RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 KRT222Q8N1A0 295 aa13.44□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 NLRP1Q9C000 1473 aa13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 PAIP2Q9BPZ3 127 aaKnown RBP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CEP170BQ9Y4F5 1589 aaPredicted RBP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 KDM4AO75164 1064 aa13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CCDC97Q96F63 343 aaPredicted RBP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 TTC19Q6DKK2 380 aaPredicted RBP13.42□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CAND2O75155 1236 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 MCM5P33992 734 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 MAP2K2P36507 400 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 NBPF10Q6P3W6 841 aaKnown RBP13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 SYT10Q6XYQ8 523 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ANKRD20A12PQ8NF67 263 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 MYO1CO00159 1063 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 MYO3AQ8NEV4 1616 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
CCDC144NL-AS1-218ENST00000583962 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.268e-8■■□□□ 11.7
CCDC144NL-AS1-218ENST00000583962 NUP155O75694 1391 aa13.4□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 PPP1R12AO14974 1030 aaPredicted RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CCT2P78371 535 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CAVIN1Q6NZI2 390 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ZC3H13Q5T200 1668 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 TPM3P06753 285 aa13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 TTC31Q49AM3 519 aaPredicted RBP13.39□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 MAFGO15525 162 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 KRBA2Q6ZNG9 492 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 IDI1Q13907 227 aa13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ZKSCAN8Q15776 578 aaPredicted RBP13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 MED4Q9NPJ6 270 aa13.37□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 MROH1Q8NDA8 1641 aa13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 NUCKS1Q9H1E3 243 aaKnown RBP13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CEP152O94986 1710 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 NEBLO76041 1014 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 SPATA31D1Q6ZQQ2 1576 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 NPHP1O15259 732 aa13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 DNAJC14Q6Y2X3 702 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 CTNNA3Q9UI47 895 aa13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 LIG1P18858 919 aa13.34□□□□□ -0.27
CCDC144NL-AS1-218ENST00000583962 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 NPHP4O75161 1426 aaPredicted RBP13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 HSP90AB1P08238 724 aaKnown RBP13.33□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 LMTK2Q8IWU2 1503 aa13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 ATP2B1P20020 1258 aa13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 CPSF2Q9P2I0 782 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
CCDC144NL-AS1-218ENST00000583962 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms