RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.29
KDM4B-208ENST00000589104 GNAI1P63096 354 aa16.83■□□□□ 0.28
KDM4B-208ENST00000589104 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.28
KDM4B-208ENST00000589104 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
KDM4B-208ENST00000589104 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
KDM4B-208ENST00000589104 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
KDM4B-208ENST00000589104 TRAK2O60296 914 aa16.82■□□□□ 0.28
KDM4B-208ENST00000589104 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
KDM4B-208ENST00000589104 PPP1R9BQ96SB3 815 aa16.82■□□□□ 0.28
KDM4B-208ENST00000589104 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
KDM4B-208ENST00000589104 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
KDM4B-208ENST00000589104 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
KDM4B-208ENST00000589104 SLKQ9H2G2 1235 aaPredicted RBP16.81■□□□□ 0.28
KDM4B-208ENST00000589104 GAS2L3Q86XJ1 694 aa16.8■□□□□ 0.28
KDM4B-208ENST00000589104 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
KDM4B-208ENST00000589104 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
KDM4B-208ENST00000589104 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
KDM4B-208ENST00000589104 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
KDM4B-208ENST00000589104 MRE11P49959 708 aa16.79■□□□□ 0.28
KDM4B-208ENST00000589104 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
KDM4B-208ENST00000589104 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
KDM4B-208ENST00000589104 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
KDM4B-208ENST00000589104 TRPM3Q9HCF6 1732 aaPredicted RBP16.78■□□□□ 0.28
KDM4B-208ENST00000589104 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
KDM4B-208ENST00000589104 PTPRCP08575 1304 aa16.78■□□□□ 0.28
KDM4B-208ENST00000589104 GLI3P10071 1580 aa16.78■□□□□ 0.28
KDM4B-208ENST00000589104 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
KDM4B-208ENST00000589104 PANK2Q9BZ23 570 aa16.78■□□□□ 0.28
KDM4B-208ENST00000589104 MRC1P22897 1456 aa16.77■□□□□ 0.28
KDM4B-208ENST00000589104 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
KDM4B-208ENST00000589104 MSH6P52701 1360 aa16.77■□□□□ 0.28
KDM4B-208ENST00000589104 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
KDM4B-208ENST00000589104 ABCC6O95255 1503 aa16.76■□□□□ 0.27
KDM4B-208ENST00000589104 K7ELQ4 463 aaPredicted RBP16.76■□□□□ 0.27
KDM4B-208ENST00000589104 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
KDM4B-208ENST00000589104 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
KDM4B-208ENST00000589104 ANKARQ7Z5J8 1434 aa16.76■□□□□ 0.27
KDM4B-208ENST00000589104 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
KDM4B-208ENST00000589104 ZNF445P59923 1031 aa16.75■□□□□ 0.27
KDM4B-208ENST00000589104 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
KDM4B-208ENST00000589104 NME9Q86XW9 330 aa16.75■□□□□ 0.27
KDM4B-208ENST00000589104 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
KDM4B-208ENST00000589104 PTMSP20962 102 aa16.75■□□□□ 0.27
KDM4B-208ENST00000589104 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
KDM4B-208ENST00000589104 GAS2L2Q8NHY3 880 aa16.74■□□□□ 0.27
KDM4B-208ENST00000589104 MST1RQ04912 1400 aa16.74■□□□□ 0.27
KDM4B-208ENST00000589104 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
KDM4B-208ENST00000589104 GRPEL1Q9HAV7 217 aa16.74■□□□□ 0.27
KDM4B-208ENST00000589104 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
KDM4B-208ENST00000589104 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
KDM4B-208ENST00000589104 ZDHHC9Q9Y397 364 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 GOLGA6L3A6NEY3 463 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 FBLN1P23142 703 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 PDLIM2Q96JY6 352 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
KDM4B-208ENST00000589104 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
KDM4B-208ENST00000589104 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
KDM4B-208ENST00000589104 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
KDM4B-208ENST00000589104 CDC45O75419 566 aa16.72■□□□□ 0.27
KDM4B-208ENST00000589104 SLIT3O75094 1523 aa16.72■□□□□ 0.27
KDM4B-208ENST00000589104 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
KDM4B-208ENST00000589104 KLHL40Q2TBA0 621 aa16.71■□□□□ 0.27
KDM4B-208ENST00000589104 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
KDM4B-208ENST00000589104 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
KDM4B-208ENST00000589104 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
KDM4B-208ENST00000589104 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
KDM4B-208ENST00000589104 HSCBQ8IWL3 235 aa16.71■□□□□ 0.27
KDM4B-208ENST00000589104 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
KDM4B-208ENST00000589104 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
KDM4B-208ENST00000589104 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.71■□□□□ 0.26
KDM4B-208ENST00000589104 STK26Q9P289 416 aa16.71■□□□□ 0.26
KDM4B-208ENST00000589104 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.26
KDM4B-208ENST00000589104 SBNO1A3KN83 1393 aa16.7■□□□□ 0.26
KDM4B-208ENST00000589104 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
KDM4B-208ENST00000589104 RBM10P98175 930 aaKnown RBP16.68■□□□□ 0.26
KDM4B-208ENST00000589104 LMBRD1Q9NUN5 540 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 C5P01031 1676 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 CUL4AQ13619 759 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 RABEP1Q15276 862 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
KDM4B-208ENST00000589104 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
KDM4B-208ENST00000589104 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
KDM4B-208ENST00000589104 TNRQ92752 1358 aa16.67■□□□□ 0.26
KDM4B-208ENST00000589104 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■□□□ 11.5
KDM4B-208ENST00000589104 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
KDM4B-208ENST00000589104 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
KDM4B-208ENST00000589104 PARP4Q9UKK3 1724 aaKnown RBP16.66■□□□□ 0.26
KDM4B-208ENST00000589104 AOX1Q06278 1338 aa16.66■□□□□ 0.26
KDM4B-208ENST00000589104 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
KDM4B-208ENST00000589104 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
KDM4B-208ENST00000589104 HS1BP3Q53T59 392 aa16.65■□□□□ 0.26
KDM4B-208ENST00000589104 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
KDM4B-208ENST00000589104 HTATSF1O43719 755 aaKnown RBP16.65■□□□□ 0.26
KDM4B-208ENST00000589104 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
KDM4B-208ENST00000589104 SCN11AQ9UI33 1791 aa16.65■□□□□ 0.26
KDM4B-208ENST00000589104 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
KDM4B-208ENST00000589104 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms