RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 INSRP06213 1382 aa28.47■■■□□ 2.15
TOP3A-218ENST00000584669 KIF24Q5T7B8 1368 aa28.47■■■□□ 2.15
TOP3A-218ENST00000584669 NSD2O96028 1365 aa28.46■■■□□ 2.15
TOP3A-218ENST00000584669 PPM1GO15355 546 aaPredicted RBP28.45■■■□□ 2.14
TOP3A-218ENST00000584669 KNSTRNQ9Y448 316 aa28.45■■■□□ 2.14
TOP3A-218ENST00000584669 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
TOP3A-218ENST00000584669 SHANK3Q9BYB0 1731 aa28.43■■■□□ 2.14
TOP3A-218ENST00000584669 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
TOP3A-218ENST00000584669 POLKQ9UBT6 870 aa28.43■■■□□ 2.14
TOP3A-218ENST00000584669 NBPF6Q5VWK0 638 aa28.42■■■□□ 2.14
TOP3A-218ENST00000584669 NBPF4Q96M43 638 aa28.42■■■□□ 2.14
TOP3A-218ENST00000584669 BTAF1O14981 1849 aa28.41■■■□□ 2.14
TOP3A-218ENST00000584669 ZBTB7AO95365 584 aa28.41■■■□□ 2.14
TOP3A-218ENST00000584669 CASZ1Q86V15 1759 aa28.4■■■□□ 2.14
TOP3A-218ENST00000584669 SLC15A2Q16348 729 aa28.4■■■□□ 2.14
TOP3A-218ENST00000584669 USHBP1Q8N6Y0 703 aa28.4■■■□□ 2.14
TOP3A-218ENST00000584669 AMER1Q5JTC6 1135 aaPredicted RBP28.39■■■□□ 2.14
TOP3A-218ENST00000584669 PER1O15534 1290 aaPredicted RBP28.38■■■□□ 2.13
TOP3A-218ENST00000584669 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
TOP3A-218ENST00000584669 SYTL4Q96C24 671 aaPredicted RBP28.38■■■□□ 2.13
TOP3A-218ENST00000584669 MEGF6O75095 1541 aa28.38■■■□□ 2.13
TOP3A-218ENST00000584669 ZCRB1Q8TBF4 217 aaKnown RBP28.37■■■□□ 2.13
TOP3A-218ENST00000584669 ATF5Q9Y2D1 282 aaPredicted RBP28.36■■■□□ 2.13
TOP3A-218ENST00000584669 RAPGEF4Q8WZA2 1011 aa28.34■■■□□ 2.13
TOP3A-218ENST00000584669 PRIM1P49642 420 aaKnown RBP28.32■■■□□ 2.12
TOP3A-218ENST00000584669 DOT1LQ8TEK3 1739 aa28.31■■■□□ 2.12
TOP3A-218ENST00000584669 CC2D1BQ5T0F9 858 aaKnown RBP28.3■■■□□ 2.12
TOP3A-218ENST00000584669 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
TOP3A-218ENST00000584669 TATP17735 454 aaPredicted RBP28.29■■■□□ 2.12
TOP3A-218ENST00000584669 ZNF827Q17R98 1081 aa28.29■■■□□ 2.12
TOP3A-218ENST00000584669 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
TOP3A-218ENST00000584669 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
TOP3A-218ENST00000584669 EIF4A2Q14240 407 aaKnown RBP28.28■■■□□ 2.12
TOP3A-218ENST00000584669 PKD1L3Q7Z443 1732 aa28.28■■■□□ 2.12
TOP3A-218ENST00000584669 DCAF8L1A6NGE4 600 aa28.27■■■□□ 2.12
TOP3A-218ENST00000584669 EYA1Q99502 592 aa28.27■■■□□ 2.12
TOP3A-218ENST00000584669 PTGER2P43116 358 aa28.26■■■□□ 2.11
TOP3A-218ENST00000584669 KCNQ4P56696 695 aa28.26■■■□□ 2.11
TOP3A-218ENST00000584669 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
TOP3A-218ENST00000584669 MTFR1LQ9H019 292 aa28.26■■■□□ 2.11
TOP3A-218ENST00000584669 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
TOP3A-218ENST00000584669 NPC1L1Q9UHC9 1359 aa28.23■■■□□ 2.11
TOP3A-218ENST00000584669 PCDH11XQ9BZA7 1347 aa28.21■■■□□ 2.11
TOP3A-218ENST00000584669 PCDH11YQ9BZA8 1340 aa28.21■■■□□ 2.11
TOP3A-218ENST00000584669 AKT1S1Q96B36 256 aa28.19■■■□□ 2.1
TOP3A-218ENST00000584669 FHDC1Q9C0D6 1143 aaPredicted RBP28.18■■■□□ 2.1
TOP3A-218ENST00000584669 TFCP2L1Q9NZI6 479 aa28.18■■■□□ 2.1
TOP3A-218ENST00000584669 CCNL1Q9UK58 526 aaPredicted RBP28.18■■■□□ 2.1
TOP3A-218ENST00000584669 MTHFSP49914 203 aa28.17■■■□□ 2.1
TOP3A-218ENST00000584669 ITGB4P16144 1822 aa28.17■■■□□ 2.1
TOP3A-218ENST00000584669 IGSF1Q8N6C5 1336 aa28.17■■■□□ 2.1
TOP3A-218ENST00000584669 TOGARAM1Q9Y4F4 1720 aa28.16■■■□□ 2.1
TOP3A-218ENST00000584669 YY1P25490 414 aa28.16■■■□□ 2.1
TOP3A-218ENST00000584669 SGIP1Q9BQI5 828 aa28.15■■■□□ 2.1
TOP3A-218ENST00000584669 LY75O60449 1722 aa28.15■■■□□ 2.1
TOP3A-218ENST00000584669 ARXQ96QS3 562 aa28.14■■■□□ 2.1
TOP3A-218ENST00000584669 CYP27B1O15528 508 aa28.13■■■□□ 2.09
TOP3A-218ENST00000584669 PNPLA7Q6ZV29 1317 aa28.13■■■□□ 2.09
TOP3A-218ENST00000584669 IL13P35225 146 aa28.12■■■□□ 2.09
TOP3A-218ENST00000584669 MPRIPQ6WCQ1 1025 aa28.12■■■□□ 2.09
TOP3A-218ENST00000584669 SYT17Q9BSW7 474 aa28.12■■■□□ 2.09
TOP3A-218ENST00000584669 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
TOP3A-218ENST00000584669 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
TOP3A-218ENST00000584669 TUBGCP6Q96RT7 1819 aa28.09■■■□□ 2.09
TOP3A-218ENST00000584669 MSH5O43196 834 aa28.09■■■□□ 2.09
TOP3A-218ENST00000584669 AEBP1Q8IUX7 1158 aa28.09■■■□□ 2.09
TOP3A-218ENST00000584669 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
TOP3A-218ENST00000584669 QSER1Q2KHR3 1735 aa28.08■■■□□ 2.09
TOP3A-218ENST00000584669 PALLDQ8WX93 1383 aa28.08■■■□□ 2.09
TOP3A-218ENST00000584669 POLD1P28340 1107 aa28.07■■■□□ 2.08
TOP3A-218ENST00000584669 COL3A1P02461 1466 aaPredicted RBP28.07■■■□□ 2.08
TOP3A-218ENST00000584669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.06■■■□□ 2.08
TOP3A-218ENST00000584669 SULT6B1Q6IMI4 303 aa28.05■■■□□ 2.08
TOP3A-218ENST00000584669 VIRMAQ69YN4 1812 aaKnown RBP28.04■■■□□ 2.08
TOP3A-218ENST00000584669 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
TOP3A-218ENST00000584669 KDRP35968 1356 aa28.02■■■□□ 2.08
TOP3A-218ENST00000584669 DIAPH1O60610 1272 aaKnown RBP28.02■■■□□ 2.08
TOP3A-218ENST00000584669 PLEKHG2Q9H7P9 1386 aa28.01■■■□□ 2.07
TOP3A-218ENST00000584669 NKX1-1Q15270 411 aaPredicted RBP28.01■■■□□ 2.07
TOP3A-218ENST00000584669 SMARCC1Q92922 1105 aaPredicted RBP28.01■■■□□ 2.07
TOP3A-218ENST00000584669 C5P01031 1676 aa28■■■□□ 2.07
TOP3A-218ENST00000584669 PHKG2P15735 406 aa28■■■□□ 2.07
TOP3A-218ENST00000584669 COL23A1Q86Y22 540 aaPredicted RBP28■■■□□ 2.07
TOP3A-218ENST00000584669 PIGBQ92521 554 aa28■■■□□ 2.07
TOP3A-218ENST00000584669 IFNL2Q8IZJ0 200 aa27.99■■■□□ 2.07
TOP3A-218ENST00000584669 MAP3K5Q99683 1374 aa27.99■■■□□ 2.07
TOP3A-218ENST00000584669 HMOX1P09601 288 aa27.98■■■□□ 2.07
TOP3A-218ENST00000584669 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
TOP3A-218ENST00000584669 PLEKHO1Q53GL0 409 aaPredicted RBP27.98■■■□□ 2.07
TOP3A-218ENST00000584669 MSL1Q68DK7 614 aa27.98■■■□□ 2.07
TOP3A-218ENST00000584669 TMOD3Q9NYL9 352 aa27.98■■■□□ 2.07
TOP3A-218ENST00000584669 DDX10Q13206 875 aaKnown RBP27.97■■■□□ 2.07
TOP3A-218ENST00000584669 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.07
TOP3A-218ENST00000584669 HMGB2P26583 209 aaKnown RBP27.95■■■□□ 2.06
TOP3A-218ENST00000584669 ZNF530Q6P9A1 599 aaPredicted RBP27.95■■■□□ 2.06
TOP3A-218ENST00000584669 AK7Q96M32 723 aa27.95■■■□□ 2.06
TOP3A-218ENST00000584669 SCN11AQ9UI33 1791 aa27.95■■■□□ 2.06
TOP3A-218ENST00000584669 AMOTQ4VCS5 1084 aa27.94■■■□□ 2.06
TOP3A-218ENST00000584669 PELP1Q8IZL8 1130 aaKnown RBP27.94■■■□□ 2.06
TOP3A-218ENST00000584669 GPR162Q16538 588 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 362.1 ms