RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 EP400Q96L91 3159 aa18.66■□□□□ 0.58
PRKCSH-202ENST00000585540 SHANK3Q9BYB0 1731 aa18.66■□□□□ 0.58
PRKCSH-202ENST00000585540 MTHFSP49914 203 aa18.65■□□□□ 0.58
PRKCSH-202ENST00000585540 BCL11BQ9C0K0 894 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-202ENST00000585540 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
PRKCSH-202ENST00000585540 KDRP35968 1356 aa18.64■□□□□ 0.57
PRKCSH-202ENST00000585540 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-202ENST00000585540 TRIM37O94972 964 aa18.63■□□□□ 0.57
PRKCSH-202ENST00000585540 FAM182BQ5T319 152 aa18.63■□□□□ 0.57
PRKCSH-202ENST00000585540 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
PRKCSH-202ENST00000585540 IL13P35225 146 aa18.62■□□□□ 0.57
PRKCSH-202ENST00000585540 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
PRKCSH-202ENST00000585540 PLSCR1O15162 318 aa18.61■□□□□ 0.57
PRKCSH-202ENST00000585540 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-202ENST00000585540 DDX10Q13206 875 aaKnown RBP18.61■□□□□ 0.57
PRKCSH-202ENST00000585540 AMOTQ4VCS5 1084 aa18.61■□□□□ 0.57
PRKCSH-202ENST00000585540 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-202ENST00000585540 RALBP1Q15311 655 aa18.6■□□□□ 0.57
PRKCSH-202ENST00000585540 APBA3O96018 575 aa18.59■□□□□ 0.57
PRKCSH-202ENST00000585540 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-202ENST00000585540 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-202ENST00000585540 RREB1Q92766 1687 aa18.59■□□□□ 0.57
PRKCSH-202ENST00000585540 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.56
PRKCSH-202ENST00000585540 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-202ENST00000585540 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
PRKCSH-202ENST00000585540 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
PRKCSH-202ENST00000585540 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
PRKCSH-202ENST00000585540 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
PRKCSH-202ENST00000585540 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
PRKCSH-202ENST00000585540 DEFB132Q7Z7B7 95 aa18.56■□□□□ 0.56
PRKCSH-202ENST00000585540 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
PRKCSH-202ENST00000585540 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
PRKCSH-202ENST00000585540 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-202ENST00000585540 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
PRKCSH-202ENST00000585540 BTAF1O14981 1849 aa18.53■□□□□ 0.56
PRKCSH-202ENST00000585540 CYP27B1O15528 508 aa18.52■□□□□ 0.56
PRKCSH-202ENST00000585540 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.55
PRKCSH-202ENST00000585540 PHKG2P15735 406 aa18.51■□□□□ 0.55
PRKCSH-202ENST00000585540 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-202ENST00000585540 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
PRKCSH-202ENST00000585540 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-202ENST00000585540 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
PRKCSH-202ENST00000585540 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
PRKCSH-202ENST00000585540 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
PRKCSH-202ENST00000585540 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
PRKCSH-202ENST00000585540 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
PRKCSH-202ENST00000585540 DCAF5Q96JK2 942 aa18.48■□□□□ 0.55
PRKCSH-202ENST00000585540 LY75O60449 1722 aa18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 TOGARAM1Q9Y4F4 1720 aa18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 KCNQ2O43526 872 aa18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-202ENST00000585540 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
PRKCSH-202ENST00000585540 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
PRKCSH-202ENST00000585540 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-202ENST00000585540 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-202ENST00000585540 ITGB4P16144 1822 aa18.46■□□□□ 0.55
PRKCSH-202ENST00000585540 FCHSD2O94868 740 aa18.45■□□□□ 0.54
PRKCSH-202ENST00000585540 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
PRKCSH-202ENST00000585540 HMOX1P09601 288 aa18.44■□□□□ 0.54
PRKCSH-202ENST00000585540 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-202ENST00000585540 NEFMP07197 916 aa18.43■□□□□ 0.54
PRKCSH-202ENST00000585540 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
PRKCSH-202ENST00000585540 ADAMTS7Q9UKP4 1686 aa18.43■□□□□ 0.54
PRKCSH-202ENST00000585540 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-202ENST00000585540 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
PRKCSH-202ENST00000585540 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
PRKCSH-202ENST00000585540 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
PRKCSH-202ENST00000585540 PAPPAQ13219 1627 aa18.41■□□□□ 0.54
PRKCSH-202ENST00000585540 MRC1P22897 1456 aa18.41■□□□□ 0.54
PRKCSH-202ENST00000585540 PTF1AQ7RTS3 328 aa18.41■□□□□ 0.54
PRKCSH-202ENST00000585540 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
PRKCSH-202ENST00000585540 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
PRKCSH-202ENST00000585540 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
PRKCSH-202ENST00000585540 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
PRKCSH-202ENST00000585540 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
PRKCSH-202ENST00000585540 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-202ENST00000585540 PROM2Q8N271 834 aa18.38■□□□□ 0.53
PRKCSH-202ENST00000585540 STK32BQ9NY57 414 aa18.38■□□□□ 0.53
PRKCSH-202ENST00000585540 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
PRKCSH-202ENST00000585540 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
PRKCSH-202ENST00000585540 CABP4P57796 275 aa18.37■□□□□ 0.53
PRKCSH-202ENST00000585540 PIGBQ92521 554 aa18.37■□□□□ 0.53
PRKCSH-202ENST00000585540 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-202ENST00000585540 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-202ENST00000585540 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-202ENST00000585540 LRP5O75197 1615 aa18.35■□□□□ 0.53
PRKCSH-202ENST00000585540 GNAT3A8MTJ3 354 aa18.35■□□□□ 0.53
PRKCSH-202ENST00000585540 C5P01031 1676 aa18.34■□□□□ 0.53
PRKCSH-202ENST00000585540 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-202ENST00000585540 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-202ENST00000585540 SLC15A2Q16348 729 aa18.34■□□□□ 0.53
PRKCSH-202ENST00000585540 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
PRKCSH-202ENST00000585540 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.53
PRKCSH-202ENST00000585540 ANP32CO43423 234 aa18.33■□□□□ 0.52
PRKCSH-202ENST00000585540 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-202ENST00000585540 TAF1LQ8IZX4 1826 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms