RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
SMARCA4-212ENST00000586985 KCNQ2O43526 872 aa19.55■□□□□ 0.72
SMARCA4-212ENST00000586985 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
SMARCA4-212ENST00000586985 EZH2Q15910 746 aaKnown RBP19.55■□□□□ 0.72
SMARCA4-212ENST00000586985 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
SMARCA4-212ENST00000586985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMARCA4-212ENST00000586985 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
SMARCA4-212ENST00000586985 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
SMARCA4-212ENST00000586985 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
SMARCA4-212ENST00000586985 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
SMARCA4-212ENST00000586985 PTF1AQ7RTS3 328 aa19.53■□□□□ 0.72
SMARCA4-212ENST00000586985 SYTL4Q96C24 671 aaPredicted RBP19.53■□□□□ 0.72
SMARCA4-212ENST00000586985 WNK3Q9BYP7 1800 aa19.53■□□□□ 0.72
SMARCA4-212ENST00000586985 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-212ENST00000586985 PLSCR1O15162 318 aa19.52■□□□□ 0.72
SMARCA4-212ENST00000586985 RGPD2P0DJD1 1756 aa19.52■□□□□ 0.71
SMARCA4-212ENST00000586985 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
SMARCA4-212ENST00000586985 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-212ENST00000586985 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-212ENST00000586985 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
SMARCA4-212ENST00000586985 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
SMARCA4-212ENST00000586985 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 CYP27B1O15528 508 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 RALBP1Q15311 655 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 IFNL2Q8IZJ0 200 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
SMARCA4-212ENST00000586985 HMOX1P09601 288 aa19.49■□□□□ 0.71
SMARCA4-212ENST00000586985 PHKG2P15735 406 aa19.47■□□□□ 0.71
SMARCA4-212ENST00000586985 NKX1-1Q15270 411 aaPredicted RBP19.47■□□□□ 0.71
SMARCA4-212ENST00000586985 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
SMARCA4-212ENST00000586985 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
SMARCA4-212ENST00000586985 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
SMARCA4-212ENST00000586985 ZNF530Q6P9A1 599 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-212ENST00000586985 KDRP35968 1356 aa19.44■□□□□ 0.7
SMARCA4-212ENST00000586985 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
SMARCA4-212ENST00000586985 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
SMARCA4-212ENST00000586985 MPRIPQ6WCQ1 1025 aa19.44■□□□□ 0.7
SMARCA4-212ENST00000586985 U2AF1L5P0DN76 240 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-212ENST00000586985 U2AF1Q01081 240 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMARCA4-212ENST00000586985 PROM2Q8N271 834 aa19.42■□□□□ 0.7
SMARCA4-212ENST00000586985 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
SMARCA4-212ENST00000586985 TNS1Q9HBL0 1735 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-212ENST00000586985 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-212ENST00000586985 R3HDM1Q15032 1099 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-212ENST00000586985 TMOD3Q9NYL9 352 aa19.39■□□□□ 0.69
SMARCA4-212ENST00000586985 COL3A1P02461 1466 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-212ENST00000586985 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
SMARCA4-212ENST00000586985 MTHFSDQ2M296 383 aaKnown RBP19.38■□□□□ 0.69
SMARCA4-212ENST00000586985 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
SMARCA4-212ENST00000586985 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 FCHSD2O94868 740 aa19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 CABP4P57796 275 aa19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 PIGBQ92521 554 aa19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 SMARCC1Q92922 1105 aaPredicted RBP19.37■□□□□ 0.69
SMARCA4-212ENST00000586985 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
SMARCA4-212ENST00000586985 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
SMARCA4-212ENST00000586985 SLC27A3Q5K4L6 730 aa19.36■□□□□ 0.69
SMARCA4-212ENST00000586985 PRKRIP1Q9H875 184 aaPredicted RBP19.36■□□□□ 0.69
SMARCA4-212ENST00000586985 GAS2L2Q8NHY3 880 aa19.35■□□□□ 0.69
SMARCA4-212ENST00000586985 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
SMARCA4-212ENST00000586985 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
SMARCA4-212ENST00000586985 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
SMARCA4-212ENST00000586985 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SMARCA4-212ENST00000586985 NEFMP07197 916 aa19.34■□□□□ 0.69
SMARCA4-212ENST00000586985 HMGB2P26583 209 aaKnown RBP19.34■□□□□ 0.69
SMARCA4-212ENST00000586985 EP400Q96L91 3159 aa19.34■□□□□ 0.69
SMARCA4-212ENST00000586985 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
SMARCA4-212ENST00000586985 CCNL1Q9UK58 526 aaPredicted RBP19.33■□□□□ 0.68
SMARCA4-212ENST00000586985 PHACTR3Q96KR7 559 aa19.32■□□□□ 0.68
SMARCA4-212ENST00000586985 LRRC4BQ9NT99 713 aa19.32■□□□□ 0.68
SMARCA4-212ENST00000586985 KCNQ4P56696 695 aa19.31■□□□□ 0.68
SMARCA4-212ENST00000586985 SLC15A2Q16348 729 aa19.31■□□□□ 0.68
SMARCA4-212ENST00000586985 NFATC2IPQ8NCF5 419 aa19.31■□□□□ 0.68
SMARCA4-212ENST00000586985 LGR6Q9HBX8 967 aa19.31■□□□□ 0.68
SMARCA4-212ENST00000586985 GNAT3A8MTJ3 354 aa19.3■□□□□ 0.68
SMARCA4-212ENST00000586985 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
SMARCA4-212ENST00000586985 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
SMARCA4-212ENST00000586985 PALLDQ8WX93 1383 aa19.3■□□□□ 0.68
SMARCA4-212ENST00000586985 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
SMARCA4-212ENST00000586985 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
SMARCA4-212ENST00000586985 ATG3Q9NT62 314 aa19.29■□□□□ 0.68
SMARCA4-212ENST00000586985 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
SMARCA4-212ENST00000586985 BTAF1O14981 1849 aa19.28■□□□□ 0.68
SMARCA4-212ENST00000586985 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
SMARCA4-212ENST00000586985 ANP32CO43423 234 aa19.27■□□□□ 0.68
SMARCA4-212ENST00000586985 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
SMARCA4-212ENST00000586985 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
SMARCA4-212ENST00000586985 SIK1P57059 783 aa19.26■□□□□ 0.67
SMARCA4-212ENST00000586985 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-212ENST00000586985 RGPD3A6NKT7 1758 aaPredicted RBP19.26■□□□□ 0.67
SMARCA4-212ENST00000586985 RGPD4Q7Z3J3 1758 aa19.26■□□□□ 0.67
SMARCA4-212ENST00000586985 RREB1Q92766 1687 aa19.25■□□□□ 0.67
SMARCA4-212ENST00000586985 ATP6V1AP38606 617 aa19.25■□□□□ 0.67
SMARCA4-212ENST00000586985 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMARCA4-212ENST00000586985 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-212ENST00000586985 TFCP2L1Q9NZI6 479 aa19.25■□□□□ 0.67
SMARCA4-212ENST00000586985 MAP3K5Q99683 1374 aa19.24■□□□□ 0.67
SMARCA4-212ENST00000586985 TEFQ10587 303 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms