RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RGPD2P0DJD1 1756 aa23.88■■□□□ 1.41
H3F3B-207ENST00000589417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.87■■□□□ 1.41
H3F3B-207ENST00000589417 IGSF1Q8N6C5 1336 aa23.86■■□□□ 1.41
H3F3B-207ENST00000589417 DDX54Q8TDD1 881 aaKnown RBP23.86■■□□□ 1.41
H3F3B-207ENST00000589417 MTHFSP49914 203 aa23.85■■□□□ 1.41
H3F3B-207ENST00000589417 EZH2Q15910 746 aaKnown RBP23.85■■□□□ 1.41
H3F3B-207ENST00000589417 PTF1AQ7RTS3 328 aa23.85■■□□□ 1.41
H3F3B-207ENST00000589417 SBF2Q86WG5 1849 aa23.83■■□□□ 1.41
H3F3B-207ENST00000589417 IL13P35225 146 aa23.83■■□□□ 1.41
H3F3B-207ENST00000589417 KCNQ2O43526 872 aa23.82■■□□□ 1.4
H3F3B-207ENST00000589417 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
H3F3B-207ENST00000589417 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
H3F3B-207ENST00000589417 CYP27B1O15528 508 aa23.79■■□□□ 1.4
H3F3B-207ENST00000589417 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
H3F3B-207ENST00000589417 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
H3F3B-207ENST00000589417 KDRP35968 1356 aa23.78■■□□□ 1.4
H3F3B-207ENST00000589417 ACSBG1Q96GR2 724 aa23.78■■□□□ 1.4
H3F3B-207ENST00000589417 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
H3F3B-207ENST00000589417 NHSQ6T4R5 1651 aa23.76■■□□□ 1.39
H3F3B-207ENST00000589417 PROM2Q8N271 834 aa23.76■■□□□ 1.39
H3F3B-207ENST00000589417 RGPD3A6NKT7 1758 aaPredicted RBP23.75■■□□□ 1.39
H3F3B-207ENST00000589417 RGPD4Q7Z3J3 1758 aa23.75■■□□□ 1.39
H3F3B-207ENST00000589417 PKD1L3Q7Z443 1732 aa23.74■■□□□ 1.39
H3F3B-207ENST00000589417 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
H3F3B-207ENST00000589417 PRIM1P49642 420 aaKnown RBP23.74■■□□□ 1.39
H3F3B-207ENST00000589417 AMOTQ4VCS5 1084 aa23.73■■□□□ 1.39
H3F3B-207ENST00000589417 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
H3F3B-207ENST00000589417 RREB1Q92766 1687 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 COL3A1P02461 1466 aaPredicted RBP23.71■■□□□ 1.39
H3F3B-207ENST00000589417 PHKG2P15735 406 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 PPP2R1AP30153 589 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 TXNRD1Q16881 649 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 PLEKHO1Q53GL0 409 aaPredicted RBP23.71■■□□□ 1.39
H3F3B-207ENST00000589417 AEBP1Q8IUX7 1158 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
H3F3B-207ENST00000589417 NBPF14Q5TI25 921 aa23.7■■□□□ 1.38
H3F3B-207ENST00000589417 CNGB1Q14028 1251 aaPredicted RBP23.68■■□□□ 1.38
H3F3B-207ENST00000589417 DDX10Q13206 875 aaKnown RBP23.67■■□□□ 1.38
H3F3B-207ENST00000589417 SYTL4Q96C24 671 aaPredicted RBP23.66■■□□□ 1.38
H3F3B-207ENST00000589417 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
H3F3B-207ENST00000589417 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
H3F3B-207ENST00000589417 SLC27A3Q5K4L6 730 aa23.65■■□□□ 1.38
H3F3B-207ENST00000589417 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.38
H3F3B-207ENST00000589417 R3HDM1Q15032 1099 aaKnown RBP23.64■■□□□ 1.37
H3F3B-207ENST00000589417 BTAF1O14981 1849 aa23.63■■□□□ 1.37
H3F3B-207ENST00000589417 DOT1LQ8TEK3 1739 aa23.62■■□□□ 1.37
H3F3B-207ENST00000589417 SRCAPQ6ZRS2 3230 aa23.62■■□□□ 1.37
H3F3B-207ENST00000589417 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
H3F3B-207ENST00000589417 RALBP1Q15311 655 aa23.62■■□□□ 1.37
H3F3B-207ENST00000589417 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
H3F3B-207ENST00000589417 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
H3F3B-207ENST00000589417 HMOX1P09601 288 aa23.61■■□□□ 1.37
H3F3B-207ENST00000589417 ZNF530Q6P9A1 599 aaPredicted RBP23.61■■□□□ 1.37
H3F3B-207ENST00000589417 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
H3F3B-207ENST00000589417 LRRC4BQ9NT99 713 aa23.61■■□□□ 1.37
H3F3B-207ENST00000589417 MPRIPQ6WCQ1 1025 aa23.6■■□□□ 1.37
H3F3B-207ENST00000589417 PIGBQ92521 554 aa23.6■■□□□ 1.37
H3F3B-207ENST00000589417 NUDCQ9Y266 331 aa23.59■■□□□ 1.37
H3F3B-207ENST00000589417 HMGB2P26583 209 aaKnown RBP23.58■■□□□ 1.37
H3F3B-207ENST00000589417 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.37
H3F3B-207ENST00000589417 KAT6BQ8WYB5 2073 aa23.57■■□□□ 1.36
H3F3B-207ENST00000589417 U2SURPO15042 1029 aaKnown RBP23.57■■□□□ 1.36
H3F3B-207ENST00000589417 SLC15A2Q16348 729 aa23.57■■□□□ 1.36
H3F3B-207ENST00000589417 AKAP4Q5JQC9 854 aa23.57■■□□□ 1.36
H3F3B-207ENST00000589417 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
H3F3B-207ENST00000589417 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
H3F3B-207ENST00000589417 TMOD3Q9NYL9 352 aa23.56■■□□□ 1.36
H3F3B-207ENST00000589417 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
H3F3B-207ENST00000589417 KDM6AO15550 1401 aaPredicted RBP23.55■■□□□ 1.36
H3F3B-207ENST00000589417 MTHFSDQ2M296 383 aaKnown RBP23.54■■□□□ 1.36
H3F3B-207ENST00000589417 RSPH6AQ9H0K4 717 aa23.54■■□□□ 1.36
H3F3B-207ENST00000589417 PAPPAQ13219 1627 aa23.54■■□□□ 1.36
H3F3B-207ENST00000589417 PALLDQ8WX93 1383 aa23.53■■□□□ 1.36
H3F3B-207ENST00000589417 FCHSD2O94868 740 aa23.53■■□□□ 1.36
H3F3B-207ENST00000589417 AKT1S1Q96B36 256 aa23.53■■□□□ 1.36
H3F3B-207ENST00000589417 CCNL1Q9UK58 526 aaPredicted RBP23.52■■□□□ 1.36
H3F3B-207ENST00000589417 LY75O60449 1722 aa23.52■■□□□ 1.36
H3F3B-207ENST00000589417 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
H3F3B-207ENST00000589417 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
H3F3B-207ENST00000589417 ATG3Q9NT62 314 aa23.5■■□□□ 1.35
H3F3B-207ENST00000589417 ITGB4P16144 1822 aa23.49■■□□□ 1.35
H3F3B-207ENST00000589417 U2AF1L5P0DN76 240 aaPredicted RBP23.49■■□□□ 1.35
H3F3B-207ENST00000589417 CABP4P57796 275 aa23.49■■□□□ 1.35
H3F3B-207ENST00000589417 U2AF1Q01081 240 aaKnown RBP eCLIP23.49■■□□□ 1.35
H3F3B-207ENST00000589417 ZNF827Q17R98 1081 aa23.49■■□□□ 1.35
H3F3B-207ENST00000589417 ASAP1Q9ULH1 1129 aa23.49■■□□□ 1.35
H3F3B-207ENST00000589417 PRKAR2BP31323 418 aa23.48■■□□□ 1.35
H3F3B-207ENST00000589417 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
H3F3B-207ENST00000589417 RNMTO43148 476 aaKnown RBP23.47■■□□□ 1.35
H3F3B-207ENST00000589417 KCNQ4P56696 695 aa23.47■■□□□ 1.35
H3F3B-207ENST00000589417 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
H3F3B-207ENST00000589417 LOC102724428A0A0B4J2F2 783 aa23.46■■□□□ 1.35
H3F3B-207ENST00000589417 SIK1P57059 783 aa23.46■■□□□ 1.35
H3F3B-207ENST00000589417 NFATC2IPQ8NCF5 419 aa23.46■■□□□ 1.35
H3F3B-207ENST00000589417 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
H3F3B-207ENST00000589417 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
H3F3B-207ENST00000589417 LRP5O75197 1615 aa23.45■■□□□ 1.34
H3F3B-207ENST00000589417 SLC52A2Q9HAB3 445 aa23.45■■□□□ 1.34
H3F3B-207ENST00000589417 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
H3F3B-207ENST00000589417 PDGFDQ9GZP0 370 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms