RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 SMG6Q86US8 1419 aaKnown RBP8.86□□□□□ -0.99
CDH8-212ENST00000584506 PNPLA6Q8IY17 1366 aa8.86□□□□□ -0.99
CDH8-212ENST00000584506 PPM1GO15355 546 aaPredicted RBP8.85□□□□□ -0.99
CDH8-212ENST00000584506 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
CDH8-212ENST00000584506 LTN1O94822 1766 aa8.85□□□□□ -0.99
CDH8-212ENST00000584506 KIF24Q5T7B8 1368 aa8.85□□□□□ -0.99
CDH8-212ENST00000584506 ALS2Q96Q42 1657 aa8.85□□□□□ -0.99
CDH8-212ENST00000584506 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
CDH8-212ENST00000584506 ST18O60284 1047 aa8.84□□□□□ -0.99
CDH8-212ENST00000584506 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
CDH8-212ENST00000584506 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH8-212ENST00000584506 MS4A4AQ96JQ5 239 aa8.84□□□□□ -0.99
CDH8-212ENST00000584506 SBNO1A3KN83 1393 aa8.84□□□□□ -0.99
CDH8-212ENST00000584506 LTBP4Q8N2S1 1624 aa8.83□□□□□ -1
CDH8-212ENST00000584506 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
CDH8-212ENST00000584506 NEFMP07197 916 aa8.83□□□□□ -1
CDH8-212ENST00000584506 PDE3BQ13370 1112 aa8.83□□□□□ -1
CDH8-212ENST00000584506 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
CDH8-212ENST00000584506 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
CDH8-212ENST00000584506 RUNDC1Q96C34 613 aa8.83□□□□□ -1
CDH8-212ENST00000584506 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
CDH8-212ENST00000584506 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
CDH8-212ENST00000584506 FCHSD2O94868 740 aa8.82□□□□□ -1
CDH8-212ENST00000584506 FBLN1P23142 703 aa8.82□□□□□ -1
CDH8-212ENST00000584506 AMPHP49418 695 aa8.82□□□□□ -1
CDH8-212ENST00000584506 XPCQ01831 940 aaPredicted RBP8.82□□□□□ -1
CDH8-212ENST00000584506 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
CDH8-212ENST00000584506 BRINP3Q76B58 766 aa8.82□□□□□ -1
CDH8-212ENST00000584506 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
CDH8-212ENST00000584506 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
CDH8-212ENST00000584506 FLT4P35916 1363 aa8.82□□□□□ -1
CDH8-212ENST00000584506 MAP3K19Q56UN5 1328 aa8.81□□□□□ -1
CDH8-212ENST00000584506 PHRF1Q9P1Y6 1649 aaKnown RBP8.81□□□□□ -1
CDH8-212ENST00000584506 PEAK1Q9H792 1746 aa8.81□□□□□ -1
CDH8-212ENST00000584506 FBXO22Q8NEZ5 403 aa8.81□□□□□ -1
CDH8-212ENST00000584506 MFRPQ9BY79 579 aa8.81□□□□□ -1
CDH8-212ENST00000584506 ARHGEF10O15013 1369 aa8.81□□□□□ -1
CDH8-212ENST00000584506 MAPK8IP3Q9UPT6 1336 aa8.8□□□□□ -1
CDH8-212ENST00000584506 SLIT3O75094 1523 aa8.8□□□□□ -1
CDH8-212ENST00000584506 NHSL1Q5SYE7 1610 aa8.8□□□□□ -1
CDH8-212ENST00000584506 APAF1O14727 1248 aa8.8□□□□□ -1
CDH8-212ENST00000584506 IL13P35225 146 aa8.8□□□□□ -1
CDH8-212ENST00000584506 CCDC146Q8IYE0 955 aa8.8□□□□□ -1
CDH8-212ENST00000584506 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
CDH8-212ENST00000584506 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
CDH8-212ENST00000584506 RTL1A6NKG5 1358 aa8.8□□□□□ -1
CDH8-212ENST00000584506 PXDNQ92626 1479 aa8.8□□□□□ -1
CDH8-212ENST00000584506 TNS3Q68CZ2 1445 aa8.8□□□□□ -1
CDH8-212ENST00000584506 USP19O94966 1318 aa8.8□□□□□ -1
CDH8-212ENST00000584506 SPATA31A3Q5VYP0 1347 aa8.8□□□□□ -1
CDH8-212ENST00000584506 GCP02774 474 aa8.79□□□□□ -1
CDH8-212ENST00000584506 TCP11L2Q8N4U5 519 aa8.79□□□□□ -1
CDH8-212ENST00000584506 NFAT5O94916 1531 aa8.79□□□□□ -1
CDH8-212ENST00000584506 SOS2Q07890 1332 aaPredicted RBP8.79□□□□□ -1
CDH8-212ENST00000584506 RGPD1P0DJD0 1748 aa8.78□□□□□ -1
CDH8-212ENST00000584506 TOM1O60784 492 aa8.78□□□□□ -1
CDH8-212ENST00000584506 HOXC9P31274 260 aa8.78□□□□□ -1
CDH8-212ENST00000584506 EIF4A2Q14240 407 aaKnown RBP8.78□□□□□ -1
CDH8-212ENST00000584506 HSP90AB2PQ58FF8 381 aa8.78□□□□□ -1
CDH8-212ENST00000584506 IP6K1Q92551 441 aa8.78□□□□□ -1
CDH8-212ENST00000584506 RGPD5Q99666 1765 aa8.78□□□□□ -1
CDH8-212ENST00000584506 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
CDH8-212ENST00000584506 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
CDH8-212ENST00000584506 CCDC27Q2M243 656 aa8.77□□□□□ -1.01
CDH8-212ENST00000584506 ARHGEF25Q86VW2 580 aa8.77□□□□□ -1.01
CDH8-212ENST00000584506 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
CDH8-212ENST00000584506 PLEKHF1Q96S99 279 aa8.77□□□□□ -1.01
CDH8-212ENST00000584506 DLG5Q8TDM6 1919 aa8.77□□□□□ -1.01
CDH8-212ENST00000584506 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
CDH8-212ENST00000584506 IQSEC2Q5JU85 1478 aa8.77□□□□□ -1.01
CDH8-212ENST00000584506 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
CDH8-212ENST00000584506 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
CDH8-212ENST00000584506 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
CDH8-212ENST00000584506 ABCC6O95255 1503 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 HMOX1P09601 288 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 TMPOP42166 694 aaKnown RBP8.75□□□□□ -1.01
CDH8-212ENST00000584506 NEUROD2Q15784 382 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 SULT6B1Q6IMI4 303 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 WDR63Q8IWG1 891 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
CDH8-212ENST00000584506 AHDC1Q5TGY3 1603 aaPredicted RBP8.75□□□□□ -1.01
CDH8-212ENST00000584506 ZNF521Q96K83 1311 aa8.75□□□□□ -1.01
CDH8-212ENST00000584506 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
CDH8-212ENST00000584506 PHLPP1O60346 1717 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 E9PSI1 815 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 HAP1P54257 671 aaPredicted RBP8.74□□□□□ -1.01
CDH8-212ENST00000584506 LMOD3Q0VAK6 560 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 NFE2L2Q16236 605 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 WWC1Q8IX03 1113 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 EYA1Q99502 592 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 IGSF1Q8N6C5 1336 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
CDH8-212ENST00000584506 COL18A1P39060 1754 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 NEFLP07196 543 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 RIPK4P57078 832 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
CDH8-212ENST00000584506 CALD1Q05682 793 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms