RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 OVOS2A0A0G2JMS6 1433 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 RGS12O14924 1447 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
CIRBP-218ENST00000588344 HMOX1P09601 288 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 PCDH11XQ9BZA7 1347 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
CIRBP-218ENST00000588344 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
CIRBP-218ENST00000588344 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
CIRBP-218ENST00000588344 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
CIRBP-218ENST00000588344 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
CIRBP-218ENST00000588344 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
CIRBP-218ENST00000588344 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
CIRBP-218ENST00000588344 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
CIRBP-218ENST00000588344 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
CIRBP-218ENST00000588344 BCL9O00512 1426 aa12.03□□□□□ -0.48
CIRBP-218ENST00000588344 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
CIRBP-218ENST00000588344 PRKAR2BP31323 418 aa12.02□□□□□ -0.49
CIRBP-218ENST00000588344 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
CIRBP-218ENST00000588344 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
CIRBP-218ENST00000588344 PNISRQ8TF01 805 aaKnown RBP12.02□□□□□ -0.49
CIRBP-218ENST00000588344 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.49
CIRBP-218ENST00000588344 RGPD5Q99666 1765 aa12.02□□□□□ -0.49
CIRBP-218ENST00000588344 MEGF6O75095 1541 aa12.01□□□□□ -0.49
CIRBP-218ENST00000588344 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
CIRBP-218ENST00000588344 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
CIRBP-218ENST00000588344 THSD7AQ9UPZ6 1657 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 CYP27B1O15528 508 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
CIRBP-218ENST00000588344 PHKG2P15735 406 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
CIRBP-218ENST00000588344 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
CIRBP-218ENST00000588344 RUNDC1Q96C34 613 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 PLEKHF1Q96S99 279 aa12□□□□□ -0.49
CIRBP-218ENST00000588344 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
CIRBP-218ENST00000588344 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
CIRBP-218ENST00000588344 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
CIRBP-218ENST00000588344 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
CIRBP-218ENST00000588344 CCDC184Q52MB2 194 aa11.98□□□□□ -0.49
CIRBP-218ENST00000588344 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
CIRBP-218ENST00000588344 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
CIRBP-218ENST00000588344 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
CIRBP-218ENST00000588344 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
CIRBP-218ENST00000588344 LMOD3Q0VAK6 560 aa11.97□□□□□ -0.49
CIRBP-218ENST00000588344 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
CIRBP-218ENST00000588344 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
CIRBP-218ENST00000588344 MIER1Q8N108 512 aa11.97□□□□□ -0.49
CIRBP-218ENST00000588344 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
CIRBP-218ENST00000588344 NFE2L2Q16236 605 aa11.96□□□□□ -0.49
CIRBP-218ENST00000588344 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
CIRBP-218ENST00000588344 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
CIRBP-218ENST00000588344 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 PLSCR1O15162 318 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 TRIM37O94972 964 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 TMPOP42166 694 aaKnown RBP11.94□□□□□ -0.5
CIRBP-218ENST00000588344 CABP4P57796 275 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
CIRBP-218ENST00000588344 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
CIRBP-218ENST00000588344 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 SOCS7O14512 581 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 RNMTO43148 476 aaKnown RBP11.93□□□□□ -0.5
CIRBP-218ENST00000588344 RIPK4P57078 832 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-218ENST00000588344 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-218ENST00000588344 ACSBG1Q96GR2 724 aa11.93□□□□□ -0.5
CIRBP-218ENST00000588344 KCNQ2O43526 872 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 APBA3O96018 575 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 BAG6P46379 1132 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 TEFQ10587 303 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 IL17REQ8NFR9 667 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
CIRBP-218ENST00000588344 APAF1O14727 1248 aa11.91□□□□□ -0.5
CIRBP-218ENST00000588344 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
CIRBP-218ENST00000588344 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
CIRBP-218ENST00000588344 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
CIRBP-218ENST00000588344 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
CIRBP-218ENST00000588344 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
CIRBP-218ENST00000588344 PIGBQ92521 554 aa11.9□□□□□ -0.5
CIRBP-218ENST00000588344 BABAM1Q9NWV8 329 aa11.9□□□□□ -0.5
CIRBP-218ENST00000588344 CEMIPQ8WUJ3 1361 aa11.9□□□□□ -0.5
CIRBP-218ENST00000588344 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
CIRBP-218ENST00000588344 WNK3Q9BYP7 1800 aa11.89□□□□□ -0.51
CIRBP-218ENST00000588344 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
CIRBP-218ENST00000588344 EP400Q96L91 3159 aa11.89□□□□□ -0.51
CIRBP-218ENST00000588344 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
CIRBP-218ENST00000588344 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
CIRBP-218ENST00000588344 MCM10Q7L590 875 aa11.88□□□□□ -0.51
CIRBP-218ENST00000588344 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
CIRBP-218ENST00000588344 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
CIRBP-218ENST00000588344 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
CIRBP-218ENST00000588344 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
CIRBP-218ENST00000588344 TTC5Q8N0Z6 440 aa11.86□□□□□ -0.51
CIRBP-218ENST00000588344 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
CIRBP-218ENST00000588344 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
CIRBP-218ENST00000588344 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms