□□□ 1.19
CXXC1-212ENST00000589940 PLIN1O60240 522 aa22.47■■□□□ 1.19
CXXC1-212ENST00000589940 WNK3Q9BYP7 1800 aa22.47■■□□□ 1.19
CXXC1-212ENST00000589940 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
CXXC1-212ENST00000589940 VPS72Q15906 364 aa22.46■■□□□ 1.19
CXXC1-212ENST00000589940 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
CXXC1-212ENST00000589940 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
CXXC1-212ENST00000589940 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
CXXC1-212ENST00000589940 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
CXXC1-212ENST00000589940 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
CXXC1-212ENST00000589940 DDX54Q8TDD1 881 aaKnown RBP22.45■■□□□ 1.18
CXXC1-212ENST00000589940 SSH1Q8WYL5 1049 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms