RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 USP19O94966 1318 aa11.09□□□□□ -0.63
SMAD4-204ENST00000586253 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
SMAD4-204ENST00000586253 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
SMAD4-204ENST00000586253 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-204ENST00000586253 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
SMAD4-204ENST00000586253 SLIT3O75094 1523 aa11.09□□□□□ -0.63
SMAD4-204ENST00000586253 ERBB3P21860 1342 aa11.09□□□□□ -0.63
SMAD4-204ENST00000586253 USP31Q70CQ4 1352 aa11.08□□□□□ -0.64
SMAD4-204ENST00000586253 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
SMAD4-204ENST00000586253 NLRP6P59044 892 aa11.07□□□□□ -0.64
SMAD4-204ENST00000586253 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
SMAD4-204ENST00000586253 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
SMAD4-204ENST00000586253 CPDO75976 1380 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
SMAD4-204ENST00000586253 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMAD4-204ENST00000586253 C8orf37Q96NL8 207 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
SMAD4-204ENST00000586253 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
SMAD4-204ENST00000586253 KIF3CO14782 793 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 GCP02774 474 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-204ENST00000586253 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-204ENST00000586253 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 NSD3Q9BZ95 1437 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 WASHC2AQ641Q2 1341 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
SMAD4-204ENST00000586253 SLIT2O94813 1529 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
SMAD4-204ENST00000586253 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 NME9Q86XW9 330 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-204ENST00000586253 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-204ENST00000586253 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 AFF2P51816 1311 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 NFAT5O94916 1531 aa11.04□□□□□ -0.64
SMAD4-204ENST00000586253 PANK3Q9H999 370 aa11.03□□□□□ -0.64
SMAD4-204ENST00000586253 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-204ENST00000586253 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
SMAD4-204ENST00000586253 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
SMAD4-204ENST00000586253 BCL9LQ86UU0 1499 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 FYB1O15117 783 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 COG3Q96JB2 828 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 ABCC6O95255 1503 aa11.02□□□□□ -0.65
SMAD4-204ENST00000586253 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
SMAD4-204ENST00000586253 USP21Q9UK80 565 aa11.01□□□□□ -0.65
SMAD4-204ENST00000586253 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
SMAD4-204ENST00000586253 NSD2O96028 1365 aa11.01□□□□□ -0.65
SMAD4-204ENST00000586253 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
SMAD4-204ENST00000586253 RGL2O15211 777 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 ARSIQ5FYB1 569 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 ARHGEF25Q86VW2 580 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 TRPC5Q9UL62 973 aaPredicted RBP11□□□□□ -0.65
SMAD4-204ENST00000586253 ANKRD26Q9UPS8 1709 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 AATKQ6ZMQ8 1374 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 ATRNO75882 1429 aa11□□□□□ -0.65
SMAD4-204ENST00000586253 COL18A1P39060 1754 aa10.99□□□□□ -0.65
SMAD4-204ENST00000586253 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMAD4-204ENST00000586253 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
SMAD4-204ENST00000586253 BTG4Q9NY30 223 aa10.99□□□□□ -0.65
SMAD4-204ENST00000586253 KNSTRNQ9Y448 316 aa10.99□□□□□ -0.65
SMAD4-204ENST00000586253 LTN1O94822 1766 aa10.98□□□□□ -0.65
SMAD4-204ENST00000586253 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-204ENST00000586253 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
SMAD4-204ENST00000586253 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
SMAD4-204ENST00000586253 QTRT2Q9H974 415 aaKnown RBP10.98□□□□□ -0.65
SMAD4-204ENST00000586253 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
SMAD4-204ENST00000586253 STK25O00506 426 aa10.97□□□□□ -0.65
SMAD4-204ENST00000586253 VPS72Q15906 364 aa10.97□□□□□ -0.65
SMAD4-204ENST00000586253 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
SMAD4-204ENST00000586253 NPC1L1Q9UHC9 1359 aa10.97□□□□□ -0.65
SMAD4-204ENST00000586253 COL5A2P05997 1499 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-204ENST00000586253 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-204ENST00000586253 RTL1A6NKG5 1358 aa10.96□□□□□ -0.65
SMAD4-204ENST00000586253 KIF24Q5T7B8 1368 aa10.96□□□□□ -0.65
SMAD4-204ENST00000586253 C2orf72A6NCS6 295 aa10.96□□□□□ -0.65
SMAD4-204ENST00000586253 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
SMAD4-204ENST00000586253 BLMP54132 1417 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-204ENST00000586253 RXRBP28702 533 aa10.95□□□□□ -0.66
SMAD4-204ENST00000586253 GJD4Q96KN9 370 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-204ENST00000586253 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
SMAD4-204ENST00000586253 EVA1CP58658 441 aa10.94□□□□□ -0.66
SMAD4-204ENST00000586253 PAXIP1Q6ZW49 1069 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-204ENST00000586253 GLI3P10071 1580 aa10.94□□□□□ -0.66
SMAD4-204ENST00000586253 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
SMAD4-204ENST00000586253 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
SMAD4-204ENST00000586253 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
SMAD4-204ENST00000586253 ZBTB7CA1YPR0 619 aa10.93□□□□□ -0.66
SMAD4-204ENST00000586253 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms