RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-224ENST00000584672 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
CSNK1D-224ENST00000584672 NSD2O96028 1365 aa20.28■□□□□ 0.84
CSNK1D-224ENST00000584672 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
CSNK1D-224ENST00000584672 SBNO2Q9Y2G9 1366 aa20.27■□□□□ 0.84
CSNK1D-224ENST00000584672 L3MBTL2Q969R5 705 aa20.27■□□□□ 0.84
CSNK1D-224ENST00000584672 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
CSNK1D-224ENST00000584672 CD163L1Q9NR16 1453 aa20.26■□□□□ 0.83
CSNK1D-224ENST00000584672 ROCK2O75116 1388 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-224ENST00000584672 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-224ENST00000584672 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
CSNK1D-224ENST00000584672 ADCY9O60503 1353 aa20.24■□□□□ 0.83
CSNK1D-224ENST00000584672 C5P01031 1676 aa20.22■□□□□ 0.83
CSNK1D-224ENST00000584672 IP6K1Q92551 441 aa20.21■□□□□ 0.83
CSNK1D-224ENST00000584672 MEGF6O75095 1541 aa20.21■□□□□ 0.83
CSNK1D-224ENST00000584672 USP47Q96K76 1375 aa20.21■□□□□ 0.83
CSNK1D-224ENST00000584672 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-224ENST00000584672 ZCRB1Q8TBF4 217 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-224ENST00000584672 SLC12A5Q9H2X9 1139 aa20.19■□□□□ 0.82
CSNK1D-224ENST00000584672 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
CSNK1D-224ENST00000584672 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-224ENST00000584672 FBLN1P23142 703 aa20.17■□□□□ 0.82
CSNK1D-224ENST00000584672 TAF1LQ8IZX4 1826 aa20.17■□□□□ 0.82
CSNK1D-224ENST00000584672 SMIM5Q71RC9 77 aa20.16■□□□□ 0.82
CSNK1D-224ENST00000584672 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
CSNK1D-224ENST00000584672 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
CSNK1D-224ENST00000584672 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
CSNK1D-224ENST00000584672 SIN3AQ96ST3 1273 aa20.15■□□□□ 0.82
CSNK1D-224ENST00000584672 MAP3K19Q56UN5 1328 aa20.14■□□□□ 0.81
CSNK1D-224ENST00000584672 KIF3CO14782 793 aa20.14■□□□□ 0.81
CSNK1D-224ENST00000584672 AMPHP49418 695 aa20.14■□□□□ 0.81
CSNK1D-224ENST00000584672 PHF14O94880 888 aa20.13■□□□□ 0.81
CSNK1D-224ENST00000584672 HOXC9P31274 260 aa20.13■□□□□ 0.81
CSNK1D-224ENST00000584672 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
CSNK1D-224ENST00000584672 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
CSNK1D-224ENST00000584672 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
CSNK1D-224ENST00000584672 PALLDQ8WX93 1383 aa20.11■□□□□ 0.81
CSNK1D-224ENST00000584672 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
CSNK1D-224ENST00000584672 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
CSNK1D-224ENST00000584672 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
CSNK1D-224ENST00000584672 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
CSNK1D-224ENST00000584672 AK7Q96M32 723 aa20.09■□□□□ 0.81
CSNK1D-224ENST00000584672 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
CSNK1D-224ENST00000584672 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.81
CSNK1D-224ENST00000584672 COG3Q96JB2 828 aa20.08■□□□□ 0.81
CSNK1D-224ENST00000584672 NBPF4Q96M43 638 aa20.08■□□□□ 0.81
CSNK1D-224ENST00000584672 APLP1P51693 650 aa20.07■□□□□ 0.8
CSNK1D-224ENST00000584672 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-224ENST00000584672 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
CSNK1D-224ENST00000584672 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
CSNK1D-224ENST00000584672 ITGB4P16144 1822 aa20.06■□□□□ 0.8
CSNK1D-224ENST00000584672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-224ENST00000584672 CAPN15O75808 1086 aa20.04■□□□□ 0.8
CSNK1D-224ENST00000584672 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-224ENST00000584672 CICQ96RK0 1608 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-224ENST00000584672 DNAJC5GQ8N7S2 189 aa20.03■□□□□ 0.8
CSNK1D-224ENST00000584672 N4BP2Q86UW6 1770 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-224ENST00000584672 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
CSNK1D-224ENST00000584672 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.79
CSNK1D-224ENST00000584672 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.79
CSNK1D-224ENST00000584672 HTRA3P83110 453 aa20.01■□□□□ 0.79
CSNK1D-224ENST00000584672 NMRK2Q9NPI5 230 aa20.01■□□□□ 0.79
CSNK1D-224ENST00000584672 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
CSNK1D-224ENST00000584672 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
CSNK1D-224ENST00000584672 RTL1A6NKG5 1358 aa20■□□□□ 0.79
CSNK1D-224ENST00000584672 TOMM70O94826 608 aa20■□□□□ 0.79
CSNK1D-224ENST00000584672 KIAA1551Q9HCM1 1747 aa19.99■□□□□ 0.79
CSNK1D-224ENST00000584672 CYP27B1O15528 508 aa19.99■□□□□ 0.79
CSNK1D-224ENST00000584672 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
CSNK1D-224ENST00000584672 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
CSNK1D-224ENST00000584672 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
CSNK1D-224ENST00000584672 BCS1LQ9Y276 419 aa19.98■□□□□ 0.79
CSNK1D-224ENST00000584672 NSD3Q9BZ95 1437 aa19.98■□□□□ 0.79
CSNK1D-224ENST00000584672 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
CSNK1D-224ENST00000584672 SSFA2P28290 1259 aa19.97■□□□□ 0.79
CSNK1D-224ENST00000584672 COL13A1Q5TAT6 717 aaPredicted RBP19.97■□□□□ 0.79
CSNK1D-224ENST00000584672 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
CSNK1D-224ENST00000584672 GNPATO15228 680 aa19.96■□□□□ 0.79
CSNK1D-224ENST00000584672 MMP10P09238 476 aa19.96■□□□□ 0.79
CSNK1D-224ENST00000584672 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
CSNK1D-224ENST00000584672 PIGBQ92521 554 aa19.96■□□□□ 0.79
CSNK1D-224ENST00000584672 A0A0G2JLW4 131 aa19.95■□□□□ 0.78
CSNK1D-224ENST00000584672 HMGB2P26583 209 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-224ENST00000584672 ARHGAP27Q6ZUM4 889 aa19.95■□□□□ 0.78
CSNK1D-224ENST00000584672 KIF13BQ9NQT8 1826 aa19.95■□□□□ 0.78
CSNK1D-224ENST00000584672 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
CSNK1D-224ENST00000584672 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
CSNK1D-224ENST00000584672 SIK1P57059 783 aa19.93■□□□□ 0.78
CSNK1D-224ENST00000584672 ITPK1Q13572 414 aa19.93■□□□□ 0.78
CSNK1D-224ENST00000584672 KLRG1Q96E93 195 aa19.91■□□□□ 0.78
CSNK1D-224ENST00000584672 FCHSD2O94868 740 aa19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 C16orf71Q8IYS4 520 aaPredicted RBP19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 PUS7Q96PZ0 661 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 ASAP1Q9ULH1 1129 aa19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 INSRP06213 1382 aa19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 KIF20BQ96Q89 1820 aa19.9■□□□□ 0.78
CSNK1D-224ENST00000584672 FYB1O15117 783 aa19.89■□□□□ 0.77
CSNK1D-224ENST00000584672 ATP6V1AP38606 617 aa19.89■□□□□ 0.77
CSNK1D-224ENST00000584672 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
CSNK1D-224ENST00000584672 RBM46Q8TBY0 533 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms