RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 RRS1Q15050 365 aaKnown RBP25.24■■□□□ 1.63
GFAP-213ENST00000588640 ATF5Q9Y2D1 282 aaPredicted RBP25.24■■□□□ 1.63
GFAP-213ENST00000588640 DCAF8L1A6NGE4 600 aa25.23■■□□□ 1.63
GFAP-213ENST00000588640 PTGER2P43116 358 aa25.22■■□□□ 1.63
GFAP-213ENST00000588640 FYB1O15117 783 aa25.21■■□□□ 1.63
GFAP-213ENST00000588640 CDCA8Q53HL2 280 aa25.21■■□□□ 1.63
GFAP-213ENST00000588640 SYTL4Q96C24 671 aaPredicted RBP25.21■■□□□ 1.63
GFAP-213ENST00000588640 MTFR1LQ9H019 292 aa25.2■■□□□ 1.62
GFAP-213ENST00000588640 NSD3Q9BZ95 1437 aa25.2■■□□□ 1.62
GFAP-213ENST00000588640 YY1P25490 414 aa25.19■■□□□ 1.62
GFAP-213ENST00000588640 ZNF827Q17R98 1081 aa25.19■■□□□ 1.62
GFAP-213ENST00000588640 USHBP1Q8N6Y0 703 aa25.18■■□□□ 1.62
GFAP-213ENST00000588640 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
GFAP-213ENST00000588640 NSD2O96028 1365 aa25.18■■□□□ 1.62
GFAP-213ENST00000588640 FLT4P35916 1363 aa25.18■■□□□ 1.62
GFAP-213ENST00000588640 UTRNP46939 3433 aa25.17■■□□□ 1.62
GFAP-213ENST00000588640 ZCRB1Q8TBF4 217 aaKnown RBP25.16■■□□□ 1.62
GFAP-213ENST00000588640 NBPF6Q5VWK0 638 aa25.15■■□□□ 1.62
GFAP-213ENST00000588640 NBPF4Q96M43 638 aa25.15■■□□□ 1.62
GFAP-213ENST00000588640 INSRP06213 1382 aa25.15■■□□□ 1.62
GFAP-213ENST00000588640 PRIM1P49642 420 aaKnown RBP25.14■■□□□ 1.62
GFAP-213ENST00000588640 SLC27A3Q5K4L6 730 aa25.14■■□□□ 1.62
GFAP-213ENST00000588640 FHDC1Q9C0D6 1143 aaPredicted RBP25.14■■□□□ 1.62
GFAP-213ENST00000588640 RAPGEF4Q8WZA2 1011 aa25.13■■□□□ 1.61
GFAP-213ENST00000588640 KIF24Q5T7B8 1368 aa25.13■■□□□ 1.61
GFAP-213ENST00000588640 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
GFAP-213ENST00000588640 SGIP1Q9BQI5 828 aa25.12■■□□□ 1.61
GFAP-213ENST00000588640 HSP90AB2PQ58FF8 381 aa25.11■■□□□ 1.61
GFAP-213ENST00000588640 KCNQ4P56696 695 aa25.1■■□□□ 1.61
GFAP-213ENST00000588640 TATP17735 454 aaPredicted RBP25.09■■□□□ 1.61
GFAP-213ENST00000588640 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
GFAP-213ENST00000588640 PCDH11XQ9BZA7 1347 aa25.09■■□□□ 1.61
GFAP-213ENST00000588640 PCDH11YQ9BZA8 1340 aa25.09■■□□□ 1.61
GFAP-213ENST00000588640 UBR3Q6ZT12 1888 aa25.09■■□□□ 1.61
GFAP-213ENST00000588640 ARXQ96QS3 562 aa25.08■■□□□ 1.61
GFAP-213ENST00000588640 SYT17Q9BSW7 474 aa25.08■■□□□ 1.61
GFAP-213ENST00000588640 CARD14Q9BXL6 1004 aa25.08■■□□□ 1.61
GFAP-213ENST00000588640 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
GFAP-213ENST00000588640 C4BP0C0L5 1744 aa25.07■■□□□ 1.6
GFAP-213ENST00000588640 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
GFAP-213ENST00000588640 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
GFAP-213ENST00000588640 PNPLA7Q6ZV29 1317 aa25.07■■□□□ 1.6
GFAP-213ENST00000588640 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
GFAP-213ENST00000588640 GOLGB1Q14789 3259 aaKnown RBP25.06■■□□□ 1.6
GFAP-213ENST00000588640 TFCP2L1Q9NZI6 479 aa25.06■■□□□ 1.6
GFAP-213ENST00000588640 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
GFAP-213ENST00000588640 MAP3K5Q99683 1374 aa25.05■■□□□ 1.6
GFAP-213ENST00000588640 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
GFAP-213ENST00000588640 PPM1GO15355 546 aaPredicted RBP25.03■■□□□ 1.6
GFAP-213ENST00000588640 POLR3GLQ9BT43 218 aa25.03■■□□□ 1.6
GFAP-213ENST00000588640 KLHL34Q8N239 644 aa25.02■■□□□ 1.6
GFAP-213ENST00000588640 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
GFAP-213ENST00000588640 SLC16A10Q8TF71 515 aa25.01■■□□□ 1.59
GFAP-213ENST00000588640 POLD1P28340 1107 aa25■■□□□ 1.59
GFAP-213ENST00000588640 PALLDQ8WX93 1383 aa24.98■■□□□ 1.59
GFAP-213ENST00000588640 CYP27B1O15528 508 aa24.96■■□□□ 1.59
GFAP-213ENST00000588640 MSH5O43196 834 aa24.96■■□□□ 1.59
GFAP-213ENST00000588640 MPRIPQ6WCQ1 1025 aa24.96■■□□□ 1.59
GFAP-213ENST00000588640 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
GFAP-213ENST00000588640 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
GFAP-213ENST00000588640 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
GFAP-213ENST00000588640 SPG7Q9UQ90 795 aa24.91■■□□□ 1.58
GFAP-213ENST00000588640 COL23A1Q86Y22 540 aaPredicted RBP24.9■■□□□ 1.58
GFAP-213ENST00000588640 ZNF831Q5JPB2 1677 aa24.89■■□□□ 1.58
GFAP-213ENST00000588640 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
GFAP-213ENST00000588640 GPR162Q16538 588 aa24.89■■□□□ 1.58
GFAP-213ENST00000588640 EYA1Q99502 592 aa24.89■■□□□ 1.58
GFAP-213ENST00000588640 POLKQ9UBT6 870 aa24.89■■□□□ 1.58
GFAP-213ENST00000588640 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
GFAP-213ENST00000588640 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
GFAP-213ENST00000588640 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
GFAP-213ENST00000588640 NLGN2Q8NFZ4 835 aa24.87■■□□□ 1.57
GFAP-213ENST00000588640 SMARCC1Q92922 1105 aaPredicted RBP24.87■■□□□ 1.57
GFAP-213ENST00000588640 SCN11AQ9UI33 1791 aa24.86■■□□□ 1.57
GFAP-213ENST00000588640 ZNF784Q8NCA9 323 aaPredicted RBP24.86■■□□□ 1.57
GFAP-213ENST00000588640 AK7Q96M32 723 aa24.85■■□□□ 1.57
GFAP-213ENST00000588640 C4AP0C0L4 1744 aa24.85■■□□□ 1.57
GFAP-213ENST00000588640 HMGB2P26583 209 aaKnown RBP24.84■■□□□ 1.57
GFAP-213ENST00000588640 EIF4A2Q14240 407 aaKnown RBP24.84■■□□□ 1.57
GFAP-213ENST00000588640 NKX1-1Q15270 411 aaPredicted RBP24.84■■□□□ 1.57
GFAP-213ENST00000588640 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
GFAP-213ENST00000588640 PIGBQ92521 554 aa24.84■■□□□ 1.57
GFAP-213ENST00000588640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
GFAP-213ENST00000588640 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
GFAP-213ENST00000588640 PANK3Q9H999 370 aa24.82■■□□□ 1.56
GFAP-213ENST00000588640 PLEKHG2Q9H7P9 1386 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 PHKG2P15735 406 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 IFNL2Q8IZJ0 200 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 FLAD1Q8NFF5 587 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 KIF13BQ9NQT8 1826 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 IGSF1Q8N6C5 1336 aa24.81■■□□□ 1.56
GFAP-213ENST00000588640 PHF14O94880 888 aa24.8■■□□□ 1.56
GFAP-213ENST00000588640 MYH14Q7Z406 1995 aaKnown RBP24.79■■□□□ 1.56
GFAP-213ENST00000588640 LOC102724428A0A0B4J2F2 783 aa24.78■■□□□ 1.56
GFAP-213ENST00000588640 SIK1P57059 783 aa24.78■■□□□ 1.56
GFAP-213ENST00000588640 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
GFAP-213ENST00000588640 AMIGO3Q86WK7 504 aa24.77■■□□□ 1.56
GFAP-213ENST00000588640 TJP1Q07157 1748 aa24.76■■□□□ 1.55
GFAP-213ENST00000588640 LINC00116Q8NCU8 138 aa24.76■■□□□ 1.55
GFAP-213ENST00000588640 ASAP1Q9ULH1 1129 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms