RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-221ENST00000588066 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
NEDD4L-221ENST00000588066 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-221ENST00000588066 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-221ENST00000588066 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
NEDD4L-221ENST00000588066 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
NEDD4L-221ENST00000588066 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
NEDD4L-221ENST00000588066 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-221ENST00000588066 LTN1O94822 1766 aa11.25□□□□□ -0.61
NEDD4L-221ENST00000588066 STRCQ7RTU9 1775 aa11.25□□□□□ -0.61
NEDD4L-221ENST00000588066 ZBTB7CA1YPR0 619 aa11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 LTV1Q96GA3 475 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
NEDD4L-221ENST00000588066 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
NEDD4L-221ENST00000588066 CHL1O00533 1208 aa11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 TWISTNBQ3B726 338 aaPredicted RBP11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
NEDD4L-221ENST00000588066 ALS2Q96Q42 1657 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 ABCC6O95255 1503 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 VAMP4O75379 141 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 PANK1Q8TE04 598 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 API5Q9BZZ5 524 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 COG6Q9Y2V7 657 aa11.21□□□□□ -0.61
NEDD4L-221ENST00000588066 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
NEDD4L-221ENST00000588066 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
NEDD4L-221ENST00000588066 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
NEDD4L-221ENST00000588066 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
NEDD4L-221ENST00000588066 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
NEDD4L-221ENST00000588066 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 MCM10Q7L590 875 aa11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 RWDD1Q9H446 243 aaPredicted RBP11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
NEDD4L-221ENST00000588066 CRB1P82279 1406 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 C1orf141Q5JVX7 400 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 FBXO41Q8TF61 875 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 XIRP1Q702N8 1843 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 PXDNQ92626 1479 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
NEDD4L-221ENST00000588066 KDM2BQ8NHM5 1336 aa11.17□□□□□ -0.62
NEDD4L-221ENST00000588066 MED1Q15648 1581 aaPredicted RBP11.17□□□□□ -0.62
NEDD4L-221ENST00000588066 TRIM27P14373 513 aa11.17□□□□□ -0.62
NEDD4L-221ENST00000588066 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
NEDD4L-221ENST00000588066 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
NEDD4L-221ENST00000588066 CPDO75976 1380 aa11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 ZC3H6P61129 1189 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
NEDD4L-221ENST00000588066 ERBB3P21860 1342 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 ELL2O00472 640 aaPredicted RBP11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 TSPYL6Q8N831 410 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.623e-7■□□□□ 9.9
NEDD4L-221ENST00000588066 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 OVOS2A0A0G2JMS6 1433 aa11.15□□□□□ -0.62
NEDD4L-221ENST00000588066 PTPRCP08575 1304 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 CAPN15O75808 1086 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 RLBP1P12271 317 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 TEFQ10587 303 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 CCDC30Q5VVM6 783 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
NEDD4L-221ENST00000588066 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms