RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CARD10Q9BWT7 1032 aa19.13■□□□□ 0.65
SENP3-208ENST00000583277 PLEKHO1Q53GL0 409 aaPredicted RBP19.12■□□□□ 0.65
SENP3-208ENST00000583277 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
SENP3-208ENST00000583277 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
SENP3-208ENST00000583277 MYH16Q9H6N6 1097 aa19.11■□□□□ 0.65
SENP3-208ENST00000583277 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
SENP3-208ENST00000583277 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
SENP3-208ENST00000583277 MEGF6O75095 1541 aa19.11■□□□□ 0.65
SENP3-208ENST00000583277 LRRC37A3O60309 1634 aa19.11■□□□□ 0.65
SENP3-208ENST00000583277 TATP17735 454 aaPredicted RBP19.1■□□□□ 0.65
SENP3-208ENST00000583277 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
SENP3-208ENST00000583277 SLIT2O94813 1529 aa19.1■□□□□ 0.65
SENP3-208ENST00000583277 RTF1Q92541 710 aaKnown RBP19.1■□□□□ 0.65
SENP3-208ENST00000583277 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
SENP3-208ENST00000583277 LARP1Q6PKG0 1096 aaKnown RBP19.09■□□□□ 0.65
SENP3-208ENST00000583277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
SENP3-208ENST00000583277 WNK3Q9BYP7 1800 aa19.09■□□□□ 0.65
SENP3-208ENST00000583277 OVOS2A0A0G2JMS6 1433 aa19.09■□□□□ 0.65
SENP3-208ENST00000583277 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.65
SENP3-208ENST00000583277 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.65
SENP3-208ENST00000583277 LRP6O75581 1613 aa19.07■□□□□ 0.64
SENP3-208ENST00000583277 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
SENP3-208ENST00000583277 FBXO41Q8TF61 875 aa19.07■□□□□ 0.64
SENP3-208ENST00000583277 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
SENP3-208ENST00000583277 IFT57Q9NWB7 429 aa19.06■□□□□ 0.64
SENP3-208ENST00000583277 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
SENP3-208ENST00000583277 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
SENP3-208ENST00000583277 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
SENP3-208ENST00000583277 GNAI1P63096 354 aa19.05■□□□□ 0.64
SENP3-208ENST00000583277 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
SENP3-208ENST00000583277 IL2RBP14784 551 aa19.04■□□□□ 0.64
SENP3-208ENST00000583277 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
SENP3-208ENST00000583277 FANCIQ9NVI1 1328 aa19.04■□□□□ 0.64
SENP3-208ENST00000583277 DCTN1Q14203 1278 aa19.03■□□□□ 0.64
SENP3-208ENST00000583277 MCM10Q7L590 875 aa19.03■□□□□ 0.64
SENP3-208ENST00000583277 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
SENP3-208ENST00000583277 SCN11AQ9UI33 1791 aa19.02■□□□□ 0.64
SENP3-208ENST00000583277 ZNF853P0CG23 659 aa19.02■□□□□ 0.63
SENP3-208ENST00000583277 C8orf37Q96NL8 207 aa19.02■□□□□ 0.63
SENP3-208ENST00000583277 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.63
SENP3-208ENST00000583277 SHANK3Q9BYB0 1731 aa19.02■□□□□ 0.63
SENP3-208ENST00000583277 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
SENP3-208ENST00000583277 DISP2A7MBM2 1401 aa19.01■□□□□ 0.63
SENP3-208ENST00000583277 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
SENP3-208ENST00000583277 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
SENP3-208ENST00000583277 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
SENP3-208ENST00000583277 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
SENP3-208ENST00000583277 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
SENP3-208ENST00000583277 MEX3CQ5U5Q3 659 aaKnown RBP19■□□□□ 0.63
SENP3-208ENST00000583277 UNC5CLQ8IV45 518 aa19■□□□□ 0.63
SENP3-208ENST00000583277 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
SENP3-208ENST00000583277 SPATA31A1Q5TZJ5 1347 aa18.99■□□□□ 0.63
SENP3-208ENST00000583277 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
SENP3-208ENST00000583277 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
SENP3-208ENST00000583277 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
SENP3-208ENST00000583277 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
SENP3-208ENST00000583277 LAS1LQ9Y4W2 734 aaKnown RBP18.99■□□□□ 0.63
SENP3-208ENST00000583277 BCL9LQ86UU0 1499 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
SENP3-208ENST00000583277 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
SENP3-208ENST00000583277 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
SENP3-208ENST00000583277 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 PHKG2P15735 406 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 IL17REQ8NFR9 667 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 BABAM1Q9NWV8 329 aa18.98■□□□□ 0.63
SENP3-208ENST00000583277 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
SENP3-208ENST00000583277 CHL1O00533 1208 aa18.97■□□□□ 0.63
SENP3-208ENST00000583277 MBIPQ9NS73 344 aa18.97■□□□□ 0.63
SENP3-208ENST00000583277 RNMTO43148 476 aaKnown RBP18.96■□□□□ 0.63
SENP3-208ENST00000583277 NEFLP07196 543 aa18.95■□□□□ 0.62
SENP3-208ENST00000583277 VPS72Q15906 364 aa18.95■□□□□ 0.62
SENP3-208ENST00000583277 MRC1P22897 1456 aa18.95■□□□□ 0.62
SENP3-208ENST00000583277 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
SENP3-208ENST00000583277 KDM3BQ7LBC6 1761 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 RNF123Q5XPI4 1314 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 CYP27B1O15528 508 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
SENP3-208ENST00000583277 TEFQ10587 303 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
SENP3-208ENST00000583277 MPRIPQ6WCQ1 1025 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 DCAF5Q96JK2 942 aa18.94■□□□□ 0.62
SENP3-208ENST00000583277 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
SENP3-208ENST00000583277 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
SENP3-208ENST00000583277 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
SENP3-208ENST00000583277 USP21Q9UK80 565 aa18.93■□□□□ 0.62
SENP3-208ENST00000583277 CCDC9Q9Y3X0 531 aaKnown RBP18.93■□□□□ 0.62
SENP3-208ENST00000583277 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
SENP3-208ENST00000583277 LGR6Q9HBX8 967 aa18.93■□□□□ 0.62
SENP3-208ENST00000583277 AFF2P51816 1311 aa18.91■□□□□ 0.62
SENP3-208ENST00000583277 NKX1-1Q15270 411 aaPredicted RBP18.9■□□□□ 0.62
SENP3-208ENST00000583277 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.62
SENP3-208ENST00000583277 EXOC5O00471 708 aa18.89■□□□□ 0.61
SENP3-208ENST00000583277 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
SENP3-208ENST00000583277 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.88■□□□□ 0.61
SENP3-208ENST00000583277 DDX54Q8TDD1 881 aaKnown RBP18.88■□□□□ 0.61
SENP3-208ENST00000583277 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
SENP3-208ENST00000583277 ATRNO75882 1429 aa18.88■□□□□ 0.61
SENP3-208ENST00000583277 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
SENP3-208ENST00000583277 TOGARAM1Q9Y4F4 1720 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms