RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
TPM4-205ENST00000586833 NCAPD2Q15021 1401 aa18.92■□□□□ 0.62
TPM4-205ENST00000586833 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
TPM4-205ENST00000586833 PLEKHO1Q53GL0 409 aaPredicted RBP18.92■□□□□ 0.62
TPM4-205ENST00000586833 BCL11BQ9C0K0 894 aaPredicted RBP18.92■□□□□ 0.62
TPM4-205ENST00000586833 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
TPM4-205ENST00000586833 MEGF6O75095 1541 aa18.91■□□□□ 0.62
TPM4-205ENST00000586833 APBA3O96018 575 aa18.91■□□□□ 0.62
TPM4-205ENST00000586833 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
TPM4-205ENST00000586833 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
TPM4-205ENST00000586833 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.61
TPM4-205ENST00000586833 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
TPM4-205ENST00000586833 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
TPM4-205ENST00000586833 IFNL2Q8IZJ0 200 aa18.87■□□□□ 0.61
TPM4-205ENST00000586833 WNK3Q9BYP7 1800 aa18.87■□□□□ 0.61
TPM4-205ENST00000586833 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
TPM4-205ENST00000586833 KDRP35968 1356 aa18.85■□□□□ 0.61
TPM4-205ENST00000586833 NEFMP07197 916 aa18.85■□□□□ 0.61
TPM4-205ENST00000586833 C1orf141Q5JVX7 400 aa18.85■□□□□ 0.61
TPM4-205ENST00000586833 SYTL4Q96C24 671 aaPredicted RBP18.85■□□□□ 0.61
TPM4-205ENST00000586833 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
TPM4-205ENST00000586833 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
TPM4-205ENST00000586833 HMOX1P09601 288 aa18.83■□□□□ 0.6
TPM4-205ENST00000586833 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
TPM4-205ENST00000586833 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
TPM4-205ENST00000586833 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
TPM4-205ENST00000586833 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
TPM4-205ENST00000586833 AEBP1Q8IUX7 1158 aa18.83■□□□□ 0.6
TPM4-205ENST00000586833 PNNQ9H307 717 aaKnown RBP18.83■□□□□ 0.6
TPM4-205ENST00000586833 PLSCR1O15162 318 aa18.82■□□□□ 0.6
TPM4-205ENST00000586833 PHKG2P15735 406 aa18.82■□□□□ 0.6
TPM4-205ENST00000586833 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
TPM4-205ENST00000586833 RGPD1P0DJD0 1748 aa18.82■□□□□ 0.6
TPM4-205ENST00000586833 CYP27B1O15528 508 aa18.81■□□□□ 0.6
TPM4-205ENST00000586833 ANP32CO43423 234 aa18.81■□□□□ 0.6
TPM4-205ENST00000586833 NKX1-1Q15270 411 aaPredicted RBP18.81■□□□□ 0.6
TPM4-205ENST00000586833 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
TPM4-205ENST00000586833 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
TPM4-205ENST00000586833 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
TPM4-205ENST00000586833 KCNQ2O43526 872 aa18.79■□□□□ 0.6
TPM4-205ENST00000586833 FCHSD2O94868 740 aa18.79■□□□□ 0.6
TPM4-205ENST00000586833 NBPF14Q5TI25 921 aa18.79■□□□□ 0.6
TPM4-205ENST00000586833 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
TPM4-205ENST00000586833 DCAF5Q96JK2 942 aa18.79■□□□□ 0.6
TPM4-205ENST00000586833 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
TPM4-205ENST00000586833 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
TPM4-205ENST00000586833 CAMKK2Q96RR4 588 aa18.78■□□□□ 0.6
TPM4-205ENST00000586833 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
TPM4-205ENST00000586833 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
TPM4-205ENST00000586833 ERVV-2B6SEH9 535 aa18.76■□□□□ 0.59
TPM4-205ENST00000586833 SMARCC1Q92922 1105 aaPredicted RBP18.76■□□□□ 0.59
TPM4-205ENST00000586833 PRKAR2BP31323 418 aa18.75■□□□□ 0.59
TPM4-205ENST00000586833 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■□□□□ 11.1
TPM4-205ENST00000586833 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
TPM4-205ENST00000586833 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
TPM4-205ENST00000586833 CABP4P57796 275 aa18.73■□□□□ 0.59
TPM4-205ENST00000586833 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
TPM4-205ENST00000586833 PKD1L3Q7Z443 1732 aa18.73■□□□□ 0.59
TPM4-205ENST00000586833 EP400Q96L91 3159 aa18.73■□□□□ 0.59
TPM4-205ENST00000586833 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
TPM4-205ENST00000586833 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
TPM4-205ENST00000586833 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
TPM4-205ENST00000586833 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
TPM4-205ENST00000586833 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
TPM4-205ENST00000586833 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
TPM4-205ENST00000586833 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
TPM4-205ENST00000586833 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
TPM4-205ENST00000586833 PIGBQ92521 554 aa18.68■□□□□ 0.58
TPM4-205ENST00000586833 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
TPM4-205ENST00000586833 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
TPM4-205ENST00000586833 CCNL1Q9UK58 526 aaPredicted RBP18.67■□□□□ 0.58
TPM4-205ENST00000586833 PALLDQ8WX93 1383 aa18.67■□□□□ 0.58
TPM4-205ENST00000586833 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
TPM4-205ENST00000586833 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
TPM4-205ENST00000586833 TEFQ10587 303 aa18.66■□□□□ 0.58
TPM4-205ENST00000586833 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
TPM4-205ENST00000586833 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
TPM4-205ENST00000586833 SLC52A2Q9HAB3 445 aa18.64■□□□□ 0.57
TPM4-205ENST00000586833 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
TPM4-205ENST00000586833 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
TPM4-205ENST00000586833 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
TPM4-205ENST00000586833 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
TPM4-205ENST00000586833 PROM2Q8N271 834 aa18.63■□□□□ 0.57
TPM4-205ENST00000586833 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
TPM4-205ENST00000586833 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
TPM4-205ENST00000586833 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
TPM4-205ENST00000586833 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
TPM4-205ENST00000586833 NFE2L2Q16236 605 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 TTC5Q8N0Z6 440 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 PLEKHF1Q96S99 279 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 LGR6Q9HBX8 967 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
TPM4-205ENST00000586833 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
TPM4-205ENST00000586833 SIK1P57059 783 aa18.6■□□□□ 0.57
TPM4-205ENST00000586833 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
TPM4-205ENST00000586833 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
TPM4-205ENST00000586833 ASAP1Q9ULH1 1129 aa18.6■□□□□ 0.57
TPM4-205ENST00000586833 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
TPM4-205ENST00000586833 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms