RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
TPM4-211ENST00000589897 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
TPM4-211ENST00000589897 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 IL2RBP14784 551 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 IP6K1Q92551 441 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
TPM4-211ENST00000589897 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM4-211ENST00000589897 ZNF827Q17R98 1081 aa11.5□□□□□ -0.57
TPM4-211ENST00000589897 DNAJC5GQ8N7S2 189 aa11.5□□□□□ -0.57
TPM4-211ENST00000589897 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
TPM4-211ENST00000589897 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
TPM4-211ENST00000589897 FYB1O15117 783 aa11.49□□□□□ -0.57
TPM4-211ENST00000589897 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
TPM4-211ENST00000589897 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
TPM4-211ENST00000589897 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
TPM4-211ENST00000589897 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
TPM4-211ENST00000589897 HOXC9P31274 260 aa11.48□□□□□ -0.57
TPM4-211ENST00000589897 PRELPP51888 382 aa11.48□□□□□ -0.57
TPM4-211ENST00000589897 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
TPM4-211ENST00000589897 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
TPM4-211ENST00000589897 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
TPM4-211ENST00000589897 TNS2Q63HR2 1409 aa11.47□□□□□ -0.57
TPM4-211ENST00000589897 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
TPM4-211ENST00000589897 FBLN1P23142 703 aa11.47□□□□□ -0.57
TPM4-211ENST00000589897 RRS1Q15050 365 aaKnown RBP11.47□□□□□ -0.57
TPM4-211ENST00000589897 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
TPM4-211ENST00000589897 PNPLA7Q6ZV29 1317 aa11.46□□□□□ -0.57
TPM4-211ENST00000589897 CAPN15O75808 1086 aa11.46□□□□□ -0.57
TPM4-211ENST00000589897 TOMM70O94826 608 aa11.46□□□□□ -0.57
TPM4-211ENST00000589897 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
TPM4-211ENST00000589897 TNS4Q8IZW8 715 aa11.46□□□□□ -0.57
TPM4-211ENST00000589897 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.57
TPM4-211ENST00000589897 NSD3Q9BZ95 1437 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 RTL1A6NKG5 1358 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 KIF3CO14782 793 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
TPM4-211ENST00000589897 MSH5O43196 834 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
TPM4-211ENST00000589897 SHANK3Q9BYB0 1731 aa11.45□□□□□ -0.58
TPM4-211ENST00000589897 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
TPM4-211ENST00000589897 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
TPM4-211ENST00000589897 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
TPM4-211ENST00000589897 ZCRB1Q8TBF4 217 aaKnown RBP11.42□□□□□ -0.58
TPM4-211ENST00000589897 SYTL4Q96C24 671 aaPredicted RBP11.42□□□□□ -0.58
TPM4-211ENST00000589897 ADCY9O60503 1353 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 FLT4P35916 1363 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
TPM4-211ENST00000589897 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 USHBP1Q8N6Y0 703 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 KLRG1Q96E93 195 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 INSRP06213 1382 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
TPM4-211ENST00000589897 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
TPM4-211ENST00000589897 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
TPM4-211ENST00000589897 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
TPM4-211ENST00000589897 EMILIN1Q9Y6C2 1016 aa11.4□□□□□ -0.58
TPM4-211ENST00000589897 NHSQ6T4R5 1651 aa11.4□□□□□ -0.59
TPM4-211ENST00000589897 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
TPM4-211ENST00000589897 PANK3Q9H999 370 aa11.39□□□□□ -0.59
TPM4-211ENST00000589897 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
TPM4-211ENST00000589897 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
TPM4-211ENST00000589897 BTAF1O14981 1849 aa11.37□□□□□ -0.59
TPM4-211ENST00000589897 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
TPM4-211ENST00000589897 KCNQ4P56696 695 aa11.37□□□□□ -0.59
TPM4-211ENST00000589897 FSTL1Q12841 308 aa11.37□□□□□ -0.59
TPM4-211ENST00000589897 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
TPM4-211ENST00000589897 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
TPM4-211ENST00000589897 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
TPM4-211ENST00000589897 MEGF6O75095 1541 aa11.36□□□□□ -0.59
TPM4-211ENST00000589897 SLC34A2O95436 690 aa11.36□□□□□ -0.59
TPM4-211ENST00000589897 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
TPM4-211ENST00000589897 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
TPM4-211ENST00000589897 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
TPM4-211ENST00000589897 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
TPM4-211ENST00000589897 NSD2O96028 1365 aa11.34□□□□□ -0.59
TPM4-211ENST00000589897 SPG7Q9UQ90 795 aa11.34□□□□□ -0.59
TPM4-211ENST00000589897 DOT1LQ8TEK3 1739 aa11.34□□□□□ -0.59
TPM4-211ENST00000589897 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
TPM4-211ENST00000589897 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
TPM4-211ENST00000589897 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
TPM4-211ENST00000589897 EYA1Q99502 592 aa11.32□□□□□ -0.6
TPM4-211ENST00000589897 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
TPM4-211ENST00000589897 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
TPM4-211ENST00000589897 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
TPM4-211ENST00000589897 CYP27B1O15528 508 aa11.29□□□□□ -0.6
TPM4-211ENST00000589897 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
TPM4-211ENST00000589897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
TPM4-211ENST00000589897 TGFB2P61812 414 aa11.28□□□□□ -0.6
TPM4-211ENST00000589897 HTRA3P83110 453 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms