RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.34
RFX1-202ENST00000586913 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
RFX1-202ENST00000586913 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
RFX1-202ENST00000586913 KCNQ2O43526 872 aa23.43■■□□□ 1.34
RFX1-202ENST00000586913 NPC1L1Q9UHC9 1359 aa23.42■■□□□ 1.34
RFX1-202ENST00000586913 EYA1Q99502 592 aa23.42■■□□□ 1.34
RFX1-202ENST00000586913 EIF4A2Q14240 407 aaKnown RBP23.41■■□□□ 1.34
RFX1-202ENST00000586913 ACSBG1Q96GR2 724 aa23.41■■□□□ 1.34
RFX1-202ENST00000586913 NBPF14Q5TI25 921 aa23.4■■□□□ 1.34
RFX1-202ENST00000586913 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
RFX1-202ENST00000586913 NUP188Q5SRE5 1749 aa23.39■■□□□ 1.34
RFX1-202ENST00000586913 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.34
RFX1-202ENST00000586913 PCDH11XQ9BZA7 1347 aa23.38■■□□□ 1.33
RFX1-202ENST00000586913 PCDH11YQ9BZA8 1340 aa23.38■■□□□ 1.33
RFX1-202ENST00000586913 PROM2Q8N271 834 aa23.38■■□□□ 1.33
RFX1-202ENST00000586913 PSDA5PKW4 1024 aaPredicted RBP23.37■■□□□ 1.33
RFX1-202ENST00000586913 R3HDM1Q15032 1099 aaKnown RBP23.37■■□□□ 1.33
RFX1-202ENST00000586913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.37■■□□□ 1.33
RFX1-202ENST00000586913 TXNRD1Q16881 649 aa23.36■■□□□ 1.33
RFX1-202ENST00000586913 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
RFX1-202ENST00000586913 SPG7Q9UQ90 795 aa23.34■■□□□ 1.33
RFX1-202ENST00000586913 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
RFX1-202ENST00000586913 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
RFX1-202ENST00000586913 BTAF1O14981 1849 aa23.32■■□□□ 1.32
RFX1-202ENST00000586913 CYP27B1O15528 508 aa23.32■■□□□ 1.32
RFX1-202ENST00000586913 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
RFX1-202ENST00000586913 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
RFX1-202ENST00000586913 MTHFSP49914 203 aa23.3■■□□□ 1.32
RFX1-202ENST00000586913 NKX1-1Q15270 411 aaPredicted RBP23.3■■□□□ 1.32
RFX1-202ENST00000586913 IL13P35225 146 aa23.29■■□□□ 1.32
RFX1-202ENST00000586913 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
RFX1-202ENST00000586913 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
RFX1-202ENST00000586913 LRP5O75197 1615 aa23.27■■□□□ 1.32
RFX1-202ENST00000586913 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
RFX1-202ENST00000586913 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
RFX1-202ENST00000586913 KDRP35968 1356 aa23.26■■□□□ 1.31
RFX1-202ENST00000586913 IFNL2Q8IZJ0 200 aa23.25■■□□□ 1.31
RFX1-202ENST00000586913 PHKG2P15735 406 aa23.24■■□□□ 1.31
RFX1-202ENST00000586913 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
RFX1-202ENST00000586913 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
RFX1-202ENST00000586913 SLC15A2Q16348 729 aa23.23■■□□□ 1.31
RFX1-202ENST00000586913 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
RFX1-202ENST00000586913 LRRC4BQ9NT99 713 aa23.22■■□□□ 1.31
RFX1-202ENST00000586913 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
RFX1-202ENST00000586913 SULT6B1Q6IMI4 303 aa23.21■■□□□ 1.31
RFX1-202ENST00000586913 AEBP1Q8IUX7 1158 aa23.21■■□□□ 1.31
RFX1-202ENST00000586913 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
RFX1-202ENST00000586913 HMGB2P26583 209 aaKnown RBP23.2■■□□□ 1.3
RFX1-202ENST00000586913 HSP90AB1P08238 724 aaKnown RBP23.19■■□□□ 1.3
RFX1-202ENST00000586913 LY75O60449 1722 aa23.19■■□□□ 1.3
RFX1-202ENST00000586913 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
RFX1-202ENST00000586913 TOGARAM1Q9Y4F4 1720 aa23.18■■□□□ 1.3
RFX1-202ENST00000586913 SMARCC1Q92922 1105 aaPredicted RBP23.17■■□□□ 1.3
RFX1-202ENST00000586913 PIGBQ92521 554 aa23.16■■□□□ 1.3
RFX1-202ENST00000586913 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
RFX1-202ENST00000586913 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
RFX1-202ENST00000586913 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
RFX1-202ENST00000586913 SRCAPQ6ZRS2 3230 aa23.15■■□□□ 1.3
RFX1-202ENST00000586913 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
RFX1-202ENST00000586913 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
RFX1-202ENST00000586913 SPON1Q9HCB6 807 aa23.15■■□□□ 1.3
RFX1-202ENST00000586913 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
RFX1-202ENST00000586913 ITGB4P16144 1822 aa23.15■■□□□ 1.3
RFX1-202ENST00000586913 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
RFX1-202ENST00000586913 CASZ1Q86V15 1759 aa23.14■■□□□ 1.3
RFX1-202ENST00000586913 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
RFX1-202ENST00000586913 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
RFX1-202ENST00000586913 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
RFX1-202ENST00000586913 ZNF827Q17R98 1081 aa23.12■■□□□ 1.29
RFX1-202ENST00000586913 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
RFX1-202ENST00000586913 CFAP53Q96M91 514 aa23.12■■□□□ 1.29
RFX1-202ENST00000586913 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
RFX1-202ENST00000586913 HMOX1P09601 288 aa23.1■■□□□ 1.29
RFX1-202ENST00000586913 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
RFX1-202ENST00000586913 KCNQ4P56696 695 aa23.09■■□□□ 1.29
RFX1-202ENST00000586913 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
RFX1-202ENST00000586913 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
RFX1-202ENST00000586913 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
RFX1-202ENST00000586913 QSER1Q2KHR3 1735 aa23.07■■□□□ 1.28
RFX1-202ENST00000586913 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
RFX1-202ENST00000586913 SLC16A10Q8TF71 515 aa23.06■■□□□ 1.28
RFX1-202ENST00000586913 TFCP2L1Q9NZI6 479 aa23.06■■□□□ 1.28
RFX1-202ENST00000586913 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
RFX1-202ENST00000586913 LOC102724428A0A0B4J2F2 783 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 SIK1P57059 783 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 CABP4P57796 275 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 ATG3Q9NT62 314 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 NUDCQ9Y266 331 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 PNPLA7Q6ZV29 1317 aa23.05■■□□□ 1.28
RFX1-202ENST00000586913 PTGER2P43116 358 aa23.03■■□□□ 1.28
RFX1-202ENST00000586913 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
RFX1-202ENST00000586913 C5P01031 1676 aa23.03■■□□□ 1.28
RFX1-202ENST00000586913 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
RFX1-202ENST00000586913 FLAD1Q8NFF5 587 aa23■■□□□ 1.27
RFX1-202ENST00000586913 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
RFX1-202ENST00000586913 PPP1R1BQ9UD71 204 aaPredicted RBP23■■□□□ 1.27
RFX1-202ENST00000586913 ATF5Q9Y2D1 282 aaPredicted RBP23■■□□□ 1.27
RFX1-202ENST00000586913 DDX10Q13206 875 aaKnown RBP22.99■■□□□ 1.27
RFX1-202ENST00000586913 RALBP1Q15311 655 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms