RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	ARX	Q96QS3	562 aa		22.85	■■□□□ 1.25
PRKAR1A-206	ENST00000585460	RTL1	A6NKG5	1358 aa		22.83	■■□□□ 1.25
PRKAR1A-206	ENST00000585460	SLC16A10	Q8TF71	515 aa		22.81	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	RAPGEF4	Q8WZA2	1011 aa		22.81	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	MEGF6	O75095	1541 aa		22.81	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	CGNL1	Q0VF96	1302 aa		22.81	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	NSD2	O96028	1365 aa		22.8	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	TFCP2L1	Q9NZI6	479 aa		22.8	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	TIMELESS	Q9UNS1	1208 aa		22.8	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	INSR	P06213	1382 aa		22.79	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	TAT	P17735	454 aa	Predicted RBP	22.79	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	PNPLA7	Q6ZV29	1317 aa		22.79	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	PAPPA	Q13219	1627 aa		22.79	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	BTAF1	O14981	1849 aa		22.78	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	MYOM1	P52179	1685 aa		22.77	■■□□□ 1.24
PRKAR1A-206	ENST00000585460	CCNL1	Q9UK58	526 aa	Predicted RBP	22.76	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	EMILIN1	Q9Y6C2	1016 aa		22.76	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	KAT6B	Q8WYB5	2073 aa		22.76	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	FAM208A	Q9UK61	1670 aa	Known RBP	22.75	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	FLT4	P35916	1363 aa		22.75	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	KIF24	Q5T7B8	1368 aa		22.74	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	SMG6	Q86US8	1419 aa	Known RBP	22.74	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	CYP27B1	O15528	508 aa		22.73	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	MAP3K5	Q99683	1374 aa		22.73	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	POLD1	P28340	1107 aa		22.72	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	PCGF6	Q9BYE7	350 aa		22.72	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	PPM1G	O15355	546 aa	Predicted RBP	22.71	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	COL23A1	Q86Y22	540 aa	Predicted RBP	22.71	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	NSD3	Q9BZ95	1437 aa		22.71	■■□□□ 1.23
PRKAR1A-206	ENST00000585460	PCDH11X	Q9BZA7	1347 aa		22.7	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	PCDH11Y	Q9BZA8	1340 aa		22.7	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	MPRIP	Q6WCQ1	1025 aa		22.69	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	ZNF784	Q8NCA9	323 aa	Predicted RBP	22.69	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	RGPD2	P0DJD1	1756 aa		22.68	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	WASHC2A	Q641Q2	1341 aa		22.68	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	MSH5	O43196	834 aa		22.67	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	GPR162	Q16538	588 aa		22.67	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	KLHL34	Q8N239	644 aa		22.67	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	POLK	Q9UBT6	870 aa		22.67	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	CLSPN	Q9HAW4	1339 aa		22.66	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	NKX1-1	Q15270	411 aa	Predicted RBP	22.66	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	EYA1	Q99502	592 aa		22.66	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	PIGB	Q92521	554 aa		22.65	■■□□□ 1.22
PRKAR1A-206	ENST00000585460	NLGN2	Q8NFZ4	835 aa		22.64	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	POLR3GL	Q9BT43	218 aa		22.64	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	SHANK3	Q9BYB0	1731 aa		22.64	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	SPG7	Q9UQ90	795 aa		22.63	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	PALLD	Q8WX93	1383 aa		22.63	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	DOT1L	Q8TEK3	1739 aa		22.62	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	UTRN	P46939	3433 aa		22.62	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	SMARCC1	Q92922	1105 aa	Predicted RBP	22.62	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	HMGB2	P26583	209 aa	Known RBP	22.61	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	MSL1	Q68DK7	614 aa		22.61	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	22.61	■■□□□ 1.21	1e-9	■■□□□ 11.5
PRKAR1A-206	ENST00000585460	NCAPD2	Q15021	1401 aa		22.6	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	TNNT2	P45379	298 aa	Predicted RBP	22.6	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	PELP1	Q8IZL8	1130 aa	Known RBP	22.59	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	FLAD1	Q8NFF5	587 aa		22.59	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	LY75	O60449	1722 aa		22.59	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	HSPA5	P11021	654 aa	Known RBP	22.58	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	EIF4A2	Q14240	407 aa	Known RBP	22.58	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	AMIGO3	Q86WK7	504 aa		22.58	■■□□□ 1.21
PRKAR1A-206	ENST00000585460	EIF4G2	P78344	907 aa	Known RBP eCLIP	22.57	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	SMIM5	Q71RC9	77 aa		22.57	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	PANK3	Q9H999	370 aa		22.57	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	QSER1	Q2KHR3	1735 aa		22.55	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	PHKG2	P15735	406 aa		22.55	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	IFNL2	Q8IZJ0	200 aa		22.55	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	ASAP1	Q9ULH1	1129 aa		22.55	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	KIF20B	Q96Q89	1820 aa		22.54	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	LOC102724428	A0A0B4J2F2	783 aa		22.54	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	YBX3	P16989	372 aa	Known RBP eCLIP	22.54	■■□□□ 1.2	2e-6	■■□□□ 11.4
PRKAR1A-206	ENST00000585460	SIK1	P57059	783 aa		22.54	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	AK7	Q96M32	723 aa		22.54	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	TMOD3	Q9NYL9	352 aa		22.54	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	COL24A1	Q17RW2	1714 aa		22.53	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	LINC00116	Q8NCU8	138 aa		22.52	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	CD2AP	Q9Y5K6	639 aa		22.52	■■□□□ 1.2
PRKAR1A-206	ENST00000585460	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	22.51	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	ATG3	Q9NT62	314 aa		22.51	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	TUBGCP6	Q96RT7	1819 aa		22.5	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	GRIN3B	O60391	1043 aa		22.5	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	PHF14	O94880	888 aa		22.5	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	ITPK1	Q13572	414 aa		22.5	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	ATP6V1A	P38606	617 aa		22.48	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	IGSF1	Q8N6C5	1336 aa		22.48	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	SSFA2	P28290	1259 aa		22.47	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	C1QTNF8	P60827	252 aa		22.46	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	CCER1	Q8TC90	406 aa	Predicted RBP	22.46	■■□□□ 1.19
PRKAR1A-206	ENST00000585460	ERVV-2	B6SEH9	535 aa		22.45	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	PLEKHO1	Q53GL0	409 aa	Predicted RBP	22.45	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	MORC1	Q86VD1	984 aa		22.45	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	PKD1L3	Q7Z443	1732 aa		22.45	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	TOGARAM1	Q9Y4F4	1720 aa		22.45	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	GNPAT	O15228	680 aa		22.44	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	SLC4A9	Q96Q91	983 aa		22.44	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	DCAF5	Q96JK2	942 aa		22.43	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	MAP2	P11137	1827 aa	Known RBP	22.43	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	ANKRD26	Q9UPS8	1709 aa		22.43	■■□□□ 1.18
PRKAR1A-206	ENST00000585460	C5	P01031	1676 aa		22.42	■■□□□ 1.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms