RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
LAMA3-205ENST00000586709 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
LAMA3-205ENST00000586709 OVOS2A0A0G2JMS6 1433 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 RREB1Q92766 1687 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 IP6K1Q92551 441 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 POLR3GLQ9BT43 218 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 CARD14Q9BXL6 1004 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 RTL1A6NKG5 1358 aa13.82□□□□□ -0.2
LAMA3-205ENST00000586709 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
LAMA3-205ENST00000586709 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
LAMA3-205ENST00000586709 TNS2Q63HR2 1409 aa13.81□□□□□ -0.2
LAMA3-205ENST00000586709 C11orf95C9JLR9 678 aaPredicted RBP13.8□□□□□ -0.2
LAMA3-205ENST00000586709 TRIM37O94972 964 aa13.8□□□□□ -0.2
LAMA3-205ENST00000586709 FBLN1P23142 703 aa13.8□□□□□ -0.2
LAMA3-205ENST00000586709 HOXC9P31274 260 aa13.8□□□□□ -0.2
LAMA3-205ENST00000586709 AMPHP49418 695 aa13.8□□□□□ -0.2
LAMA3-205ENST00000586709 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
LAMA3-205ENST00000586709 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
LAMA3-205ENST00000586709 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
LAMA3-205ENST00000586709 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
LAMA3-205ENST00000586709 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
LAMA3-205ENST00000586709 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
LAMA3-205ENST00000586709 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
LAMA3-205ENST00000586709 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
LAMA3-205ENST00000586709 NHSQ6T4R5 1651 aa13.78□□□□□ -0.2
LAMA3-205ENST00000586709 EXOC5O00471 708 aa13.77□□□□□ -0.21
LAMA3-205ENST00000586709 BCL9O00512 1426 aa13.77□□□□□ -0.21
LAMA3-205ENST00000586709 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
LAMA3-205ENST00000586709 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
LAMA3-205ENST00000586709 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
LAMA3-205ENST00000586709 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
LAMA3-205ENST00000586709 APBA3O96018 575 aa13.76□□□□□ -0.21
LAMA3-205ENST00000586709 IL2RBP14784 551 aa13.76□□□□□ -0.21
LAMA3-205ENST00000586709 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
LAMA3-205ENST00000586709 FLT4P35916 1363 aa13.75□□□□□ -0.21
LAMA3-205ENST00000586709 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
LAMA3-205ENST00000586709 INSRP06213 1382 aa13.74□□□□□ -0.21
LAMA3-205ENST00000586709 BTAF1O14981 1849 aa13.74□□□□□ -0.21
LAMA3-205ENST00000586709 EZH2Q15910 746 aaKnown RBP13.74□□□□□ -0.21
LAMA3-205ENST00000586709 CAMKK2Q96RR4 588 aa13.74□□□□□ -0.21
LAMA3-205ENST00000586709 PANK3Q9H999 370 aa13.74□□□□□ -0.21
LAMA3-205ENST00000586709 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
LAMA3-205ENST00000586709 NSD2O96028 1365 aa13.72□□□□□ -0.21
LAMA3-205ENST00000586709 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
LAMA3-205ENST00000586709 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
LAMA3-205ENST00000586709 MEGF6O75095 1541 aa13.71□□□□□ -0.21
LAMA3-205ENST00000586709 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
LAMA3-205ENST00000586709 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
LAMA3-205ENST00000586709 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
LAMA3-205ENST00000586709 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
LAMA3-205ENST00000586709 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
LAMA3-205ENST00000586709 LRP5O75197 1615 aa13.7□□□□□ -0.22
LAMA3-205ENST00000586709 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
LAMA3-205ENST00000586709 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
LAMA3-205ENST00000586709 PLSCR1O15162 318 aa13.68□□□□□ -0.22
LAMA3-205ENST00000586709 PPM1GO15355 546 aaPredicted RBP13.68□□□□□ -0.22
LAMA3-205ENST00000586709 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
LAMA3-205ENST00000586709 POLKQ9UBT6 870 aa13.68□□□□□ -0.22
LAMA3-205ENST00000586709 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
LAMA3-205ENST00000586709 WASHC2AQ641Q2 1341 aa13.67□□□□□ -0.22
LAMA3-205ENST00000586709 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
LAMA3-205ENST00000586709 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
LAMA3-205ENST00000586709 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
LAMA3-205ENST00000586709 ITGB4P16144 1822 aa13.67□□□□□ -0.22
LAMA3-205ENST00000586709 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
LAMA3-205ENST00000586709 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
LAMA3-205ENST00000586709 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
LAMA3-205ENST00000586709 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
LAMA3-205ENST00000586709 DCBLD2Q96PD2 775 aa13.66□□□□□ -0.22
LAMA3-205ENST00000586709 LY75O60449 1722 aa13.65□□□□□ -0.22
LAMA3-205ENST00000586709 KCNQ2O43526 872 aa13.65□□□□□ -0.22
LAMA3-205ENST00000586709 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
LAMA3-205ENST00000586709 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
LAMA3-205ENST00000586709 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
LAMA3-205ENST00000586709 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
LAMA3-205ENST00000586709 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
LAMA3-205ENST00000586709 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
LAMA3-205ENST00000586709 CASZ1Q86V15 1759 aa13.63□□□□□ -0.23
LAMA3-205ENST00000586709 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
LAMA3-205ENST00000586709 EYA1Q99502 592 aa13.62□□□□□ -0.23
LAMA3-205ENST00000586709 PCDH11XQ9BZA7 1347 aa13.62□□□□□ -0.23
LAMA3-205ENST00000586709 PCDH11YQ9BZA8 1340 aa13.62□□□□□ -0.23
LAMA3-205ENST00000586709 EIF4A2Q14240 407 aaKnown RBP13.61□□□□□ -0.23
LAMA3-205ENST00000586709 PROM2Q8N271 834 aa13.61□□□□□ -0.23
LAMA3-205ENST00000586709 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
LAMA3-205ENST00000586709 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
LAMA3-205ENST00000586709 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
LAMA3-205ENST00000586709 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
LAMA3-205ENST00000586709 TUBGCP6Q96RT7 1819 aa13.6□□□□□ -0.23
LAMA3-205ENST00000586709 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
LAMA3-205ENST00000586709 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.23
LAMA3-205ENST00000586709 TAF1LQ8IZX4 1826 aa13.58□□□□□ -0.24
LAMA3-205ENST00000586709 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
LAMA3-205ENST00000586709 SYTL4Q96C24 671 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-205ENST00000586709 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
LAMA3-205ENST00000586709 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.24
LAMA3-205ENST00000586709 CYP27B1O15528 508 aa13.57□□□□□ -0.24
LAMA3-205ENST00000586709 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms