RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
CSNK1D-225ENST00000584913 AMER1Q5JTC6 1135 aaPredicted RBP22.93■■□□□ 1.26
CSNK1D-225ENST00000584913 NBPF14Q5TI25 921 aa22.92■■□□□ 1.26
CSNK1D-225ENST00000584913 PCDH11XQ9BZA7 1347 aa22.91■■□□□ 1.26
CSNK1D-225ENST00000584913 PCDH11YQ9BZA8 1340 aa22.91■■□□□ 1.26
CSNK1D-225ENST00000584913 PER1O15534 1290 aaPredicted RBP22.91■■□□□ 1.26
CSNK1D-225ENST00000584913 BTAF1O14981 1849 aa22.9■■□□□ 1.26
CSNK1D-225ENST00000584913 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
CSNK1D-225ENST00000584913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.9■■□□□ 1.26
CSNK1D-225ENST00000584913 DOT1LQ8TEK3 1739 aa22.88■■□□□ 1.25
CSNK1D-225ENST00000584913 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
CSNK1D-225ENST00000584913 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
CSNK1D-225ENST00000584913 DDX54Q8TDD1 881 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-225ENST00000584913 IGSF1Q8N6C5 1336 aa22.86■■□□□ 1.25
CSNK1D-225ENST00000584913 KCNQ2O43526 872 aa22.86■■□□□ 1.25
CSNK1D-225ENST00000584913 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
CSNK1D-225ENST00000584913 EYA1Q99502 592 aa22.86■■□□□ 1.25
CSNK1D-225ENST00000584913 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
CSNK1D-225ENST00000584913 EIF4A2Q14240 407 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-225ENST00000584913 R3HDM1Q15032 1099 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-225ENST00000584913 PAPPAQ13219 1627 aa22.84■■□□□ 1.25
CSNK1D-225ENST00000584913 TXNRD1Q16881 649 aa22.84■■□□□ 1.25
CSNK1D-225ENST00000584913 PSDA5PKW4 1024 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-225ENST00000584913 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-225ENST00000584913 PROM2Q8N271 834 aa22.83■■□□□ 1.25
CSNK1D-225ENST00000584913 ACSBG1Q96GR2 724 aa22.83■■□□□ 1.25
CSNK1D-225ENST00000584913 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
CSNK1D-225ENST00000584913 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-225ENST00000584913 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
CSNK1D-225ENST00000584913 LY75O60449 1722 aa22.8■■□□□ 1.24
CSNK1D-225ENST00000584913 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
CSNK1D-225ENST00000584913 KDRP35968 1356 aa22.79■■□□□ 1.24
CSNK1D-225ENST00000584913 CYP27B1O15528 508 aa22.78■■□□□ 1.24
CSNK1D-225ENST00000584913 SRCAPQ6ZRS2 3230 aa22.78■■□□□ 1.24
CSNK1D-225ENST00000584913 CASZ1Q86V15 1759 aa22.78■■□□□ 1.24
CSNK1D-225ENST00000584913 PRIM1P49642 420 aaKnown RBP22.76■■□□□ 1.23
CSNK1D-225ENST00000584913 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-225ENST00000584913 TOGARAM1Q9Y4F4 1720 aa22.76■■□□□ 1.23
CSNK1D-225ENST00000584913 QSER1Q2KHR3 1735 aa22.75■■□□□ 1.23
CSNK1D-225ENST00000584913 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
CSNK1D-225ENST00000584913 SLC15A2Q16348 729 aa22.74■■□□□ 1.23
CSNK1D-225ENST00000584913 AMOTQ4VCS5 1084 aa22.74■■□□□ 1.23
CSNK1D-225ENST00000584913 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
CSNK1D-225ENST00000584913 IL13P35225 146 aa22.73■■□□□ 1.23
CSNK1D-225ENST00000584913 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
CSNK1D-225ENST00000584913 ITGB4P16144 1822 aa22.71■■□□□ 1.23
CSNK1D-225ENST00000584913 PHKG2P15735 406 aa22.71■■□□□ 1.23
CSNK1D-225ENST00000584913 MTHFSP49914 203 aa22.71■■□□□ 1.23
CSNK1D-225ENST00000584913 HSP90AB1P08238 724 aaKnown RBP22.7■■□□□ 1.22
CSNK1D-225ENST00000584913 PLEKHO1Q53GL0 409 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-225ENST00000584913 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
CSNK1D-225ENST00000584913 KAT6BQ8WYB5 2073 aa22.69■■□□□ 1.22
CSNK1D-225ENST00000584913 COL3A1P02461 1466 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-225ENST00000584913 SMARCC1Q92922 1105 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-225ENST00000584913 LRRC4BQ9NT99 713 aa22.69■■□□□ 1.22
CSNK1D-225ENST00000584913 SPON1Q9HCB6 807 aa22.68■■□□□ 1.22
CSNK1D-225ENST00000584913 AKT1S1Q96B36 256 aa22.66■■□□□ 1.22
CSNK1D-225ENST00000584913 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
CSNK1D-225ENST00000584913 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
CSNK1D-225ENST00000584913 DIAPH1O60610 1272 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-225ENST00000584913 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
CSNK1D-225ENST00000584913 ZNF831Q5JPB2 1677 aa22.65■■□□□ 1.22
CSNK1D-225ENST00000584913 ERVV-2B6SEH9 535 aa22.64■■□□□ 1.21
CSNK1D-225ENST00000584913 CCNL1Q9UK58 526 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-225ENST00000584913 C5P01031 1676 aa22.64■■□□□ 1.21
CSNK1D-225ENST00000584913 MPRIPQ6WCQ1 1025 aa22.63■■□□□ 1.21
CSNK1D-225ENST00000584913 AEBP1Q8IUX7 1158 aa22.62■■□□□ 1.21
CSNK1D-225ENST00000584913 SLC16A10Q8TF71 515 aa22.62■■□□□ 1.21
CSNK1D-225ENST00000584913 PIGBQ92521 554 aa22.62■■□□□ 1.21
CSNK1D-225ENST00000584913 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
CSNK1D-225ENST00000584913 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
CSNK1D-225ENST00000584913 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
CSNK1D-225ENST00000584913 MTFR1LQ9H019 292 aa22.61■■□□□ 1.21
CSNK1D-225ENST00000584913 TAF1LQ8IZX4 1826 aa22.61■■□□□ 1.21
CSNK1D-225ENST00000584913 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
CSNK1D-225ENST00000584913 KDM6AO15550 1401 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-225ENST00000584913 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
CSNK1D-225ENST00000584913 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
CSNK1D-225ENST00000584913 ADAMTS7Q9UKP4 1686 aa22.58■■□□□ 1.21
CSNK1D-225ENST00000584913 TUBGCP6Q96RT7 1819 aa22.58■■□□□ 1.21
CSNK1D-225ENST00000584913 AKAP4Q5JQC9 854 aa22.57■■□□□ 1.2
CSNK1D-225ENST00000584913 MRC1P22897 1456 aa22.57■■□□□ 1.2
CSNK1D-225ENST00000584913 CICQ96RK0 1608 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-225ENST00000584913 SCN11AQ9UI33 1791 aa22.56■■□□□ 1.2
CSNK1D-225ENST00000584913 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
CSNK1D-225ENST00000584913 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
CSNK1D-225ENST00000584913 FLAD1Q8NFF5 587 aa22.55■■□□□ 1.2
CSNK1D-225ENST00000584913 PPP2R1AP30153 589 aa22.54■■□□□ 1.2
CSNK1D-225ENST00000584913 PTGER2P43116 358 aa22.54■■□□□ 1.2
CSNK1D-225ENST00000584913 TFCP2L1Q9NZI6 479 aa22.54■■□□□ 1.2
CSNK1D-225ENST00000584913 LOC102724428A0A0B4J2F2 783 aa22.53■■□□□ 1.2
CSNK1D-225ENST00000584913 SIK1P57059 783 aa22.53■■□□□ 1.2
CSNK1D-225ENST00000584913 SGIP1Q9BQI5 828 aa22.53■■□□□ 1.2
CSNK1D-225ENST00000584913 PDGFDQ9GZP0 370 aaPredicted RBP22.53■■□□□ 1.2
CSNK1D-225ENST00000584913 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
CSNK1D-225ENST00000584913 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
CSNK1D-225ENST00000584913 MAP3K5Q99683 1374 aa22.51■■□□□ 1.19
CSNK1D-225ENST00000584913 ZBTB7AO95365 584 aa22.51■■□□□ 1.19
CSNK1D-225ENST00000584913 ATG3Q9NT62 314 aa22.51■■□□□ 1.19
CSNK1D-225ENST00000584913 HMOX1P09601 288 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms