RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ANKRD24Q8TF21 1146 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 NLRP1Q9C000 1473 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 TTC5Q8N0Z6 440 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 GNAI2P04899 355 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 MYL6BP14649 208 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
SMARCA4-208ENST00000585799 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 FLIIQ13045 1269 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 AGLP35573 1532 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 FAM135BQ49AJ0 1406 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 MYO5BQ9ULV0 1848 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 USP6P35125 1406 aa15.4■□□□□ 0.06
SMARCA4-208ENST00000585799 PRDM11Q9NQV5 511 aa15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 ZBTB7BO15156 539 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 NBPF6Q5VWK0 638 aa15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 NBPF4Q96M43 638 aa15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 KCNJ4P48050 445 aa15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
SMARCA4-208ENST00000585799 MYOM1P52179 1685 aa15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 CHL1O00533 1208 aa15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 HDAC1Q13547 482 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 GNAI3P08754 354 aa15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 RIC3Q7Z5B4 369 aa15.38■□□□□ 0.05
SMARCA4-208ENST00000585799 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 MAP4K4O95819 1239 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 TOM1L2Q6ZVM7 507 aa15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 CPS1P31327 1500 aa15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 SRCIN1Q9C0H9 1055 aa15.37■□□□□ 0.05
SMARCA4-208ENST00000585799 ARHGAP45Q92619 1136 aa15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 SYTL4Q96C24 671 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 LRRFIP2Q9Y608 721 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 AATKQ6ZMQ8 1374 aa15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 CDC45O75419 566 aa15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 PIP4K2AP48426 406 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-208ENST00000585799 ARHGEF28Q8N1W1 1705 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 IP6K1Q92551 441 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 CD163L1Q9NR16 1453 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 NUCB1Q02818 461 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 SMC5Q8IY18 1101 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 PHAXQ9H814 394 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 C19orf44Q9H6X5 657 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 ANO2Q9NQ90 1003 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
SMARCA4-208ENST00000585799 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
SMARCA4-208ENST00000585799 KCNQ3O43525 872 aa15.33■□□□□ 0.05
SMARCA4-208ENST00000585799 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-208ENST00000585799 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.05
SMARCA4-208ENST00000585799 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
SMARCA4-208ENST00000585799 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-208ENST00000585799 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 SIL1Q9H173 461 aa15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 FOXD4L6Q3SYB3 417 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 FOXD4L3Q6VB84 417 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-208ENST00000585799 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 DDX58O95786 925 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 MCCP23508 829 aa15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 PTPRCP08575 1304 aa15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 MYO3AQ8NEV4 1616 aa15.31■□□□□ 0.04
SMARCA4-208ENST00000585799 CABP4P57796 275 aa15.3■□□□□ 0.04
SMARCA4-208ENST00000585799 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
SMARCA4-208ENST00000585799 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
SMARCA4-208ENST00000585799 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
SMARCA4-208ENST00000585799 MSH6P52701 1360 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 MAP3K5Q99683 1374 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 GOLGA6L22H0YM25 854 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 TBC1D32Q96NH3 1257 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 SPG7Q9UQ90 795 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 AMOTQ4VCS5 1084 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 CEP85Q6P2H3 762 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
SMARCA4-208ENST00000585799 CDK12Q9NYV4 1490 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms