RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-217ENST00000584582 NEK4P51957 841 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 GBP4Q96PP9 640 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 HSPA2P54652 639 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 STRN4Q9NRL3 753 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 TRIM44Q96DX7 344 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-217ENST00000584582 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
TOP3A-217ENST00000584582 MROH1Q8NDA8 1641 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 MCCP23508 829 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TOP3A-217ENST00000584582 PI4KAP2A4QPH2 592 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 PI4KAP1Q8N8J0 262 aa13.87□□□□□ -0.19
TOP3A-217ENST00000584582 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
TOP3A-217ENST00000584582 ST18O60284 1047 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 GNAI3P08754 354 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 HOXC9P31274 260 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 FGD1P98174 961 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-217ENST00000584582 SRCIN1Q9C0H9 1055 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-217ENST00000584582 TRAK2O60296 914 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
TOP3A-217ENST00000584582 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
TOP3A-217ENST00000584582 ADGRB1O14514 1584 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 KCNQ3O43525 872 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-217ENST00000584582 TBX22Q9Y458 520 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 CHPF2Q9P2E5 772 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 ZFYVE9O95405 1425 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 CHL1O00533 1208 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 REC8O95072 547 aa13.85□□□□□ -0.19
TOP3A-217ENST00000584582 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 SDSP20132 328 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 NBPF6Q5VWK0 638 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 NBPF4Q96M43 638 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 CEP85Q6P2H3 762 aa13.84□□□□□ -0.19
TOP3A-217ENST00000584582 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.19
TOP3A-217ENST00000584582 LAMC1P11047 1609 aa13.83□□□□□ -0.19
TOP3A-217ENST00000584582 PTCD1O75127 700 aaKnown RBP13.83□□□□□ -0.2
TOP3A-217ENST00000584582 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-217ENST00000584582 PTPRMP28827 1452 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 MSH6P52701 1360 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
TOP3A-217ENST00000584582 MCM4P33991 863 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 EVA1CP58658 441 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
TOP3A-217ENST00000584582 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
TOP3A-217ENST00000584582 CAMSAP1Q5T5Y3 1602 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 FLT4P35916 1363 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 DIAPH3Q9NSV4 1193 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
TOP3A-217ENST00000584582 USP19O94966 1318 aa13.81□□□□□ -0.2
TOP3A-217ENST00000584582 GCP02774 474 aa13.81□□□□□ -0.2
TOP3A-217ENST00000584582 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
TOP3A-217ENST00000584582 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
TOP3A-217ENST00000584582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-217ENST00000584582 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-217ENST00000584582 NEXNQ0ZGT2 675 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 SSFA2P28290 1259 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
TOP3A-217ENST00000584582 DEPDC5O75140 1603 aa13.8□□□□□ -0.2
TOP3A-217ENST00000584582 MX1P20591 662 aa13.79□□□□□ -0.2
TOP3A-217ENST00000584582 PA2G4Q9UQ80 394 aaKnown RBP13.79□□□□□ -0.2
TOP3A-217ENST00000584582 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
TOP3A-217ENST00000584582 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
TOP3A-217ENST00000584582 TTC22Q5TAA0 569 aa13.79□□□□□ -0.2
TOP3A-217ENST00000584582 DCTPP1Q9H773 170 aa13.79□□□□□ -0.2
TOP3A-217ENST00000584582 ERC2O15083 957 aa13.79□□□□□ -0.2
TOP3A-217ENST00000584582 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
TOP3A-217ENST00000584582 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 CLASRPQ8N2M8 674 aaKnown RBP13.78□□□□□ -0.2
TOP3A-217ENST00000584582 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 CCDC8Q9H0W5 538 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms