RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
DNMT1-215ENST00000588913 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
DNMT1-215ENST00000588913 PKD1L3Q7Z443 1732 aa23.72■■□□□ 1.39
DNMT1-215ENST00000588913 IGSF1Q8N6C5 1336 aa23.72■■□□□ 1.39
DNMT1-215ENST00000588913 TRIM37O94972 964 aa23.7■■□□□ 1.38
DNMT1-215ENST00000588913 FAM196AQ6ZSG2 479 aa23.7■■□□□ 1.38
DNMT1-215ENST00000588913 DEFB132Q7Z7B7 95 aa23.7■■□□□ 1.38
DNMT1-215ENST00000588913 DDX54Q8TDD1 881 aaKnown RBP23.67■■□□□ 1.38
DNMT1-215ENST00000588913 ZCRB1Q8TBF4 217 aaKnown RBP23.66■■□□□ 1.38
DNMT1-215ENST00000588913 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
DNMT1-215ENST00000588913 BCL9O00512 1426 aa23.65■■□□□ 1.38
DNMT1-215ENST00000588913 DOT1LQ8TEK3 1739 aa23.65■■□□□ 1.38
DNMT1-215ENST00000588913 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
DNMT1-215ENST00000588913 NHSQ6T4R5 1651 aa23.64■■□□□ 1.38
DNMT1-215ENST00000588913 KCNQ2O43526 872 aa23.64■■□□□ 1.37
DNMT1-215ENST00000588913 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
DNMT1-215ENST00000588913 KDRP35968 1356 aa23.63■■□□□ 1.37
DNMT1-215ENST00000588913 CYP27B1O15528 508 aa23.63■■□□□ 1.37
DNMT1-215ENST00000588913 ACSBG1Q96GR2 724 aa23.63■■□□□ 1.37
DNMT1-215ENST00000588913 DIAPH1O60610 1272 aaKnown RBP23.62■■□□□ 1.37
DNMT1-215ENST00000588913 SULT6B1Q6IMI4 303 aa23.62■■□□□ 1.37
DNMT1-215ENST00000588913 HMOX1P09601 288 aa23.6■■□□□ 1.37
DNMT1-215ENST00000588913 CCDC125Q86Z20 511 aa23.6■■□□□ 1.37
DNMT1-215ENST00000588913 EN1Q05925 392 aaPredicted RBP23.6■■□□□ 1.37
DNMT1-215ENST00000588913 BTAF1O14981 1849 aa23.59■■□□□ 1.37
DNMT1-215ENST00000588913 KAT6BQ8WYB5 2073 aa23.58■■□□□ 1.37
DNMT1-215ENST00000588913 APBA3O96018 575 aa23.56■■□□□ 1.36
DNMT1-215ENST00000588913 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
DNMT1-215ENST00000588913 RREB1Q92766 1687 aa23.55■■□□□ 1.36
DNMT1-215ENST00000588913 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
DNMT1-215ENST00000588913 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
DNMT1-215ENST00000588913 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
DNMT1-215ENST00000588913 ITGB4P16144 1822 aa23.54■■□□□ 1.36
DNMT1-215ENST00000588913 U2SURPO15042 1029 aaKnown RBP23.54■■□□□ 1.36
DNMT1-215ENST00000588913 SF3B2Q13435 895 aaKnown RBP23.54■■□□□ 1.36
DNMT1-215ENST00000588913 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
DNMT1-215ENST00000588913 RALBP1Q15311 655 aa23.53■■□□□ 1.36
DNMT1-215ENST00000588913 PRKRIP1Q9H875 184 aaPredicted RBP23.53■■□□□ 1.36
DNMT1-215ENST00000588913 BAG6P46379 1132 aa23.52■■□□□ 1.36
DNMT1-215ENST00000588913 NUP188Q5SRE5 1749 aa23.52■■□□□ 1.36
DNMT1-215ENST00000588913 PHKG2P15735 406 aa23.52■■□□□ 1.36
DNMT1-215ENST00000588913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
DNMT1-215ENST00000588913 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
DNMT1-215ENST00000588913 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
DNMT1-215ENST00000588913 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
DNMT1-215ENST00000588913 RGPD3A6NKT7 1758 aaPredicted RBP23.5■■□□□ 1.35
DNMT1-215ENST00000588913 RGPD4Q7Z3J3 1758 aa23.5■■□□□ 1.35
DNMT1-215ENST00000588913 PROM2Q8N271 834 aa23.5■■□□□ 1.35
DNMT1-215ENST00000588913 KDM6AO15550 1401 aaPredicted RBP23.49■■□□□ 1.35
DNMT1-215ENST00000588913 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
DNMT1-215ENST00000588913 MYBBP1AQ9BQG0 1328 aaKnown RBP23.49■■□□□ 1.35
DNMT1-215ENST00000588913 VIRMAQ69YN4 1812 aaKnown RBP23.48■■□□□ 1.35
DNMT1-215ENST00000588913 ZNF530Q6P9A1 599 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-215ENST00000588913 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
DNMT1-215ENST00000588913 PLEKHG2Q9H7P9 1386 aa23.47■■□□□ 1.35
DNMT1-215ENST00000588913 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-215ENST00000588913 SYTL4Q96C24 671 aaPredicted RBP23.47■■□□□ 1.35
DNMT1-215ENST00000588913 MTHFSDQ2M296 383 aaKnown RBP23.46■■□□□ 1.35
DNMT1-215ENST00000588913 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
DNMT1-215ENST00000588913 PHACTR3Q96KR7 559 aa23.46■■□□□ 1.35
DNMT1-215ENST00000588913 U2AF1L5P0DN76 240 aaPredicted RBP23.44■■□□□ 1.34
DNMT1-215ENST00000588913 U2AF1Q01081 240 aaKnown RBP eCLIP23.44■■□□□ 1.34
DNMT1-215ENST00000588913 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
DNMT1-215ENST00000588913 SCN11AQ9UI33 1791 aa23.44■■□□□ 1.34
DNMT1-215ENST00000588913 LY75O60449 1722 aa23.44■■□□□ 1.34
DNMT1-215ENST00000588913 PLSCR1O15162 318 aa23.43■■□□□ 1.34
DNMT1-215ENST00000588913 PRKAR2BP31323 418 aa23.43■■□□□ 1.34
DNMT1-215ENST00000588913 AMOTQ4VCS5 1084 aa23.43■■□□□ 1.34
DNMT1-215ENST00000588913 MPRIPQ6WCQ1 1025 aa23.42■■□□□ 1.34
DNMT1-215ENST00000588913 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
DNMT1-215ENST00000588913 ADAMTS7Q9UKP4 1686 aa23.41■■□□□ 1.34
DNMT1-215ENST00000588913 KCNQ4P56696 695 aa23.4■■□□□ 1.34
DNMT1-215ENST00000588913 PIGBQ92521 554 aa23.4■■□□□ 1.34
DNMT1-215ENST00000588913 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
DNMT1-215ENST00000588913 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
DNMT1-215ENST00000588913 TXNRD1Q16881 649 aa23.4■■□□□ 1.34
DNMT1-215ENST00000588913 LGR6Q9HBX8 967 aa23.39■■□□□ 1.33
DNMT1-215ENST00000588913 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
DNMT1-215ENST00000588913 PAPPAQ13219 1627 aa23.38■■□□□ 1.33
DNMT1-215ENST00000588913 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
DNMT1-215ENST00000588913 AKAP4Q5JQC9 854 aa23.36■■□□□ 1.33
DNMT1-215ENST00000588913 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
DNMT1-215ENST00000588913 FCHSD2O94868 740 aa23.35■■□□□ 1.33
DNMT1-215ENST00000588913 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
DNMT1-215ENST00000588913 PLEKHF1Q96S99 279 aa23.35■■□□□ 1.33
DNMT1-215ENST00000588913 DLG5Q8TDM6 1919 aa23.35■■□□□ 1.33
DNMT1-215ENST00000588913 PSDA5PKW4 1024 aaPredicted RBP23.35■■□□□ 1.33
DNMT1-215ENST00000588913 ASAP1Q9ULH1 1129 aa23.34■■□□□ 1.33
DNMT1-215ENST00000588913 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
DNMT1-215ENST00000588913 MRC1P22897 1456 aa23.32■■□□□ 1.32
DNMT1-215ENST00000588913 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
DNMT1-215ENST00000588913 RNMTO43148 476 aaKnown RBP23.32■■□□□ 1.32
DNMT1-215ENST00000588913 SRCAPQ6ZRS2 3230 aa23.32■■□□□ 1.32
DNMT1-215ENST00000588913 PALLDQ8WX93 1383 aa23.31■■□□□ 1.32
DNMT1-215ENST00000588913 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
DNMT1-215ENST00000588913 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
DNMT1-215ENST00000588913 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
DNMT1-215ENST00000588913 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
DNMT1-215ENST00000588913 ATG3Q9NT62 314 aa23.31■■□□□ 1.32
DNMT1-215ENST00000588913 MAP3K5Q99683 1374 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms