RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MSH5O43196 834 aa21.5■■□□□ 1.03
SF3A2-204ENST00000589118 SLC27A3Q5K4L6 730 aa21.5■■□□□ 1.03
SF3A2-204ENST00000589118 A0A1W2PP64 1363 aa21.49■■□□□ 1.03
SF3A2-204ENST00000589118 NSD2O96028 1365 aa21.49■■□□□ 1.03
SF3A2-204ENST00000589118 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
SF3A2-204ENST00000589118 FAM208AQ9UK61 1670 aaKnown RBP21.48■■□□□ 1.03
SF3A2-204ENST00000589118 COL23A1Q86Y22 540 aaPredicted RBP21.48■■□□□ 1.03
SF3A2-204ENST00000589118 CARD11Q9BXL7 1154 aa21.48■■□□□ 1.03
SF3A2-204ENST00000589118 GOLGB1Q14789 3259 aaKnown RBP21.48■■□□□ 1.03
SF3A2-204ENST00000589118 EDC4Q6P2E9 1401 aaKnown RBP21.47■■□□□ 1.03
SF3A2-204ENST00000589118 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
SF3A2-204ENST00000589118 ANKRD36BQ8N2N9 1353 aa21.46■■□□□ 1.03
SF3A2-204ENST00000589118 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
SF3A2-204ENST00000589118 MAP3K19Q56UN5 1328 aa21.45■■□□□ 1.02
SF3A2-204ENST00000589118 MEGF6O75095 1541 aa21.45■■□□□ 1.02
SF3A2-204ENST00000589118 HOXC9P31274 260 aa21.44■■□□□ 1.02
SF3A2-204ENST00000589118 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
SF3A2-204ENST00000589118 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
SF3A2-204ENST00000589118 SMIM5Q71RC9 77 aa21.42■■□□□ 1.02
SF3A2-204ENST00000589118 WWC3Q9ULE0 1092 aa21.42■■□□□ 1.02
SF3A2-204ENST00000589118 AMPHP49418 695 aa21.41■■□□□ 1.02
SF3A2-204ENST00000589118 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
SF3A2-204ENST00000589118 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
SF3A2-204ENST00000589118 RRS1Q15050 365 aaKnown RBP21.39■■□□□ 1.01
SF3A2-204ENST00000589118 IFFO2Q5TF58 517 aa21.39■■□□□ 1.01
SF3A2-204ENST00000589118 C5P01031 1676 aa21.38■■□□□ 1.01
SF3A2-204ENST00000589118 ZNF526Q8TF50 670 aaPredicted RBP21.38■■□□□ 1.01
SF3A2-204ENST00000589118 COG3Q96JB2 828 aa21.38■■□□□ 1.01
SF3A2-204ENST00000589118 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
SF3A2-204ENST00000589118 USP47Q96K76 1375 aa21.36■■□□□ 1.01
SF3A2-204ENST00000589118 GRIN3BO60391 1043 aa21.36■■□□□ 1.01
SF3A2-204ENST00000589118 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
SF3A2-204ENST00000589118 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
SF3A2-204ENST00000589118 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1.01
SF3A2-204ENST00000589118 MPRIPQ6WCQ1 1025 aa21.32■■□□□ 1
SF3A2-204ENST00000589118 TESK2Q96S53 571 aa21.32■■□□□ 1
SF3A2-204ENST00000589118 CEP350Q5VT06 3117 aa21.32■■□□□ 1
SF3A2-204ENST00000589118 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
SF3A2-204ENST00000589118 ITGB4P16144 1822 aa21.31■■□□□ 1
SF3A2-204ENST00000589118 TOGARAM1Q9Y4F4 1720 aa21.3■■□□□ 1
SF3A2-204ENST00000589118 PHF14O94880 888 aa21.29■■□□□ 1
SF3A2-204ENST00000589118 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
SF3A2-204ENST00000589118 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
SF3A2-204ENST00000589118 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
SF3A2-204ENST00000589118 PALLDQ8WX93 1383 aa21.28■■□□□ 1
SF3A2-204ENST00000589118 FYB1O15117 783 aa21.28■■□□□ 1
SF3A2-204ENST00000589118 TATP17735 454 aaPredicted RBP21.28■■□□□ 1
SF3A2-204ENST00000589118 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
SF3A2-204ENST00000589118 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
SF3A2-204ENST00000589118 C4BP0C0L5 1744 aa21.27■■□□□ 1
SF3A2-204ENST00000589118 CYP27B1O15528 508 aa21.27■■□□□ 1
SF3A2-204ENST00000589118 UBR3Q6ZT12 1888 aa21.26■□□□□ 0.99
SF3A2-204ENST00000589118 IGSF1Q8N6C5 1336 aa21.24■□□□□ 0.99
SF3A2-204ENST00000589118 ADCY9O60503 1353 aa21.23■□□□□ 0.99
SF3A2-204ENST00000589118 AK7Q96M32 723 aa21.23■□□□□ 0.99
SF3A2-204ENST00000589118 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
SF3A2-204ENST00000589118 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
SF3A2-204ENST00000589118 HSPA6P17066 643 aa21.22■□□□□ 0.99
SF3A2-204ENST00000589118 PIGBQ92521 554 aa21.22■□□□□ 0.99
SF3A2-204ENST00000589118 PCDH11XQ9BZA7 1347 aa21.22■□□□□ 0.99
SF3A2-204ENST00000589118 PCDH11YQ9BZA8 1340 aa21.22■□□□□ 0.99
SF3A2-204ENST00000589118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.21■□□□□ 0.99
SF3A2-204ENST00000589118 FLAD1Q8NFF5 587 aa21.21■□□□□ 0.99
SF3A2-204ENST00000589118 CGNL1Q0VF96 1302 aa21.21■□□□□ 0.99
SF3A2-204ENST00000589118 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
SF3A2-204ENST00000589118 LINC00116Q8NCU8 138 aa21.2■□□□□ 0.98
SF3A2-204ENST00000589118 MAP2P11137 1827 aaKnown RBP21.2■□□□□ 0.98
SF3A2-204ENST00000589118 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
SF3A2-204ENST00000589118 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
SF3A2-204ENST00000589118 INSRP06213 1382 aa21.19■□□□□ 0.98
SF3A2-204ENST00000589118 N4BP2Q86UW6 1770 aaPredicted RBP21.16■□□□□ 0.98
SF3A2-204ENST00000589118 PKD1L3Q7Z443 1732 aa21.16■□□□□ 0.98
SF3A2-204ENST00000589118 KIF3CO14782 793 aa21.16■□□□□ 0.98
SF3A2-204ENST00000589118 ITPK1Q13572 414 aa21.16■□□□□ 0.98
SF3A2-204ENST00000589118 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-204ENST00000589118 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-204ENST00000589118 ASAP1Q9ULH1 1129 aa21.15■□□□□ 0.98
SF3A2-204ENST00000589118 FLT4P35916 1363 aa21.14■□□□□ 0.98
SF3A2-204ENST00000589118 LOC102724428A0A0B4J2F2 783 aa21.14■□□□□ 0.97
SF3A2-204ENST00000589118 SIK1P57059 783 aa21.14■□□□□ 0.97
SF3A2-204ENST00000589118 CARD14Q9BXL6 1004 aa21.14■□□□□ 0.97
SF3A2-204ENST00000589118 GNPATO15228 680 aa21.13■□□□□ 0.97
SF3A2-204ENST00000589118 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
SF3A2-204ENST00000589118 ATP6V1AP38606 617 aa21.11■□□□□ 0.97
SF3A2-204ENST00000589118 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
SF3A2-204ENST00000589118 MMP10P09238 476 aa21.1■□□□□ 0.97
SF3A2-204ENST00000589118 SSFA2P28290 1259 aa21.1■□□□□ 0.97
SF3A2-204ENST00000589118 NKX1-1Q15270 411 aaPredicted RBP21.1■□□□□ 0.97
SF3A2-204ENST00000589118 TMF1P82094 1093 aa21.09■□□□□ 0.97
SF3A2-204ENST00000589118 EYA1Q99502 592 aa21.09■□□□□ 0.97
SF3A2-204ENST00000589118 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
SF3A2-204ENST00000589118 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.97
SF3A2-204ENST00000589118 SPG7Q9UQ90 795 aa21.08■□□□□ 0.97
SF3A2-204ENST00000589118 BCS1LQ9Y276 419 aa21.08■□□□□ 0.97
SF3A2-204ENST00000589118 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
SF3A2-204ENST00000589118 KIF13BQ9NQT8 1826 aa21.06■□□□□ 0.96
SF3A2-204ENST00000589118 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
SF3A2-204ENST00000589118 CICQ96RK0 1608 aaPredicted RBP21.06■□□□□ 0.96
SF3A2-204ENST00000589118 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
SF3A2-204ENST00000589118 PHKG2P15735 406 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms