RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-205ENST00000586039 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
PKN1-205ENST00000586039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.37■■□□□ 1.17
PKN1-205ENST00000586039 FLAD1Q8NFF5 587 aa22.37■■□□□ 1.17
PKN1-205ENST00000586039 DOT1LQ8TEK3 1739 aa22.37■■□□□ 1.17
PKN1-205ENST00000586039 CAPN15O75808 1086 aa22.36■■□□□ 1.17
PKN1-205ENST00000586039 TOMM70O94826 608 aa22.36■■□□□ 1.17
PKN1-205ENST00000586039 NSD2O96028 1365 aa22.36■■□□□ 1.17
PKN1-205ENST00000586039 IGSF1Q8N6C5 1336 aa22.35■■□□□ 1.17
PKN1-205ENST00000586039 HMGB2P26583 209 aaKnown RBP22.35■■□□□ 1.17
PKN1-205ENST00000586039 USP47Q96K76 1375 aa22.35■■□□□ 1.17
PKN1-205ENST00000586039 COL13A1Q5TAT6 717 aaPredicted RBP22.33■■□□□ 1.17
PKN1-205ENST00000586039 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
PKN1-205ENST00000586039 MON2Q7Z3U7 1717 aa22.32■■□□□ 1.16
PKN1-205ENST00000586039 USP54Q70EL1 1684 aa22.32■■□□□ 1.16
PKN1-205ENST00000586039 NME9Q86XW9 330 aa22.31■■□□□ 1.16
PKN1-205ENST00000586039 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
PKN1-205ENST00000586039 ZCRB1Q8TBF4 217 aaKnown RBP22.29■■□□□ 1.16
PKN1-205ENST00000586039 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
PKN1-205ENST00000586039 C5P01031 1676 aa22.29■■□□□ 1.16
PKN1-205ENST00000586039 TNS4Q8IZW8 715 aa22.28■■□□□ 1.16
PKN1-205ENST00000586039 IP6K1Q92551 441 aa22.28■■□□□ 1.16
PKN1-205ENST00000586039 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
PKN1-205ENST00000586039 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
PKN1-205ENST00000586039 PRELPP51888 382 aa22.26■■□□□ 1.15
PKN1-205ENST00000586039 PCNTO95613 3336 aa22.26■■□□□ 1.15
PKN1-205ENST00000586039 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
PKN1-205ENST00000586039 TAF1LQ8IZX4 1826 aa22.23■■□□□ 1.15
PKN1-205ENST00000586039 JMYQ8N9B5 988 aa22.23■■□□□ 1.15
PKN1-205ENST00000586039 AK7Q96M32 723 aa22.23■■□□□ 1.15
PKN1-205ENST00000586039 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
PKN1-205ENST00000586039 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
PKN1-205ENST00000586039 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
PKN1-205ENST00000586039 RBM46Q8TBY0 533 aaKnown RBP22.21■■□□□ 1.15
PKN1-205ENST00000586039 NMRK2Q9NPI5 230 aa22.2■■□□□ 1.14
PKN1-205ENST00000586039 PHF14O94880 888 aa22.19■■□□□ 1.14
PKN1-205ENST00000586039 HTRA3P83110 453 aa22.19■■□□□ 1.14
PKN1-205ENST00000586039 PALLDQ8WX93 1383 aa22.19■■□□□ 1.14
PKN1-205ENST00000586039 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
PKN1-205ENST00000586039 C4BP0C0L5 1744 aa22.18■■□□□ 1.14
PKN1-205ENST00000586039 MEGF6O75095 1541 aa22.18■■□□□ 1.14
PKN1-205ENST00000586039 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
PKN1-205ENST00000586039 CD163L1Q9NR16 1453 aa22.17■■□□□ 1.14
PKN1-205ENST00000586039 EDC4Q6P2E9 1401 aaKnown RBP22.17■■□□□ 1.14
PKN1-205ENST00000586039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.17■■□□□ 1.14
PKN1-205ENST00000586039 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
PKN1-205ENST00000586039 FSTL1Q12841 308 aa22.16■■□□□ 1.14
PKN1-205ENST00000586039 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
PKN1-205ENST00000586039 MPRIPQ6WCQ1 1025 aa22.15■■□□□ 1.14
PKN1-205ENST00000586039 BCS1LQ9Y276 419 aa22.15■■□□□ 1.14
PKN1-205ENST00000586039 UBR3Q6ZT12 1888 aa22.15■■□□□ 1.14
PKN1-205ENST00000586039 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
PKN1-205ENST00000586039 HOXC9P31274 260 aa22.14■■□□□ 1.13
PKN1-205ENST00000586039 AMPHP49418 695 aa22.14■■□□□ 1.13
PKN1-205ENST00000586039 ARHGAP27Q6ZUM4 889 aa22.14■■□□□ 1.13
PKN1-205ENST00000586039 AMIGO3Q86WK7 504 aa22.14■■□□□ 1.13
PKN1-205ENST00000586039 SMARCC1Q92922 1105 aaPredicted RBP22.14■■□□□ 1.13
PKN1-205ENST00000586039 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.13
PKN1-205ENST00000586039 SSFA2P28290 1259 aa22.13■■□□□ 1.13
PKN1-205ENST00000586039 RAPGEF4Q8WZA2 1011 aa22.13■■□□□ 1.13
PKN1-205ENST00000586039 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
PKN1-205ENST00000586039 MAP3K19Q56UN5 1328 aa22.11■■□□□ 1.13
PKN1-205ENST00000586039 TGFB2P61812 414 aa22.11■■□□□ 1.13
PKN1-205ENST00000586039 SMIM5Q71RC9 77 aa22.11■■□□□ 1.13
PKN1-205ENST00000586039 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
PKN1-205ENST00000586039 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
PKN1-205ENST00000586039 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
PKN1-205ENST00000586039 PXDNLA1KZ92 1463 aa22.1■■□□□ 1.13
PKN1-205ENST00000586039 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
PKN1-205ENST00000586039 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
PKN1-205ENST00000586039 PLEKHG2Q9H7P9 1386 aa22.09■■□□□ 1.13
PKN1-205ENST00000586039 N4BP2Q86UW6 1770 aaPredicted RBP22.08■■□□□ 1.13
PKN1-205ENST00000586039 MMP10P09238 476 aa22.08■■□□□ 1.13
PKN1-205ENST00000586039 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.13
PKN1-205ENST00000586039 COG3Q96JB2 828 aa22.08■■□□□ 1.13
PKN1-205ENST00000586039 NBPF4Q96M43 638 aa22.08■■□□□ 1.13
PKN1-205ENST00000586039 KIF13BQ9NQT8 1826 aa22.08■■□□□ 1.12
PKN1-205ENST00000586039 KDM2BQ8NHM5 1336 aa22.07■■□□□ 1.12
PKN1-205ENST00000586039 A0A0G2JLW4 131 aa22.07■■□□□ 1.12
PKN1-205ENST00000586039 A0A1W2PP64 1363 aa22.07■■□□□ 1.12
PKN1-205ENST00000586039 FCHSD2O94868 740 aa22.06■■□□□ 1.12
PKN1-205ENST00000586039 C9orf131Q5VYM1 1079 aa22.06■■□□□ 1.12
PKN1-205ENST00000586039 USHBP1Q8N6Y0 703 aa22.06■■□□□ 1.12
PKN1-205ENST00000586039 ITGB4P16144 1822 aa22.05■■□□□ 1.12
PKN1-205ENST00000586039 KIAA1551Q9HCM1 1747 aa22.05■■□□□ 1.12
PKN1-205ENST00000586039 GNPATO15228 680 aa22.04■■□□□ 1.12
PKN1-205ENST00000586039 SMG6Q86US8 1419 aaKnown RBP22.04■■□□□ 1.12
PKN1-205ENST00000586039 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
PKN1-205ENST00000586039 FBLN1P23142 703 aa22.03■■□□□ 1.12
PKN1-205ENST00000586039 LINC00116Q8NCU8 138 aa22.03■■□□□ 1.12
PKN1-205ENST00000586039 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
PKN1-205ENST00000586039 HSPA1AP0DMV8 641 aaKnown RBP22.02■■□□□ 1.12
PKN1-205ENST00000586039 HSPA1BP0DMV9 641 aaKnown RBP22.02■■□□□ 1.12
PKN1-205ENST00000586039 SIK1P57059 783 aa22.02■■□□□ 1.12
PKN1-205ENST00000586039 SMC1BQ8NDV3 1235 aa22.02■■□□□ 1.12
PKN1-205ENST00000586039 RRAGCQ9HB90 399 aa22.02■■□□□ 1.12
PKN1-205ENST00000586039 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
PKN1-205ENST00000586039 DPEP1P16444 411 aa22.01■■□□□ 1.11
PKN1-205ENST00000586039 PIGBQ92521 554 aa22.01■■□□□ 1.11
PKN1-205ENST00000586039 CCDC87Q9NVE4 849 aa22.01■■□□□ 1.11
PKN1-205ENST00000586039 C10orf71Q711Q0 1435 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms