RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 SPTY2D1Q68D10 685 aaPredicted RBP13.27□□□□□ -0.29
MSI2-217ENST00000583705 GNAI3P08754 354 aa13.27□□□□□ -0.29
MSI2-217ENST00000583705 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
MSI2-217ENST00000583705 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 JMYQ8N9B5 988 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 EPB41L2O43491 1005 aaKnown RBP13.26□□□□□ -0.29
MSI2-217ENST00000583705 BCCIPQ9P287 314 aaKnown RBP eCLIP13.26□□□□□ -0.29
MSI2-217ENST00000583705 GOLGA6L7A0A1B0GV03 622 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 CYP46A1Q9Y6A2 500 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
MSI2-217ENST00000583705 MPRIPQ6WCQ1 1025 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 CTNNA2P26232 953 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 ZSCAN25Q6NSZ9 544 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 TMX1Q9H3N1 280 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 SAMM50Q9Y512 469 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 DDX11Q96FC9 970 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 DACH1Q9UI36 760 aa13.26□□□□□ -0.29
MSI2-217ENST00000583705 GSTTP1A0A1W2PQM5 241 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 BCAR3O75815 825 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
MSI2-217ENST00000583705 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 MMRN2Q9H8L6 949 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
MSI2-217ENST00000583705 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
MSI2-217ENST00000583705 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 TAF4BQ92750 862 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 VAT1LQ9HCJ6 419 aa13.25□□□□□ -0.29
MSI2-217ENST00000583705 PTPRGP23470 1445 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 STAMBPO95630 424 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
MSI2-217ENST00000583705 DDX23Q9BUQ8 820 aaKnown RBP13.24□□□□□ -0.29
MSI2-217ENST00000583705 USP8P40818 1118 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 CUL5Q93034 780 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 PPP1R12BO60237 982 aaPredicted RBP13.24□□□□□ -0.29
MSI2-217ENST00000583705 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
MSI2-217ENST00000583705 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
MSI2-217ENST00000583705 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
MSI2-217ENST00000583705 CFAP45Q9UL16 551 aa13.23□□□□□ -0.29
MSI2-217ENST00000583705 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
MSI2-217ENST00000583705 RABEP1Q15276 862 aa13.23□□□□□ -0.29
MSI2-217ENST00000583705 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
MSI2-217ENST00000583705 CCP110O43303 1012 aa13.23□□□□□ -0.29
MSI2-217ENST00000583705 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
MSI2-217ENST00000583705 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
MSI2-217ENST00000583705 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
MSI2-217ENST00000583705 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
MSI2-217ENST00000583705 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
MSI2-217ENST00000583705 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 STARD3NLO95772 234 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 CETN2P41208 172 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 PDCP20941 246 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 LMAN1P49257 510 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
MSI2-217ENST00000583705 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
MSI2-217ENST00000583705 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
MSI2-217ENST00000583705 KIF20AO95235 890 aa13.21□□□□□ -0.29
MSI2-217ENST00000583705 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
MSI2-217ENST00000583705 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
MSI2-217ENST00000583705 IL1RAPL2Q9NP60 686 aa13.21□□□□□ -0.29
MSI2-217ENST00000583705 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
MSI2-217ENST00000583705 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.3
MSI2-217ENST00000583705 DPH6Q7L8W6 267 aa13.21□□□□□ -0.3
MSI2-217ENST00000583705 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
MSI2-217ENST00000583705 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 TERF1P54274 439 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 CACNA2D4Q7Z3S7 1137 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 JAKMIP1Q96N16 626 aaKnown RBP13.2□□□□□ -0.3
MSI2-217ENST00000583705 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 PLS1Q14651 629 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 RFX1P22670 979 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
MSI2-217ENST00000583705 CAMK4Q16566 473 aa13.19□□□□□ -0.3
MSI2-217ENST00000583705 BICD1Q96G01 975 aa13.19□□□□□ -0.3
MSI2-217ENST00000583705 CDKL5O76039 1030 aa13.19□□□□□ -0.3
MSI2-217ENST00000583705 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
MSI2-217ENST00000583705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
MSI2-217ENST00000583705 TSG101Q99816 390 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 GPTP24298 496 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
MSI2-217ENST00000583705 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms