RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PTF1AQ7RTS3 328 aa14.37□□□□□ -0.11
TPM4-209ENST00000588483 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
TPM4-209ENST00000588483 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
TPM4-209ENST00000588483 ZCRB1Q8TBF4 217 aaKnown RBP14.36□□□□□ -0.11
TPM4-209ENST00000588483 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
TPM4-209ENST00000588483 BTAF1O14981 1849 aa14.36□□□□□ -0.11
TPM4-209ENST00000588483 LRP5O75197 1615 aa14.35□□□□□ -0.11
TPM4-209ENST00000588483 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
TPM4-209ENST00000588483 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
TPM4-209ENST00000588483 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
TPM4-209ENST00000588483 KCNQ2O43526 872 aa14.34□□□□□ -0.11
TPM4-209ENST00000588483 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
TPM4-209ENST00000588483 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
TPM4-209ENST00000588483 EYA1Q99502 592 aa14.34□□□□□ -0.11
TPM4-209ENST00000588483 IGSF1Q8N6C5 1336 aa14.34□□□□□ -0.11
TPM4-209ENST00000588483 PCDH11XQ9BZA7 1347 aa14.34□□□□□ -0.11
TPM4-209ENST00000588483 PCDH11YQ9BZA8 1340 aa14.34□□□□□ -0.11
TPM4-209ENST00000588483 PROM2Q8N271 834 aa14.33□□□□□ -0.12
TPM4-209ENST00000588483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.127e-11■□□□□ 10
TPM4-209ENST00000588483 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
TPM4-209ENST00000588483 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
TPM4-209ENST00000588483 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
TPM4-209ENST00000588483 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
TPM4-209ENST00000588483 CYP27B1O15528 508 aa14.3□□□□□ -0.12
TPM4-209ENST00000588483 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
TPM4-209ENST00000588483 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
TPM4-209ENST00000588483 KDRP35968 1356 aa14.3□□□□□ -0.12
TPM4-209ENST00000588483 LY75O60449 1722 aa14.29□□□□□ -0.12
TPM4-209ENST00000588483 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
TPM4-209ENST00000588483 PSDA5PKW4 1024 aaPredicted RBP14.29□□□□□ -0.12
TPM4-209ENST00000588483 R3HDM1Q15032 1099 aaKnown RBP14.29□□□□□ -0.12
TPM4-209ENST00000588483 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
TPM4-209ENST00000588483 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
TPM4-209ENST00000588483 IL13P35225 146 aa14.27□□□□□ -0.13
TPM4-209ENST00000588483 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.13
TPM4-209ENST00000588483 ITGB4P16144 1822 aa14.27□□□□□ -0.13
TPM4-209ENST00000588483 CASZ1Q86V15 1759 aa14.27□□□□□ -0.13
TPM4-209ENST00000588483 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
TPM4-209ENST00000588483 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
TPM4-209ENST00000588483 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
TPM4-209ENST00000588483 MTHFSP49914 203 aa14.25□□□□□ -0.13
TPM4-209ENST00000588483 SLC27A3Q5K4L6 730 aa14.25□□□□□ -0.13
TPM4-209ENST00000588483 QSER1Q2KHR3 1735 aa14.24□□□□□ -0.13
TPM4-209ENST00000588483 PHKG2P15735 406 aa14.23□□□□□ -0.13
TPM4-209ENST00000588483 SLC15A2Q16348 729 aa14.23□□□□□ -0.13
TPM4-209ENST00000588483 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
TPM4-209ENST00000588483 IFNL2Q8IZJ0 200 aa14.23□□□□□ -0.13
TPM4-209ENST00000588483 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
TPM4-209ENST00000588483 SYTL4Q96C24 671 aaPredicted RBP14.22□□□□□ -0.13
TPM4-209ENST00000588483 PLEKHO1Q53GL0 409 aaPredicted RBP14.21□□□□□ -0.13
TPM4-209ENST00000588483 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.13
TPM4-209ENST00000588483 STK32BQ9NY57 414 aa14.21□□□□□ -0.13
TPM4-209ENST00000588483 SULT6B1Q6IMI4 303 aa14.2□□□□□ -0.14
TPM4-209ENST00000588483 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
TPM4-209ENST00000588483 KDM6AO15550 1401 aaPredicted RBP14.19□□□□□ -0.14
TPM4-209ENST00000588483 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
TPM4-209ENST00000588483 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
TPM4-209ENST00000588483 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
TPM4-209ENST00000588483 DCAF5Q96JK2 942 aa14.19□□□□□ -0.14
TPM4-209ENST00000588483 TAF1LQ8IZX4 1826 aa14.19□□□□□ -0.14
TPM4-209ENST00000588483 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 C5P01031 1676 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 ZNF827Q17R98 1081 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 PIGBQ92521 554 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 SMARCC1Q92922 1105 aaPredicted RBP14.18□□□□□ -0.14
TPM4-209ENST00000588483 PALLDQ8WX93 1383 aa14.18□□□□□ -0.14
TPM4-209ENST00000588483 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
TPM4-209ENST00000588483 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
TPM4-209ENST00000588483 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
TPM4-209ENST00000588483 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
TPM4-209ENST00000588483 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
TPM4-209ENST00000588483 COL24A1Q17RW2 1714 aa14.17□□□□□ -0.14
TPM4-209ENST00000588483 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
TPM4-209ENST00000588483 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
TPM4-209ENST00000588483 SPON1Q9HCB6 807 aa14.16□□□□□ -0.14
TPM4-209ENST00000588483 TMOD3Q9NYL9 352 aa14.16□□□□□ -0.14
TPM4-209ENST00000588483 MRC1P22897 1456 aa14.15□□□□□ -0.14
TPM4-209ENST00000588483 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
TPM4-209ENST00000588483 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
TPM4-209ENST00000588483 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
TPM4-209ENST00000588483 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
TPM4-209ENST00000588483 C4BP0C0L5 1744 aa14.13□□□□□ -0.15
TPM4-209ENST00000588483 CICQ96RK0 1608 aaPredicted RBP14.13□□□□□ -0.15
TPM4-209ENST00000588483 HMOX1P09601 288 aa14.13□□□□□ -0.15
TPM4-209ENST00000588483 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
TPM4-209ENST00000588483 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
TPM4-209ENST00000588483 MTFR1LQ9H019 292 aa14.13□□□□□ -0.15
TPM4-209ENST00000588483 PNPLA7Q6ZV29 1317 aa14.13□□□□□ -0.15
TPM4-209ENST00000588483 PTGER2P43116 358 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 KCNQ4P56696 695 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 SLC16A10Q8TF71 515 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 ATG3Q9NT62 314 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 ASAP1Q9ULH1 1129 aa14.12□□□□□ -0.15
TPM4-209ENST00000588483 LOC102724428A0A0B4J2F2 783 aa14.11□□□□□ -0.15
TPM4-209ENST00000588483 SIK1P57059 783 aa14.11□□□□□ -0.15
TPM4-209ENST00000588483 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
TPM4-209ENST00000588483 CNGB1Q14028 1251 aaPredicted RBP14.1□□□□□ -0.15
TPM4-209ENST00000588483 MTHFSDQ2M296 383 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms