RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 NHSQ6T4R5 1651 aa23.4■■□□□ 1.34
RFX1-203ENST00000588520 RREB1Q92766 1687 aa23.38■■□□□ 1.33
RFX1-203ENST00000588520 EIF4A2Q14240 407 aaKnown RBP23.37■■□□□ 1.33
RFX1-203ENST00000588520 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
RFX1-203ENST00000588520 DDX54Q8TDD1 881 aaKnown RBP23.37■■□□□ 1.33
RFX1-203ENST00000588520 EYA1Q99502 592 aa23.37■■□□□ 1.33
RFX1-203ENST00000588520 PCDH11XQ9BZA7 1347 aa23.36■■□□□ 1.33
RFX1-203ENST00000588520 PCDH11YQ9BZA8 1340 aa23.36■■□□□ 1.33
RFX1-203ENST00000588520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
RFX1-203ENST00000588520 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
RFX1-203ENST00000588520 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
RFX1-203ENST00000588520 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
RFX1-203ENST00000588520 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
RFX1-203ENST00000588520 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
RFX1-203ENST00000588520 SPG7Q9UQ90 795 aa23.32■■□□□ 1.32
RFX1-203ENST00000588520 NUP188Q5SRE5 1749 aa23.31■■□□□ 1.32
RFX1-203ENST00000588520 KCNQ2O43526 872 aa23.3■■□□□ 1.32
RFX1-203ENST00000588520 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
RFX1-203ENST00000588520 PTF1AQ7RTS3 328 aa23.3■■□□□ 1.32
RFX1-203ENST00000588520 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
RFX1-203ENST00000588520 MTHFSP49914 203 aa23.28■■□□□ 1.32
RFX1-203ENST00000588520 DOT1LQ8TEK3 1739 aa23.27■■□□□ 1.32
RFX1-203ENST00000588520 BTAF1O14981 1849 aa23.26■■□□□ 1.31
RFX1-203ENST00000588520 IL13P35225 146 aa23.26■■□□□ 1.31
RFX1-203ENST00000588520 KDRP35968 1356 aa23.26■■□□□ 1.31
RFX1-203ENST00000588520 CYP27B1O15528 508 aa23.25■■□□□ 1.31
RFX1-203ENST00000588520 NKX1-1Q15270 411 aaPredicted RBP23.25■■□□□ 1.31
RFX1-203ENST00000588520 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
RFX1-203ENST00000588520 PRIM1P49642 420 aaKnown RBP23.24■■□□□ 1.31
RFX1-203ENST00000588520 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
RFX1-203ENST00000588520 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
RFX1-203ENST00000588520 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
RFX1-203ENST00000588520 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
RFX1-203ENST00000588520 PROM2Q8N271 834 aa23.23■■□□□ 1.31
RFX1-203ENST00000588520 R3HDM1Q15032 1099 aaKnown RBP23.22■■□□□ 1.31
RFX1-203ENST00000588520 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
RFX1-203ENST00000588520 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
RFX1-203ENST00000588520 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
RFX1-203ENST00000588520 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
RFX1-203ENST00000588520 PSDA5PKW4 1024 aaPredicted RBP23.2■■□□□ 1.3
RFX1-203ENST00000588520 HSP90AB1P08238 724 aaKnown RBP23.2■■□□□ 1.3
RFX1-203ENST00000588520 PHKG2P15735 406 aa23.19■■□□□ 1.3
RFX1-203ENST00000588520 SULT6B1Q6IMI4 303 aa23.19■■□□□ 1.3
RFX1-203ENST00000588520 LRP5O75197 1615 aa23.18■■□□□ 1.3
RFX1-203ENST00000588520 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
RFX1-203ENST00000588520 COL3A1P02461 1466 aaPredicted RBP23.17■■□□□ 1.3
RFX1-203ENST00000588520 STK32BQ9NY57 414 aa23.16■■□□□ 1.3
RFX1-203ENST00000588520 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
RFX1-203ENST00000588520 LY75O60449 1722 aa23.15■■□□□ 1.3
RFX1-203ENST00000588520 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
RFX1-203ENST00000588520 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
RFX1-203ENST00000588520 SMARCC1Q92922 1105 aaPredicted RBP23.14■■□□□ 1.29
RFX1-203ENST00000588520 DCAF5Q96JK2 942 aa23.14■■□□□ 1.29
RFX1-203ENST00000588520 SLC15A2Q16348 729 aa23.13■■□□□ 1.29
RFX1-203ENST00000588520 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
RFX1-203ENST00000588520 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
RFX1-203ENST00000588520 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
RFX1-203ENST00000588520 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
RFX1-203ENST00000588520 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
RFX1-203ENST00000588520 ITGB4P16144 1822 aa23.11■■□□□ 1.29
RFX1-203ENST00000588520 ERVV-2B6SEH9 535 aa23.11■■□□□ 1.29
RFX1-203ENST00000588520 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
RFX1-203ENST00000588520 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
RFX1-203ENST00000588520 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
RFX1-203ENST00000588520 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
RFX1-203ENST00000588520 NUDCQ9Y266 331 aa23.09■■□□□ 1.29
RFX1-203ENST00000588520 PALLDQ8WX93 1383 aa23.09■■□□□ 1.29
RFX1-203ENST00000588520 PIGBQ92521 554 aa23.08■■□□□ 1.29
RFX1-203ENST00000588520 AKAP4Q5JQC9 854 aa23.07■■□□□ 1.28
RFX1-203ENST00000588520 SRCAPQ6ZRS2 3230 aa23.06■■□□□ 1.28
RFX1-203ENST00000588520 HMOX1P09601 288 aa23.06■■□□□ 1.28
RFX1-203ENST00000588520 CASZ1Q86V15 1759 aa23.06■■□□□ 1.28
RFX1-203ENST00000588520 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
RFX1-203ENST00000588520 RALBP1Q15311 655 aa23.05■■□□□ 1.28
RFX1-203ENST00000588520 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
RFX1-203ENST00000588520 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
RFX1-203ENST00000588520 SPON1Q9HCB6 807 aa23.04■■□□□ 1.28
RFX1-203ENST00000588520 QSER1Q2KHR3 1735 aa23.04■■□□□ 1.28
RFX1-203ENST00000588520 DDX10Q13206 875 aaKnown RBP23.02■■□□□ 1.28
RFX1-203ENST00000588520 CABP4P57796 275 aa23.01■■□□□ 1.27
RFX1-203ENST00000588520 ZNF827Q17R98 1081 aa23.01■■□□□ 1.27
RFX1-203ENST00000588520 GAS2L2Q8NHY3 880 aa23.01■■□□□ 1.27
RFX1-203ENST00000588520 C5P01031 1676 aa23■■□□□ 1.27
RFX1-203ENST00000588520 LOC102724428A0A0B4J2F2 783 aa22.99■■□□□ 1.27
RFX1-203ENST00000588520 SIK1P57059 783 aa22.99■■□□□ 1.27
RFX1-203ENST00000588520 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
RFX1-203ENST00000588520 SLC16A10Q8TF71 515 aa22.99■■□□□ 1.27
RFX1-203ENST00000588520 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
RFX1-203ENST00000588520 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
RFX1-203ENST00000588520 FCHSD2O94868 740 aa22.98■■□□□ 1.27
RFX1-203ENST00000588520 MTFR1LQ9H019 292 aa22.98■■□□□ 1.27
RFX1-203ENST00000588520 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
RFX1-203ENST00000588520 TFCP2L1Q9NZI6 479 aa22.98■■□□□ 1.27
RFX1-203ENST00000588520 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
RFX1-203ENST00000588520 RSPH6AQ9H0K4 717 aa22.97■■□□□ 1.27
RFX1-203ENST00000588520 ASAP1Q9ULH1 1129 aa22.97■■□□□ 1.27
RFX1-203ENST00000588520 MRC1P22897 1456 aa22.97■■□□□ 1.27
RFX1-203ENST00000588520 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
RFX1-203ENST00000588520 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
RFX1-203ENST00000588520 FLAD1Q8NFF5 587 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms