RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 PLEKHG2Q9H7P9 1386 aa22.25■■□□□ 1.15
DNMT1-221ENST00000589538 NHSQ6T4R5 1651 aa22.24■■□□□ 1.15
DNMT1-221ENST00000589538 SHANK3Q9BYB0 1731 aa22.24■■□□□ 1.15
DNMT1-221ENST00000589538 MTHFSP49914 203 aa22.24■■□□□ 1.15
DNMT1-221ENST00000589538 RGPD3A6NKT7 1758 aaPredicted RBP22.24■■□□□ 1.15
DNMT1-221ENST00000589538 RGPD4Q7Z3J3 1758 aa22.24■■□□□ 1.15
DNMT1-221ENST00000589538 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
DNMT1-221ENST00000589538 PLSCR1O15162 318 aa22.23■■□□□ 1.15
DNMT1-221ENST00000589538 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
DNMT1-221ENST00000589538 PCDH11XQ9BZA7 1347 aa22.23■■□□□ 1.15
DNMT1-221ENST00000589538 PCDH11YQ9BZA8 1340 aa22.23■■□□□ 1.15
DNMT1-221ENST00000589538 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
DNMT1-221ENST00000589538 PKD1L3Q7Z443 1732 aa22.22■■□□□ 1.15
DNMT1-221ENST00000589538 EZH2Q15910 746 aaKnown RBP22.21■■□□□ 1.15
DNMT1-221ENST00000589538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.154e-7■□□□□ 9.2
DNMT1-221ENST00000589538 KAT6BQ8WYB5 2073 aa22.19■■□□□ 1.14
DNMT1-221ENST00000589538 ACSBG1Q96GR2 724 aa22.19■■□□□ 1.14
DNMT1-221ENST00000589538 RREB1Q92766 1687 aa22.19■■□□□ 1.14
DNMT1-221ENST00000589538 IL13P35225 146 aa22.18■■□□□ 1.14
DNMT1-221ENST00000589538 CNGB1Q14028 1251 aaPredicted RBP22.18■■□□□ 1.14
DNMT1-221ENST00000589538 KCNQ2O43526 872 aa22.16■■□□□ 1.14
DNMT1-221ENST00000589538 DOT1LQ8TEK3 1739 aa22.16■■□□□ 1.14
DNMT1-221ENST00000589538 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
DNMT1-221ENST00000589538 PTF1AQ7RTS3 328 aa22.15■■□□□ 1.14
DNMT1-221ENST00000589538 CFAP53Q96M91 514 aa22.14■■□□□ 1.13
DNMT1-221ENST00000589538 BTAF1O14981 1849 aa22.14■■□□□ 1.13
DNMT1-221ENST00000589538 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.13
DNMT1-221ENST00000589538 KDRP35968 1356 aa22.13■■□□□ 1.13
DNMT1-221ENST00000589538 CYP27B1O15528 508 aa22.13■■□□□ 1.13
DNMT1-221ENST00000589538 AMOTQ4VCS5 1084 aa22.13■■□□□ 1.13
DNMT1-221ENST00000589538 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
DNMT1-221ENST00000589538 NBPF14Q5TI25 921 aa22.13■■□□□ 1.13
DNMT1-221ENST00000589538 NKX1-1Q15270 411 aaPredicted RBP22.12■■□□□ 1.13
DNMT1-221ENST00000589538 SULT6B1Q6IMI4 303 aa22.12■■□□□ 1.13
DNMT1-221ENST00000589538 IFNL2Q8IZJ0 200 aa22.12■■□□□ 1.13
DNMT1-221ENST00000589538 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
DNMT1-221ENST00000589538 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
DNMT1-221ENST00000589538 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
DNMT1-221ENST00000589538 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
DNMT1-221ENST00000589538 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
DNMT1-221ENST00000589538 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
DNMT1-221ENST00000589538 PHKG2P15735 406 aa22.08■■□□□ 1.13
DNMT1-221ENST00000589538 TXNRD1Q16881 649 aa22.08■■□□□ 1.13
DNMT1-221ENST00000589538 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
DNMT1-221ENST00000589538 PROM2Q8N271 834 aa22.06■■□□□ 1.12
DNMT1-221ENST00000589538 NUDCQ9Y266 331 aa22.06■■□□□ 1.12
DNMT1-221ENST00000589538 HMGB2P26583 209 aaKnown RBP22.05■■□□□ 1.12
DNMT1-221ENST00000589538 RALBP1Q15311 655 aa22.05■■□□□ 1.12
DNMT1-221ENST00000589538 C1orf141Q5JVX7 400 aa22.05■■□□□ 1.12
DNMT1-221ENST00000589538 ZNF530Q6P9A1 599 aaPredicted RBP22.05■■□□□ 1.12
DNMT1-221ENST00000589538 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
DNMT1-221ENST00000589538 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
DNMT1-221ENST00000589538 SLC27A3Q5K4L6 730 aa22.04■■□□□ 1.12
DNMT1-221ENST00000589538 ITGB4P16144 1822 aa22.03■■□□□ 1.12
DNMT1-221ENST00000589538 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
DNMT1-221ENST00000589538 HMOX1P09601 288 aa22.03■■□□□ 1.12
DNMT1-221ENST00000589538 PSDA5PKW4 1024 aaPredicted RBP22.02■■□□□ 1.12
DNMT1-221ENST00000589538 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
DNMT1-221ENST00000589538 LY75O60449 1722 aa22.01■■□□□ 1.11
DNMT1-221ENST00000589538 MPRIPQ6WCQ1 1025 aa22.01■■□□□ 1.11
DNMT1-221ENST00000589538 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
DNMT1-221ENST00000589538 ERVV-2B6SEH9 535 aa22■■□□□ 1.11
DNMT1-221ENST00000589538 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
DNMT1-221ENST00000589538 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
DNMT1-221ENST00000589538 STK32BQ9NY57 414 aa21.99■■□□□ 1.11
DNMT1-221ENST00000589538 PIGBQ92521 554 aa21.97■■□□□ 1.11
DNMT1-221ENST00000589538 PAPPAQ13219 1627 aa21.96■■□□□ 1.11
DNMT1-221ENST00000589538 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
DNMT1-221ENST00000589538 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
DNMT1-221ENST00000589538 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
DNMT1-221ENST00000589538 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
DNMT1-221ENST00000589538 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
DNMT1-221ENST00000589538 LRRC4BQ9NT99 713 aa21.95■■□□□ 1.1
DNMT1-221ENST00000589538 CCNL1Q9UK58 526 aaPredicted RBP21.95■■□□□ 1.1
DNMT1-221ENST00000589538 PALLDQ8WX93 1383 aa21.95■■□□□ 1.1
DNMT1-221ENST00000589538 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
DNMT1-221ENST00000589538 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
DNMT1-221ENST00000589538 FCHSD2O94868 740 aa21.93■■□□□ 1.1
DNMT1-221ENST00000589538 CABP4P57796 275 aa21.93■■□□□ 1.1
DNMT1-221ENST00000589538 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
DNMT1-221ENST00000589538 SCN11AQ9UI33 1791 aa21.93■■□□□ 1.1
DNMT1-221ENST00000589538 LRP5O75197 1615 aa21.92■■□□□ 1.1
DNMT1-221ENST00000589538 MTHFSDQ2M296 383 aaKnown RBP21.92■■□□□ 1.1
DNMT1-221ENST00000589538 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
DNMT1-221ENST00000589538 PRKAR2BP31323 418 aa21.9■■□□□ 1.1
DNMT1-221ENST00000589538 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
DNMT1-221ENST00000589538 QSER1Q2KHR3 1735 aa21.89■■□□□ 1.09
DNMT1-221ENST00000589538 NEFMP07197 916 aa21.88■■□□□ 1.09
DNMT1-221ENST00000589538 AKT1S1Q96B36 256 aa21.88■■□□□ 1.09
DNMT1-221ENST00000589538 ATG3Q9NT62 314 aa21.88■■□□□ 1.09
DNMT1-221ENST00000589538 ASAP1Q9ULH1 1129 aa21.88■■□□□ 1.09
DNMT1-221ENST00000589538 C5P01031 1676 aa21.88■■□□□ 1.09
DNMT1-221ENST00000589538 MAP3K5Q99683 1374 aa21.87■■□□□ 1.09
DNMT1-221ENST00000589538 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
DNMT1-221ENST00000589538 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
DNMT1-221ENST00000589538 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
DNMT1-221ENST00000589538 RNMTO43148 476 aaKnown RBP21.87■■□□□ 1.09
DNMT1-221ENST00000589538 SIK1P57059 783 aa21.87■■□□□ 1.09
DNMT1-221ENST00000589538 ADAMTS7Q9UKP4 1686 aa21.87■■□□□ 1.09
DNMT1-221ENST00000589538 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms