RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 ZCRB1Q8TBF4 217 aaKnown RBP28.78■■■□□ 2.2
NCLN-204ENST00000588428 PSDA5PKW4 1024 aaPredicted RBP28.77■■■□□ 2.2
NCLN-204ENST00000588428 USHBP1Q8N6Y0 703 aa28.77■■■□□ 2.2
NCLN-204ENST00000588428 RAPGEF4Q8WZA2 1011 aa28.77■■■□□ 2.2
NCLN-204ENST00000588428 PPM1GO15355 546 aaPredicted RBP28.76■■■□□ 2.19
NCLN-204ENST00000588428 KCNQ2O43526 872 aa28.76■■■□□ 2.19
NCLN-204ENST00000588428 R3HDM1Q15032 1099 aaKnown RBP28.75■■■□□ 2.19
NCLN-204ENST00000588428 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
NCLN-204ENST00000588428 DDX54Q8TDD1 881 aaKnown RBP28.75■■■□□ 2.19
NCLN-204ENST00000588428 TATP17735 454 aaPredicted RBP28.74■■■□□ 2.19
NCLN-204ENST00000588428 AMER1Q5JTC6 1135 aaPredicted RBP28.74■■■□□ 2.19
NCLN-204ENST00000588428 SRCAPQ6ZRS2 3230 aa28.74■■■□□ 2.19
NCLN-204ENST00000588428 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
NCLN-204ENST00000588428 TNNT2P45379 298 aaPredicted RBP28.72■■■□□ 2.19
NCLN-204ENST00000588428 PROM2Q8N271 834 aa28.72■■■□□ 2.19
NCLN-204ENST00000588428 PLEKHG2Q9H7P9 1386 aa28.72■■■□□ 2.19
NCLN-204ENST00000588428 PER1O15534 1290 aaPredicted RBP28.71■■■□□ 2.19
NCLN-204ENST00000588428 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
NCLN-204ENST00000588428 TXNRD1Q16881 649 aa28.69■■■□□ 2.18
NCLN-204ENST00000588428 EYA1Q99502 592 aa28.69■■■□□ 2.18
NCLN-204ENST00000588428 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
NCLN-204ENST00000588428 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
NCLN-204ENST00000588428 EIF4A2Q14240 407 aaKnown RBP28.68■■■□□ 2.18
NCLN-204ENST00000588428 NPC1L1Q9UHC9 1359 aa28.67■■■□□ 2.18
NCLN-204ENST00000588428 PAPPAQ13219 1627 aa28.67■■■□□ 2.18
NCLN-204ENST00000588428 LY75O60449 1722 aa28.66■■■□□ 2.18
NCLN-204ENST00000588428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.64■■■□□ 2.18
NCLN-204ENST00000588428 CASZ1Q86V15 1759 aa28.64■■■□□ 2.18
NCLN-204ENST00000588428 IGSF1Q8N6C5 1336 aa28.64■■■□□ 2.17
NCLN-204ENST00000588428 ANO8Q9HCE9 1232 aaPredicted RBP28.63■■■□□ 2.17
NCLN-204ENST00000588428 TOGARAM1Q9Y4F4 1720 aa28.63■■■□□ 2.17
NCLN-204ENST00000588428 ITGB4P16144 1822 aa28.62■■■□□ 2.17
NCLN-204ENST00000588428 CYP27B1O15528 508 aa28.61■■■□□ 2.17
NCLN-204ENST00000588428 PRIM1P49642 420 aaKnown RBP28.61■■■□□ 2.17
NCLN-204ENST00000588428 SPG7Q9UQ90 795 aa28.59■■■□□ 2.17
NCLN-204ENST00000588428 NKX1-1Q15270 411 aaPredicted RBP28.58■■■□□ 2.17
NCLN-204ENST00000588428 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
NCLN-204ENST00000588428 SLC27A3Q5K4L6 730 aa28.56■■■□□ 2.16
NCLN-204ENST00000588428 SYTL4Q96C24 671 aaPredicted RBP28.56■■■□□ 2.16
NCLN-204ENST00000588428 STK32BQ9NY57 414 aa28.55■■■□□ 2.16
NCLN-204ENST00000588428 SLC15A2Q16348 729 aa28.54■■■□□ 2.16
NCLN-204ENST00000588428 KDRP35968 1356 aa28.52■■■□□ 2.16
NCLN-204ENST00000588428 LRRC4BQ9NT99 713 aa28.52■■■□□ 2.16
NCLN-204ENST00000588428 IL13P35225 146 aa28.51■■■□□ 2.15
NCLN-204ENST00000588428 CC2D1BQ5T0F9 858 aaKnown RBP28.51■■■□□ 2.15
NCLN-204ENST00000588428 MTHFSP49914 203 aa28.49■■■□□ 2.15
NCLN-204ENST00000588428 IFNL2Q8IZJ0 200 aa28.49■■■□□ 2.15
NCLN-204ENST00000588428 PHKG2P15735 406 aa28.48■■■□□ 2.15
NCLN-204ENST00000588428 TAF1LQ8IZX4 1826 aa28.48■■■□□ 2.15
NCLN-204ENST00000588428 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
NCLN-204ENST00000588428 SPON1Q9HCB6 807 aa28.46■■■□□ 2.15
NCLN-204ENST00000588428 AMOTQ4VCS5 1084 aa28.45■■■□□ 2.14
NCLN-204ENST00000588428 AKT1S1Q96B36 256 aa28.45■■■□□ 2.14
NCLN-204ENST00000588428 C5P01031 1676 aa28.45■■■□□ 2.14
NCLN-204ENST00000588428 PLEKHO1Q53GL0 409 aaPredicted RBP28.44■■■□□ 2.14
NCLN-204ENST00000588428 COL3A1P02461 1466 aaPredicted RBP28.44■■■□□ 2.14
NCLN-204ENST00000588428 ZNF827Q17R98 1081 aa28.43■■■□□ 2.14
NCLN-204ENST00000588428 MPRIPQ6WCQ1 1025 aa28.43■■■□□ 2.14
NCLN-204ENST00000588428 AEBP1Q8IUX7 1158 aa28.43■■■□□ 2.14
NCLN-204ENST00000588428 PALLDQ8WX93 1383 aa28.42■■■□□ 2.14
NCLN-204ENST00000588428 HMGB2P26583 209 aaKnown RBP28.42■■■□□ 2.14
NCLN-204ENST00000588428 SULT6B1Q6IMI4 303 aa28.42■■■□□ 2.14
NCLN-204ENST00000588428 SMARCC1Q92922 1105 aaPredicted RBP28.42■■■□□ 2.14
NCLN-204ENST00000588428 PDGFDQ9GZP0 370 aaPredicted RBP28.42■■■□□ 2.14
NCLN-204ENST00000588428 CCNL1Q9UK58 526 aaPredicted RBP28.42■■■□□ 2.14
NCLN-204ENST00000588428 HSP90AB1P08238 724 aaKnown RBP28.41■■■□□ 2.14
NCLN-204ENST00000588428 PIGBQ92521 554 aa28.4■■■□□ 2.14
NCLN-204ENST00000588428 COL24A1Q17RW2 1714 aa28.39■■■□□ 2.14
NCLN-204ENST00000588428 DIAPH1O60610 1272 aaKnown RBP28.38■■■□□ 2.13
NCLN-204ENST00000588428 SCN11AQ9UI33 1791 aa28.37■■■□□ 2.13
NCLN-204ENST00000588428 ZNF530Q6P9A1 599 aaPredicted RBP28.37■■■□□ 2.13
NCLN-204ENST00000588428 DCAF5Q96JK2 942 aa28.37■■■□□ 2.13
NCLN-204ENST00000588428 TMOD3Q9NYL9 352 aa28.37■■■□□ 2.13
NCLN-204ENST00000588428 VIRMAQ69YN4 1812 aaKnown RBP28.36■■■□□ 2.13
NCLN-204ENST00000588428 KDM6AO15550 1401 aaPredicted RBP28.36■■■□□ 2.13
NCLN-204ENST00000588428 ZNF831Q5JPB2 1677 aa28.36■■■□□ 2.13
NCLN-204ENST00000588428 ERVV-2B6SEH9 535 aa28.36■■■□□ 2.13
NCLN-204ENST00000588428 MTFR1LQ9H019 292 aa28.36■■■□□ 2.13
NCLN-204ENST00000588428 KCNQ4P56696 695 aa28.35■■■□□ 2.13
NCLN-204ENST00000588428 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
NCLN-204ENST00000588428 C4BP0C0L5 1744 aa28.33■■■□□ 2.13
NCLN-204ENST00000588428 PTGER2P43116 358 aa28.32■■■□□ 2.12
NCLN-204ENST00000588428 C1orf141Q5JVX7 400 aa28.32■■■□□ 2.12
NCLN-204ENST00000588428 SLC16A10Q8TF71 515 aa28.32■■■□□ 2.12
NCLN-204ENST00000588428 PNPLA7Q6ZV29 1317 aa28.32■■■□□ 2.12
NCLN-204ENST00000588428 ADAMTS7Q9UKP4 1686 aa28.3■■■□□ 2.12
NCLN-204ENST00000588428 SGIP1Q9BQI5 828 aa28.3■■■□□ 2.12
NCLN-204ENST00000588428 TFCP2L1Q9NZI6 479 aa28.3■■■□□ 2.12
NCLN-204ENST00000588428 PPP1R1BQ9UD71 204 aaPredicted RBP28.3■■■□□ 2.12
NCLN-204ENST00000588428 UBR3Q6ZT12 1888 aa28.29■■■□□ 2.12
NCLN-204ENST00000588428 HMOX1P09601 288 aa28.28■■■□□ 2.12
NCLN-204ENST00000588428 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
NCLN-204ENST00000588428 ASAP1Q9ULH1 1129 aa28.28■■■□□ 2.12
NCLN-204ENST00000588428 LOC102724428A0A0B4J2F2 783 aa28.27■■■□□ 2.12
NCLN-204ENST00000588428 SIK1P57059 783 aa28.27■■■□□ 2.12
NCLN-204ENST00000588428 AKAP4Q5JQC9 854 aa28.27■■■□□ 2.12
NCLN-204ENST00000588428 ATG3Q9NT62 314 aa28.27■■■□□ 2.12
NCLN-204ENST00000588428 ATF5Q9Y2D1 282 aaPredicted RBP28.27■■■□□ 2.12
NCLN-204ENST00000588428 PPP2R1AP30153 589 aa28.26■■■□□ 2.11
NCLN-204ENST00000588428 CFAP53Q96M91 514 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms