RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 MEGF6O75095 1541 aa6.92□□□□□ -1.3
LINC01140-208ENST00000587165 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
LINC01140-208ENST00000587165 TXNRD1Q16881 649 aa6.92□□□□□ -1.3
LINC01140-208ENST00000587165 SLC27A3Q5K4L6 730 aa6.92□□□□□ -1.3
LINC01140-208ENST00000587165 EYA1Q99502 592 aa6.92□□□□□ -1.3
LINC01140-208ENST00000587165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC01140-208ENST00000587165 PEAK1Q9H792 1746 aa6.92□□□□□ -1.3
LINC01140-208ENST00000587165 KCNQ2O43526 872 aa6.91□□□□□ -1.3
LINC01140-208ENST00000587165 HSP90AB1P08238 724 aaKnown RBP6.91□□□□□ -1.3
LINC01140-208ENST00000587165 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
LINC01140-208ENST00000587165 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
LINC01140-208ENST00000587165 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
LINC01140-208ENST00000587165 AMER1Q5JTC6 1135 aaPredicted RBP6.91□□□□□ -1.3
LINC01140-208ENST00000587165 CC2D1BQ5T0F9 858 aaKnown RBP6.91□□□□□ -1.3
LINC01140-208ENST00000587165 CFAP53Q96M91 514 aa6.91□□□□□ -1.3
LINC01140-208ENST00000587165 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
LINC01140-208ENST00000587165 KAT6BQ8WYB5 2073 aa6.91□□□□□ -1.3
LINC01140-208ENST00000587165 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.3
LINC01140-208ENST00000587165 PTF1AQ7RTS3 328 aa6.9□□□□□ -1.3
LINC01140-208ENST00000587165 IFNL2Q8IZJ0 200 aa6.9□□□□□ -1.3
LINC01140-208ENST00000587165 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.3
LINC01140-208ENST00000587165 SPON1Q9HCB6 807 aa6.9□□□□□ -1.3
LINC01140-208ENST00000587165 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.3
LINC01140-208ENST00000587165 IGSF1Q8N6C5 1336 aa6.9□□□□□ -1.3
LINC01140-208ENST00000587165 RGPD3A6NKT7 1758 aaPredicted RBP6.9□□□□□ -1.31
LINC01140-208ENST00000587165 RGPD4Q7Z3J3 1758 aa6.9□□□□□ -1.31
LINC01140-208ENST00000587165 MTHFSP49914 203 aa6.89□□□□□ -1.31
LINC01140-208ENST00000587165 CNGB1Q14028 1251 aaPredicted RBP6.89□□□□□ -1.31
LINC01140-208ENST00000587165 ZNF530Q6P9A1 599 aaPredicted RBP6.89□□□□□ -1.31
LINC01140-208ENST00000587165 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
LINC01140-208ENST00000587165 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
LINC01140-208ENST00000587165 NCAPD2Q15021 1401 aa6.89□□□□□ -1.31
LINC01140-208ENST00000587165 NHSQ6T4R5 1651 aa6.89□□□□□ -1.31
LINC01140-208ENST00000587165 ANKRD26Q9UPS8 1709 aa6.89□□□□□ -1.31
LINC01140-208ENST00000587165 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 CYP27B1O15528 508 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 DIAPH1O60610 1272 aaKnown RBP6.88□□□□□ -1.31
LINC01140-208ENST00000587165 ZEB1P37275 1124 aaPredicted RBP6.88□□□□□ -1.31
LINC01140-208ENST00000587165 SLC15A2Q16348 729 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 SULT6B1Q6IMI4 303 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 MPRIPQ6WCQ1 1025 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 ANO8Q9HCE9 1232 aaPredicted RBP6.88□□□□□ -1.31
LINC01140-208ENST00000587165 NUDCQ9Y266 331 aa6.88□□□□□ -1.31
LINC01140-208ENST00000587165 RREB1Q92766 1687 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
LINC01140-208ENST00000587165 PHKG2P15735 406 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 IL13P35225 146 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
LINC01140-208ENST00000587165 PROM2Q8N271 834 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 TFCP2L1Q9NZI6 479 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
LINC01140-208ENST00000587165 MAP2P11137 1827 aaKnown RBP6.86□□□□□ -1.31
LINC01140-208ENST00000587165 SBF2Q86WG5 1849 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 ERVV-2B6SEH9 535 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 U2SURPO15042 1029 aaKnown RBP6.86□□□□□ -1.31
LINC01140-208ENST00000587165 NEFMP07197 916 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 CABP4P57796 275 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 FLAD1Q8NFF5 587 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 AK7Q96M32 723 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 MTFR1LQ9H019 292 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 LRP5O75197 1615 aa6.86□□□□□ -1.31
LINC01140-208ENST00000587165 KDRP35968 1356 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 MSH5O43196 834 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 ZBTB7AO95365 584 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 POLD1P28340 1107 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 SLC16A10Q8TF71 515 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 PIGBQ92521 554 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 BTAF1O14981 1849 aa6.85□□□□□ -1.31
LINC01140-208ENST00000587165 DOT1LQ8TEK3 1739 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 SRCAPQ6ZRS2 3230 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 HMOX1P09601 288 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 SIK1P57059 783 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 ZNF827Q17R98 1081 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 AKAP4Q5JQC9 854 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 RGPD2P0DJD1 1756 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 PKD1L3Q7Z443 1732 aa6.84□□□□□ -1.31
LINC01140-208ENST00000587165 U2AF1L5P0DN76 240 aaPredicted RBP6.83□□□□□ -1.32
LINC01140-208ENST00000587165 ATP6V1AP38606 617 aa6.83□□□□□ -1.32
LINC01140-208ENST00000587165 U2AF1Q01081 240 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC01140-208ENST00000587165 ATF5Q9Y2D1 282 aaPredicted RBP6.83□□□□□ -1.32
LINC01140-208ENST00000587165 PPP2R1AP30153 589 aa6.82□□□□□ -1.32
LINC01140-208ENST00000587165 KCNQ4P56696 695 aa6.82□□□□□ -1.32
LINC01140-208ENST00000587165 RALBP1Q15311 655 aa6.82□□□□□ -1.32
LINC01140-208ENST00000587165 RBM42Q9BTD8 480 aaKnown RBP6.82□□□□□ -1.32
LINC01140-208ENST00000587165 SHANK3Q9BYB0 1731 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 PNPLA7Q6ZV29 1317 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 GNPATO15228 680 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 PHF14O94880 888 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 SSFA2P28290 1259 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 PRKAR2BP31323 418 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 TEFQ10587 303 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 TTC5Q8N0Z6 440 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 KLHL34Q8N239 644 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms