RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 EXOC5O00471 708 aa11.85□□□□□ -0.51
ATG4D-202ENST00000585437 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
ATG4D-202ENST00000585437 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
ATG4D-202ENST00000585437 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
ATG4D-202ENST00000585437 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
ATG4D-202ENST00000585437 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-202ENST00000585437 KNSTRNQ9Y448 316 aa11.84□□□□□ -0.51
ATG4D-202ENST00000585437 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
ATG4D-202ENST00000585437 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
ATG4D-202ENST00000585437 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.52
ATG4D-202ENST00000585437 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-202ENST00000585437 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
ATG4D-202ENST00000585437 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
ATG4D-202ENST00000585437 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
ATG4D-202ENST00000585437 PLSCR1O15162 318 aa11.81□□□□□ -0.52
ATG4D-202ENST00000585437 APBA3O96018 575 aa11.81□□□□□ -0.52
ATG4D-202ENST00000585437 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
ATG4D-202ENST00000585437 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
ATG4D-202ENST00000585437 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
ATG4D-202ENST00000585437 TNNT2P45379 298 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-202ENST00000585437 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
ATG4D-202ENST00000585437 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
ATG4D-202ENST00000585437 C5P01031 1676 aa11.8□□□□□ -0.52
ATG4D-202ENST00000585437 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
ATG4D-202ENST00000585437 KDRP35968 1356 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 PPM1GO15355 546 aaPredicted RBP11.79□□□□□ -0.52
ATG4D-202ENST00000585437 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
ATG4D-202ENST00000585437 RAPGEF4Q8WZA2 1011 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 EYA1Q99502 592 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
ATG4D-202ENST00000585437 KCNQ2O43526 872 aa11.78□□□□□ -0.52
ATG4D-202ENST00000585437 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
ATG4D-202ENST00000585437 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
ATG4D-202ENST00000585437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATG4D-202ENST00000585437 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
ATG4D-202ENST00000585437 CYP27B1O15528 508 aa11.75□□□□□ -0.53
ATG4D-202ENST00000585437 PROM2Q8N271 834 aa11.75□□□□□ -0.53
ATG4D-202ENST00000585437 DDX54Q8TDD1 881 aaKnown RBP11.75□□□□□ -0.53
ATG4D-202ENST00000585437 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
ATG4D-202ENST00000585437 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
ATG4D-202ENST00000585437 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
ATG4D-202ENST00000585437 IL13P35225 146 aa11.74□□□□□ -0.53
ATG4D-202ENST00000585437 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
ATG4D-202ENST00000585437 MTHFSP49914 203 aa11.73□□□□□ -0.53
ATG4D-202ENST00000585437 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
ATG4D-202ENST00000585437 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
ATG4D-202ENST00000585437 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
ATG4D-202ENST00000585437 MRC1P22897 1456 aa11.72□□□□□ -0.53
ATG4D-202ENST00000585437 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-202ENST00000585437 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
ATG4D-202ENST00000585437 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
ATG4D-202ENST00000585437 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
ATG4D-202ENST00000585437 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
ATG4D-202ENST00000585437 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
ATG4D-202ENST00000585437 KDM6AO15550 1401 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-202ENST00000585437 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.53
ATG4D-202ENST00000585437 TJP1Q07157 1748 aa11.7□□□□□ -0.54
ATG4D-202ENST00000585437 PHKG2P15735 406 aa11.7□□□□□ -0.54
ATG4D-202ENST00000585437 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
ATG4D-202ENST00000585437 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
ATG4D-202ENST00000585437 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
ATG4D-202ENST00000585437 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
ATG4D-202ENST00000585437 LRRC4BQ9NT99 713 aa11.69□□□□□ -0.54
ATG4D-202ENST00000585437 DIAPH1O60610 1272 aaKnown RBP11.68□□□□□ -0.54
ATG4D-202ENST00000585437 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
ATG4D-202ENST00000585437 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
ATG4D-202ENST00000585437 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
ATG4D-202ENST00000585437 AMOTQ4VCS5 1084 aa11.67□□□□□ -0.54
ATG4D-202ENST00000585437 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
ATG4D-202ENST00000585437 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
ATG4D-202ENST00000585437 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
ATG4D-202ENST00000585437 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
ATG4D-202ENST00000585437 SLC15A2Q16348 729 aa11.66□□□□□ -0.54
ATG4D-202ENST00000585437 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
ATG4D-202ENST00000585437 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
ATG4D-202ENST00000585437 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
ATG4D-202ENST00000585437 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
ATG4D-202ENST00000585437 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
ATG4D-202ENST00000585437 ZNF530Q6P9A1 599 aaPredicted RBP11.64□□□□□ -0.55
ATG4D-202ENST00000585437 MPRIPQ6WCQ1 1025 aa11.64□□□□□ -0.55
ATG4D-202ENST00000585437 PIGBQ92521 554 aa11.64□□□□□ -0.55
ATG4D-202ENST00000585437 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
ATG4D-202ENST00000585437 ERVV-2B6SEH9 535 aa11.63□□□□□ -0.55
ATG4D-202ENST00000585437 HSP90AB1P08238 724 aaKnown RBP11.63□□□□□ -0.55
ATG4D-202ENST00000585437 HMOX1P09601 288 aa11.63□□□□□ -0.55
ATG4D-202ENST00000585437 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
ATG4D-202ENST00000585437 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
ATG4D-202ENST00000585437 CNGB1Q14028 1251 aaPredicted RBP11.62□□□□□ -0.55
ATG4D-202ENST00000585437 SMARCC1Q92922 1105 aaPredicted RBP11.62□□□□□ -0.55
ATG4D-202ENST00000585437 CFAP53Q96M91 514 aa11.62□□□□□ -0.55
ATG4D-202ENST00000585437 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
ATG4D-202ENST00000585437 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
ATG4D-202ENST00000585437 KCNQ4P56696 695 aa11.61□□□□□ -0.55
ATG4D-202ENST00000585437 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
ATG4D-202ENST00000585437 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
ATG4D-202ENST00000585437 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
ATG4D-202ENST00000585437 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms