RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
IFT20-213ENST00000583796 BCAR3O75815 825 aa13.16□□□□□ -0.3
IFT20-213ENST00000583796 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
IFT20-213ENST00000583796 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
IFT20-213ENST00000583796 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
IFT20-213ENST00000583796 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
IFT20-213ENST00000583796 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
IFT20-213ENST00000583796 SPATA31A3Q5VYP0 1347 aa13.14□□□□□ -0.31
IFT20-213ENST00000583796 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
IFT20-213ENST00000583796 CPDO75976 1380 aa13.14□□□□□ -0.31
IFT20-213ENST00000583796 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
IFT20-213ENST00000583796 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
IFT20-213ENST00000583796 ZKSCAN2Q63HK3 967 aa13.13□□□□□ -0.31
IFT20-213ENST00000583796 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
IFT20-213ENST00000583796 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
IFT20-213ENST00000583796 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
IFT20-213ENST00000583796 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
IFT20-213ENST00000583796 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
IFT20-213ENST00000583796 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
IFT20-213ENST00000583796 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
IFT20-213ENST00000583796 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
IFT20-213ENST00000583796 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
IFT20-213ENST00000583796 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
IFT20-213ENST00000583796 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
IFT20-213ENST00000583796 CRB1P82279 1406 aa13.12□□□□□ -0.31
IFT20-213ENST00000583796 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
IFT20-213ENST00000583796 CHL1O00533 1208 aa13.11□□□□□ -0.31
IFT20-213ENST00000583796 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
IFT20-213ENST00000583796 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
IFT20-213ENST00000583796 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 COL18A1P39060 1754 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 ERBB3P21860 1342 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
IFT20-213ENST00000583796 VAMP4O75379 141 aa13.09□□□□□ -0.31
IFT20-213ENST00000583796 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
IFT20-213ENST00000583796 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
IFT20-213ENST00000583796 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
IFT20-213ENST00000583796 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
IFT20-213ENST00000583796 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
IFT20-213ENST00000583796 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
IFT20-213ENST00000583796 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
IFT20-213ENST00000583796 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
IFT20-213ENST00000583796 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
IFT20-213ENST00000583796 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
IFT20-213ENST00000583796 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
IFT20-213ENST00000583796 LAS1LQ9Y4W2 734 aaKnown RBP13.08□□□□□ -0.32
IFT20-213ENST00000583796 ANKRD24Q8TF21 1146 aa13.07□□□□□ -0.32
IFT20-213ENST00000583796 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
IFT20-213ENST00000583796 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
IFT20-213ENST00000583796 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
IFT20-213ENST00000583796 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
IFT20-213ENST00000583796 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
IFT20-213ENST00000583796 RGPD2P0DJD1 1756 aa13.06□□□□□ -0.32
IFT20-213ENST00000583796 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
IFT20-213ENST00000583796 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
IFT20-213ENST00000583796 MCM10Q7L590 875 aa13.06□□□□□ -0.32
IFT20-213ENST00000583796 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
IFT20-213ENST00000583796 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
IFT20-213ENST00000583796 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
IFT20-213ENST00000583796 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
IFT20-213ENST00000583796 TRIM27P14373 513 aa13.05□□□□□ -0.32
IFT20-213ENST00000583796 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
IFT20-213ENST00000583796 BCL2L13Q9BXK5 485 aa13.05□□□□□ -0.32
IFT20-213ENST00000583796 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
IFT20-213ENST00000583796 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
IFT20-213ENST00000583796 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
IFT20-213ENST00000583796 PANK1Q8TE04 598 aa13.04□□□□□ -0.32
IFT20-213ENST00000583796 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
IFT20-213ENST00000583796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
IFT20-213ENST00000583796 LTBP4Q8N2S1 1624 aa13.04□□□□□ -0.32
IFT20-213ENST00000583796 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
IFT20-213ENST00000583796 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
IFT20-213ENST00000583796 COG6Q9Y2V7 657 aa13.04□□□□□ -0.32
IFT20-213ENST00000583796 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
IFT20-213ENST00000583796 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
IFT20-213ENST00000583796 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
IFT20-213ENST00000583796 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
IFT20-213ENST00000583796 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
IFT20-213ENST00000583796 KDM3BQ7LBC6 1761 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 CACNA1FO60840 1977 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 RLBP1P12271 317 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
IFT20-213ENST00000583796 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
IFT20-213ENST00000583796 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.33
IFT20-213ENST00000583796 PTPRCP08575 1304 aa13.02□□□□□ -0.33
IFT20-213ENST00000583796 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
IFT20-213ENST00000583796 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
IFT20-213ENST00000583796 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
IFT20-213ENST00000583796 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
IFT20-213ENST00000583796 ABCC4O15439 1325 aa13.01□□□□□ -0.33
IFT20-213ENST00000583796 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
IFT20-213ENST00000583796 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
IFT20-213ENST00000583796 HOXB7P09629 217 aa13□□□□□ -0.33
IFT20-213ENST00000583796 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
IFT20-213ENST00000583796 IL17REQ8NFR9 667 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms