RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RREB1Q92766 1687 aa26.73■■□□□ 1.87
TPM4-208ENST00000588410 SBF2Q86WG5 1849 aa26.72■■□□□ 1.87
TPM4-208ENST00000588410 PRIM1P49642 420 aaKnown RBP26.71■■□□□ 1.87
TPM4-208ENST00000588410 PCDH11XQ9BZA7 1347 aa26.7■■□□□ 1.87
TPM4-208ENST00000588410 PCDH11YQ9BZA8 1340 aa26.7■■□□□ 1.87
TPM4-208ENST00000588410 EYA1Q99502 592 aa26.7■■□□□ 1.86
TPM4-208ENST00000588410 STK32BQ9NY57 414 aa26.7■■□□□ 1.86
TPM4-208ENST00000588410 NUP188Q5SRE5 1749 aa26.7■■□□□ 1.86
TPM4-208ENST00000588410 EIF4A2Q14240 407 aaKnown RBP26.69■■□□□ 1.86
TPM4-208ENST00000588410 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
TPM4-208ENST00000588410 NHSQ6T4R5 1651 aa26.69■■□□□ 1.86
TPM4-208ENST00000588410 RGPD3A6NKT7 1758 aaPredicted RBP26.68■■□□□ 1.86
TPM4-208ENST00000588410 RGPD4Q7Z3J3 1758 aa26.68■■□□□ 1.86
TPM4-208ENST00000588410 SRCAPQ6ZRS2 3230 aa26.67■■□□□ 1.86
TPM4-208ENST00000588410 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
TPM4-208ENST00000588410 SPG7Q9UQ90 795 aa26.66■■□□□ 1.86
TPM4-208ENST00000588410 RGPD2P0DJD1 1756 aa26.66■■□□□ 1.86
TPM4-208ENST00000588410 SLC15A2Q16348 729 aa26.63■■□□□ 1.85
TPM4-208ENST00000588410 LRP5O75197 1615 aa26.63■■□□□ 1.85
TPM4-208ENST00000588410 NCAPD2Q15021 1401 aa26.63■■□□□ 1.85
TPM4-208ENST00000588410 ANKRD26Q9UPS8 1709 aa26.62■■□□□ 1.85
TPM4-208ENST00000588410 CYP27B1O15528 508 aa26.61■■□□□ 1.85
TPM4-208ENST00000588410 SLC27A3Q5K4L6 730 aa26.61■■□□□ 1.85
TPM4-208ENST00000588410 SPON1Q9HCB6 807 aa26.61■■□□□ 1.85
TPM4-208ENST00000588410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.6■■□□□ 1.852e-9■■□□□ 11.7
TPM4-208ENST00000588410 PER1O15534 1290 aaPredicted RBP26.59■■□□□ 1.85
TPM4-208ENST00000588410 CC2D1BQ5T0F9 858 aaKnown RBP26.59■■□□□ 1.85
TPM4-208ENST00000588410 IGSF1Q8N6C5 1336 aa26.58■■□□□ 1.85
TPM4-208ENST00000588410 LRRC4BQ9NT99 713 aa26.57■■□□□ 1.84
TPM4-208ENST00000588410 MAP2P11137 1827 aaKnown RBP26.57■■□□□ 1.84
TPM4-208ENST00000588410 MPRIPQ6WCQ1 1025 aa26.55■■□□□ 1.84
TPM4-208ENST00000588410 PPP1R1BQ9UD71 204 aaPredicted RBP26.55■■□□□ 1.84
TPM4-208ENST00000588410 BTAF1O14981 1849 aa26.55■■□□□ 1.84
TPM4-208ENST00000588410 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
TPM4-208ENST00000588410 IFNL2Q8IZJ0 200 aa26.54■■□□□ 1.84
TPM4-208ENST00000588410 SHANK3Q9BYB0 1731 aa26.53■■□□□ 1.84
TPM4-208ENST00000588410 NKX1-1Q15270 411 aaPredicted RBP26.53■■□□□ 1.84
TPM4-208ENST00000588410 CCNL1Q9UK58 526 aaPredicted RBP26.53■■□□□ 1.84
TPM4-208ENST00000588410 ZBTB7AO95365 584 aa26.52■■□□□ 1.84
TPM4-208ENST00000588410 MTHFSP49914 203 aa26.52■■□□□ 1.84
TPM4-208ENST00000588410 DOT1LQ8TEK3 1739 aa26.52■■□□□ 1.84
TPM4-208ENST00000588410 PDGFDQ9GZP0 370 aaPredicted RBP26.52■■□□□ 1.84
TPM4-208ENST00000588410 PLEKHG2Q9H7P9 1386 aa26.51■■□□□ 1.83
TPM4-208ENST00000588410 PHKG2P15735 406 aa26.51■■□□□ 1.83
TPM4-208ENST00000588410 KCNQ4P56696 695 aa26.51■■□□□ 1.83
TPM4-208ENST00000588410 ZNF827Q17R98 1081 aa26.51■■□□□ 1.83
TPM4-208ENST00000588410 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
TPM4-208ENST00000588410 IL13P35225 146 aa26.5■■□□□ 1.83
TPM4-208ENST00000588410 AMOTQ4VCS5 1084 aa26.49■■□□□ 1.83
TPM4-208ENST00000588410 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
TPM4-208ENST00000588410 NPC1L1Q9UHC9 1359 aa26.48■■□□□ 1.83
TPM4-208ENST00000588410 SULT6B1Q6IMI4 303 aa26.48■■□□□ 1.83
TPM4-208ENST00000588410 AKT1S1Q96B36 256 aa26.48■■□□□ 1.83
TPM4-208ENST00000588410 TFCP2L1Q9NZI6 479 aa26.48■■□□□ 1.83
TPM4-208ENST00000588410 ATF5Q9Y2D1 282 aaPredicted RBP26.48■■□□□ 1.83
TPM4-208ENST00000588410 HMGB2P26583 209 aaKnown RBP26.47■■□□□ 1.83
TPM4-208ENST00000588410 AEBP1Q8IUX7 1158 aa26.47■■□□□ 1.83
TPM4-208ENST00000588410 TMOD3Q9NYL9 352 aa26.47■■□□□ 1.83
TPM4-208ENST00000588410 KAT6BQ8WYB5 2073 aa26.46■■□□□ 1.83
TPM4-208ENST00000588410 PALLDQ8WX93 1383 aa26.46■■□□□ 1.83
TPM4-208ENST00000588410 PKD1L3Q7Z443 1732 aa26.46■■□□□ 1.83
TPM4-208ENST00000588410 HSP90AB1P08238 724 aaKnown RBP26.46■■□□□ 1.83
TPM4-208ENST00000588410 PIGBQ92521 554 aa26.46■■□□□ 1.83
TPM4-208ENST00000588410 MTFR1LQ9H019 292 aa26.46■■□□□ 1.83
TPM4-208ENST00000588410 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
TPM4-208ENST00000588410 PAPPAQ13219 1627 aa26.43■■□□□ 1.82
TPM4-208ENST00000588410 DIAPH1O60610 1272 aaKnown RBP26.43■■□□□ 1.82
TPM4-208ENST00000588410 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
TPM4-208ENST00000588410 DCAF5Q96JK2 942 aa26.41■■□□□ 1.82
TPM4-208ENST00000588410 CASZ1Q86V15 1759 aa26.4■■□□□ 1.82
TPM4-208ENST00000588410 KDRP35968 1356 aa26.39■■□□□ 1.82
TPM4-208ENST00000588410 ERVV-2B6SEH9 535 aa26.39■■□□□ 1.82
TPM4-208ENST00000588410 PTGER2P43116 358 aa26.39■■□□□ 1.82
TPM4-208ENST00000588410 PNPLA7Q6ZV29 1317 aa26.39■■□□□ 1.81
TPM4-208ENST00000588410 SLC16A10Q8TF71 515 aa26.38■■□□□ 1.81
TPM4-208ENST00000588410 MSH5O43196 834 aa26.37■■□□□ 1.81
TPM4-208ENST00000588410 HMOX1P09601 288 aa26.37■■□□□ 1.81
TPM4-208ENST00000588410 CABP4P57796 275 aa26.36■■□□□ 1.81
TPM4-208ENST00000588410 ASAP1Q9ULH1 1129 aa26.36■■□□□ 1.81
TPM4-208ENST00000588410 TOGARAM1Q9Y4F4 1720 aa26.34■■□□□ 1.81
TPM4-208ENST00000588410 LOC102724428A0A0B4J2F2 783 aa26.34■■□□□ 1.81
TPM4-208ENST00000588410 SIK1P57059 783 aa26.34■■□□□ 1.81
TPM4-208ENST00000588410 CFAP53Q96M91 514 aa26.34■■□□□ 1.81
TPM4-208ENST00000588410 LY75O60449 1722 aa26.34■■□□□ 1.81
TPM4-208ENST00000588410 U2SURPO15042 1029 aaKnown RBP26.33■■□□□ 1.81
TPM4-208ENST00000588410 AK7Q96M32 723 aa26.33■■□□□ 1.81
TPM4-208ENST00000588410 ATG3Q9NT62 314 aa26.33■■□□□ 1.81
TPM4-208ENST00000588410 DCAF8L1A6NGE4 600 aa26.32■■□□□ 1.8
TPM4-208ENST00000588410 POLD1P28340 1107 aa26.32■■□□□ 1.8
TPM4-208ENST00000588410 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
TPM4-208ENST00000588410 FLAD1Q8NFF5 587 aa26.31■■□□□ 1.8
TPM4-208ENST00000588410 ARXQ96QS3 562 aa26.31■■□□□ 1.8
TPM4-208ENST00000588410 SGIP1Q9BQI5 828 aa26.31■■□□□ 1.8
TPM4-208ENST00000588410 ATP6V1AP38606 617 aa26.3■■□□□ 1.8
TPM4-208ENST00000588410 COL23A1Q86Y22 540 aaPredicted RBP26.3■■□□□ 1.8
TPM4-208ENST00000588410 KDM6AO15550 1401 aaPredicted RBP26.3■■□□□ 1.8
TPM4-208ENST00000588410 RBM42Q9BTD8 480 aaKnown RBP26.28■■□□□ 1.8
TPM4-208ENST00000588410 FHDC1Q9C0D6 1143 aaPredicted RBP26.27■■□□□ 1.8
TPM4-208ENST00000588410 PPP2R1AP30153 589 aa26.26■■□□□ 1.79
TPM4-208ENST00000588410 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms