RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-206ENST00000585460 ARXQ96QS3 562 aa22.85■■□□□ 1.25
PRKAR1A-206ENST00000585460 RTL1A6NKG5 1358 aa22.83■■□□□ 1.25
PRKAR1A-206ENST00000585460 SLC16A10Q8TF71 515 aa22.81■■□□□ 1.24
PRKAR1A-206ENST00000585460 RAPGEF4Q8WZA2 1011 aa22.81■■□□□ 1.24
PRKAR1A-206ENST00000585460 MEGF6O75095 1541 aa22.81■■□□□ 1.24
PRKAR1A-206ENST00000585460 CGNL1Q0VF96 1302 aa22.81■■□□□ 1.24
PRKAR1A-206ENST00000585460 NSD2O96028 1365 aa22.8■■□□□ 1.24
PRKAR1A-206ENST00000585460 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
PRKAR1A-206ENST00000585460 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
PRKAR1A-206ENST00000585460 INSRP06213 1382 aa22.79■■□□□ 1.24
PRKAR1A-206ENST00000585460 TATP17735 454 aaPredicted RBP22.79■■□□□ 1.24
PRKAR1A-206ENST00000585460 PNPLA7Q6ZV29 1317 aa22.79■■□□□ 1.24
PRKAR1A-206ENST00000585460 PAPPAQ13219 1627 aa22.79■■□□□ 1.24
PRKAR1A-206ENST00000585460 BTAF1O14981 1849 aa22.78■■□□□ 1.24
PRKAR1A-206ENST00000585460 MYOM1P52179 1685 aa22.77■■□□□ 1.24
PRKAR1A-206ENST00000585460 CCNL1Q9UK58 526 aaPredicted RBP22.76■■□□□ 1.23
PRKAR1A-206ENST00000585460 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
PRKAR1A-206ENST00000585460 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
PRKAR1A-206ENST00000585460 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
PRKAR1A-206ENST00000585460 FLT4P35916 1363 aa22.75■■□□□ 1.23
PRKAR1A-206ENST00000585460 KIF24Q5T7B8 1368 aa22.74■■□□□ 1.23
PRKAR1A-206ENST00000585460 SMG6Q86US8 1419 aaKnown RBP22.74■■□□□ 1.23
PRKAR1A-206ENST00000585460 CYP27B1O15528 508 aa22.73■■□□□ 1.23
PRKAR1A-206ENST00000585460 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
PRKAR1A-206ENST00000585460 POLD1P28340 1107 aa22.72■■□□□ 1.23
PRKAR1A-206ENST00000585460 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
PRKAR1A-206ENST00000585460 PPM1GO15355 546 aaPredicted RBP22.71■■□□□ 1.23
PRKAR1A-206ENST00000585460 COL23A1Q86Y22 540 aaPredicted RBP22.71■■□□□ 1.23
PRKAR1A-206ENST00000585460 NSD3Q9BZ95 1437 aa22.71■■□□□ 1.23
PRKAR1A-206ENST00000585460 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
PRKAR1A-206ENST00000585460 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
PRKAR1A-206ENST00000585460 MPRIPQ6WCQ1 1025 aa22.69■■□□□ 1.22
PRKAR1A-206ENST00000585460 ZNF784Q8NCA9 323 aaPredicted RBP22.69■■□□□ 1.22
PRKAR1A-206ENST00000585460 RGPD2P0DJD1 1756 aa22.68■■□□□ 1.22
PRKAR1A-206ENST00000585460 WASHC2AQ641Q2 1341 aa22.68■■□□□ 1.22
PRKAR1A-206ENST00000585460 MSH5O43196 834 aa22.67■■□□□ 1.22
PRKAR1A-206ENST00000585460 GPR162Q16538 588 aa22.67■■□□□ 1.22
PRKAR1A-206ENST00000585460 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
PRKAR1A-206ENST00000585460 POLKQ9UBT6 870 aa22.67■■□□□ 1.22
PRKAR1A-206ENST00000585460 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
PRKAR1A-206ENST00000585460 NKX1-1Q15270 411 aaPredicted RBP22.66■■□□□ 1.22
PRKAR1A-206ENST00000585460 EYA1Q99502 592 aa22.66■■□□□ 1.22
PRKAR1A-206ENST00000585460 PIGBQ92521 554 aa22.65■■□□□ 1.22
PRKAR1A-206ENST00000585460 NLGN2Q8NFZ4 835 aa22.64■■□□□ 1.21
PRKAR1A-206ENST00000585460 POLR3GLQ9BT43 218 aa22.64■■□□□ 1.21
PRKAR1A-206ENST00000585460 SHANK3Q9BYB0 1731 aa22.64■■□□□ 1.21
PRKAR1A-206ENST00000585460 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
PRKAR1A-206ENST00000585460 PALLDQ8WX93 1383 aa22.63■■□□□ 1.21
PRKAR1A-206ENST00000585460 DOT1LQ8TEK3 1739 aa22.62■■□□□ 1.21
PRKAR1A-206ENST00000585460 UTRNP46939 3433 aa22.62■■□□□ 1.21
PRKAR1A-206ENST00000585460 SMARCC1Q92922 1105 aaPredicted RBP22.62■■□□□ 1.21
PRKAR1A-206ENST00000585460 HMGB2P26583 209 aaKnown RBP22.61■■□□□ 1.21
PRKAR1A-206ENST00000585460 MSL1Q68DK7 614 aa22.61■■□□□ 1.21
PRKAR1A-206ENST00000585460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.61■■□□□ 1.211e-9■■□□□ 11.5
PRKAR1A-206ENST00000585460 NCAPD2Q15021 1401 aa22.6■■□□□ 1.21
PRKAR1A-206ENST00000585460 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
PRKAR1A-206ENST00000585460 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
PRKAR1A-206ENST00000585460 FLAD1Q8NFF5 587 aa22.59■■□□□ 1.21
PRKAR1A-206ENST00000585460 LY75O60449 1722 aa22.59■■□□□ 1.21
PRKAR1A-206ENST00000585460 HSPA5P11021 654 aaKnown RBP22.58■■□□□ 1.21
PRKAR1A-206ENST00000585460 EIF4A2Q14240 407 aaKnown RBP22.58■■□□□ 1.21
PRKAR1A-206ENST00000585460 AMIGO3Q86WK7 504 aa22.58■■□□□ 1.21
PRKAR1A-206ENST00000585460 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
PRKAR1A-206ENST00000585460 SMIM5Q71RC9 77 aa22.57■■□□□ 1.2
PRKAR1A-206ENST00000585460 PANK3Q9H999 370 aa22.57■■□□□ 1.2
PRKAR1A-206ENST00000585460 QSER1Q2KHR3 1735 aa22.55■■□□□ 1.2
PRKAR1A-206ENST00000585460 PHKG2P15735 406 aa22.55■■□□□ 1.2
PRKAR1A-206ENST00000585460 IFNL2Q8IZJ0 200 aa22.55■■□□□ 1.2
PRKAR1A-206ENST00000585460 ASAP1Q9ULH1 1129 aa22.55■■□□□ 1.2
PRKAR1A-206ENST00000585460 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
PRKAR1A-206ENST00000585460 LOC102724428A0A0B4J2F2 783 aa22.54■■□□□ 1.2
PRKAR1A-206ENST00000585460 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.22e-6■■□□□ 11.4
PRKAR1A-206ENST00000585460 SIK1P57059 783 aa22.54■■□□□ 1.2
PRKAR1A-206ENST00000585460 AK7Q96M32 723 aa22.54■■□□□ 1.2
PRKAR1A-206ENST00000585460 TMOD3Q9NYL9 352 aa22.54■■□□□ 1.2
PRKAR1A-206ENST00000585460 COL24A1Q17RW2 1714 aa22.53■■□□□ 1.2
PRKAR1A-206ENST00000585460 LINC00116Q8NCU8 138 aa22.52■■□□□ 1.2
PRKAR1A-206ENST00000585460 CD2APQ9Y5K6 639 aa22.52■■□□□ 1.2
PRKAR1A-206ENST00000585460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.51■■□□□ 1.19
PRKAR1A-206ENST00000585460 ATG3Q9NT62 314 aa22.51■■□□□ 1.19
PRKAR1A-206ENST00000585460 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
PRKAR1A-206ENST00000585460 GRIN3BO60391 1043 aa22.5■■□□□ 1.19
PRKAR1A-206ENST00000585460 PHF14O94880 888 aa22.5■■□□□ 1.19
PRKAR1A-206ENST00000585460 ITPK1Q13572 414 aa22.5■■□□□ 1.19
PRKAR1A-206ENST00000585460 ATP6V1AP38606 617 aa22.48■■□□□ 1.19
PRKAR1A-206ENST00000585460 IGSF1Q8N6C5 1336 aa22.48■■□□□ 1.19
PRKAR1A-206ENST00000585460 SSFA2P28290 1259 aa22.47■■□□□ 1.19
PRKAR1A-206ENST00000585460 C1QTNF8P60827 252 aa22.46■■□□□ 1.19
PRKAR1A-206ENST00000585460 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
PRKAR1A-206ENST00000585460 ERVV-2B6SEH9 535 aa22.45■■□□□ 1.18
PRKAR1A-206ENST00000585460 PLEKHO1Q53GL0 409 aaPredicted RBP22.45■■□□□ 1.18
PRKAR1A-206ENST00000585460 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
PRKAR1A-206ENST00000585460 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.18
PRKAR1A-206ENST00000585460 TOGARAM1Q9Y4F4 1720 aa22.45■■□□□ 1.18
PRKAR1A-206ENST00000585460 GNPATO15228 680 aa22.44■■□□□ 1.18
PRKAR1A-206ENST00000585460 SLC4A9Q96Q91 983 aa22.44■■□□□ 1.18
PRKAR1A-206ENST00000585460 DCAF5Q96JK2 942 aa22.43■■□□□ 1.18
PRKAR1A-206ENST00000585460 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
PRKAR1A-206ENST00000585460 ANKRD26Q9UPS8 1709 aa22.43■■□□□ 1.18
PRKAR1A-206ENST00000585460 C5P01031 1676 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms