RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
CLPTM1-210ENST00000589158 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
CLPTM1-210ENST00000589158 NPC1L1Q9UHC9 1359 aa19.12■□□□□ 0.65
CLPTM1-210ENST00000589158 PLSCR1O15162 318 aa19.12■□□□□ 0.65
CLPTM1-210ENST00000589158 MTHFSP49914 203 aa19.12■□□□□ 0.65
CLPTM1-210ENST00000589158 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-210ENST00000589158 SYTL4Q96C24 671 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-210ENST00000589158 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
CLPTM1-210ENST00000589158 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
CLPTM1-210ENST00000589158 SPG7Q9UQ90 795 aa19.1■□□□□ 0.65
CLPTM1-210ENST00000589158 NCAPD2Q15021 1401 aa19.09■□□□□ 0.65
CLPTM1-210ENST00000589158 IGSF1Q8N6C5 1336 aa19.09■□□□□ 0.65
CLPTM1-210ENST00000589158 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-210ENST00000589158 PRIM1P49642 420 aaKnown RBP19.09■□□□□ 0.65
CLPTM1-210ENST00000589158 NBPF14Q5TI25 921 aa19.09■□□□□ 0.65
CLPTM1-210ENST00000589158 R3HDM1Q15032 1099 aaKnown RBP19.08■□□□□ 0.64
CLPTM1-210ENST00000589158 CYP27B1O15528 508 aa19.07■□□□□ 0.64
CLPTM1-210ENST00000589158 IL13P35225 146 aa19.07■□□□□ 0.64
CLPTM1-210ENST00000589158 TXNRD1Q16881 649 aa19.06■□□□□ 0.64
CLPTM1-210ENST00000589158 SBF2Q86WG5 1849 aa19.06■□□□□ 0.64
CLPTM1-210ENST00000589158 SULT6B1Q6IMI4 303 aa19.05■□□□□ 0.64
CLPTM1-210ENST00000589158 AEBP1Q8IUX7 1158 aa19.05■□□□□ 0.64
CLPTM1-210ENST00000589158 PROM2Q8N271 834 aa19.05■□□□□ 0.64
CLPTM1-210ENST00000589158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.05■□□□□ 0.64
CLPTM1-210ENST00000589158 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
CLPTM1-210ENST00000589158 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
CLPTM1-210ENST00000589158 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
CLPTM1-210ENST00000589158 IFNL2Q8IZJ0 200 aa19.02■□□□□ 0.64
CLPTM1-210ENST00000589158 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
CLPTM1-210ENST00000589158 PHKG2P15735 406 aa19.01■□□□□ 0.63
CLPTM1-210ENST00000589158 MPRIPQ6WCQ1 1025 aa19.01■□□□□ 0.63
CLPTM1-210ENST00000589158 RREB1Q92766 1687 aa19.01■□□□□ 0.63
CLPTM1-210ENST00000589158 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
CLPTM1-210ENST00000589158 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
CLPTM1-210ENST00000589158 CFAP53Q96M91 514 aa19■□□□□ 0.63
CLPTM1-210ENST00000589158 HMOX1P09601 288 aa18.99■□□□□ 0.63
CLPTM1-210ENST00000589158 PPP2R1AP30153 589 aa18.99■□□□□ 0.63
CLPTM1-210ENST00000589158 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-210ENST00000589158 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
CLPTM1-210ENST00000589158 PLEKHG2Q9H7P9 1386 aa18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 NUP188Q5SRE5 1749 aa18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 U2SURPO15042 1029 aaKnown RBP18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 STK32BQ9NY57 414 aa18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 RGPD3A6NKT7 1758 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 RGPD4Q7Z3J3 1758 aa18.98■□□□□ 0.63
CLPTM1-210ENST00000589158 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
CLPTM1-210ENST00000589158 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
CLPTM1-210ENST00000589158 KDRP35968 1356 aa18.97■□□□□ 0.63
CLPTM1-210ENST00000589158 BTAF1O14981 1849 aa18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 LRRC4BQ9NT99 713 aa18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 TMOD3Q9NYL9 352 aa18.95■□□□□ 0.62
CLPTM1-210ENST00000589158 KCNQ4P56696 695 aa18.94■□□□□ 0.62
CLPTM1-210ENST00000589158 SLC15A2Q16348 729 aa18.94■□□□□ 0.62
CLPTM1-210ENST00000589158 PIGBQ92521 554 aa18.94■□□□□ 0.62
CLPTM1-210ENST00000589158 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
CLPTM1-210ENST00000589158 DCAF5Q96JK2 942 aa18.93■□□□□ 0.62
CLPTM1-210ENST00000589158 CCNL1Q9UK58 526 aaPredicted RBP18.93■□□□□ 0.62
CLPTM1-210ENST00000589158 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
CLPTM1-210ENST00000589158 SMARCC1Q92922 1105 aaPredicted RBP18.91■□□□□ 0.62
CLPTM1-210ENST00000589158 PALLDQ8WX93 1383 aa18.91■□□□□ 0.62
CLPTM1-210ENST00000589158 ERVV-2B6SEH9 535 aa18.9■□□□□ 0.62
CLPTM1-210ENST00000589158 CABP4P57796 275 aa18.89■□□□□ 0.61
CLPTM1-210ENST00000589158 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
CLPTM1-210ENST00000589158 AKAP4Q5JQC9 854 aa18.89■□□□□ 0.61
CLPTM1-210ENST00000589158 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
CLPTM1-210ENST00000589158 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.61
CLPTM1-210ENST00000589158 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
CLPTM1-210ENST00000589158 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-210ENST00000589158 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLPTM1-210ENST00000589158 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-210ENST00000589158 PDGFDQ9GZP0 370 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-210ENST00000589158 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-210ENST00000589158 RALBP1Q15311 655 aa18.87■□□□□ 0.61
CLPTM1-210ENST00000589158 ASAP1Q9ULH1 1129 aa18.87■□□□□ 0.61
CLPTM1-210ENST00000589158 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
CLPTM1-210ENST00000589158 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
CLPTM1-210ENST00000589158 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
CLPTM1-210ENST00000589158 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
CLPTM1-210ENST00000589158 SPON1Q9HCB6 807 aa18.85■□□□□ 0.61
CLPTM1-210ENST00000589158 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
CLPTM1-210ENST00000589158 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-210ENST00000589158 NFATC2IPQ8NCF5 419 aa18.84■□□□□ 0.61
CLPTM1-210ENST00000589158 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
CLPTM1-210ENST00000589158 PAPPAQ13219 1627 aa18.83■□□□□ 0.61
CLPTM1-210ENST00000589158 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.6
CLPTM1-210ENST00000589158 SIK1P57059 783 aa18.83■□□□□ 0.6
CLPTM1-210ENST00000589158 GAS2L2Q8NHY3 880 aa18.83■□□□□ 0.6
CLPTM1-210ENST00000589158 LGR6Q9HBX8 967 aa18.83■□□□□ 0.6
CLPTM1-210ENST00000589158 RNMTO43148 476 aaKnown RBP18.82■□□□□ 0.6
CLPTM1-210ENST00000589158 LY75O60449 1722 aa18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 FCHSD2O94868 740 aa18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
CLPTM1-210ENST00000589158 LRP5O75197 1615 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms