RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
GGA3-215ENST00000582821 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
GGA3-215ENST00000582821 DDX54Q8TDD1 881 aaKnown RBP19.03■□□□□ 0.64
GGA3-215ENST00000582821 RGPD3A6NKT7 1758 aaPredicted RBP19.01■□□□□ 0.63
GGA3-215ENST00000582821 RGPD4Q7Z3J3 1758 aa19.01■□□□□ 0.63
GGA3-215ENST00000582821 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
GGA3-215ENST00000582821 KCNQ2O43526 872 aa19.01■□□□□ 0.63
GGA3-215ENST00000582821 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
GGA3-215ENST00000582821 NHSQ6T4R5 1651 aa19■□□□□ 0.63
GGA3-215ENST00000582821 RREB1Q92766 1687 aa19■□□□□ 0.63
GGA3-215ENST00000582821 PLEKHG2Q9H7P9 1386 aa18.99■□□□□ 0.63
GGA3-215ENST00000582821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.634e-6■■□□□ 11.4
GGA3-215ENST00000582821 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
GGA3-215ENST00000582821 ACSBG1Q96GR2 724 aa18.98■□□□□ 0.63
GGA3-215ENST00000582821 MTHFSP49914 203 aa18.97■□□□□ 0.63
GGA3-215ENST00000582821 PROM2Q8N271 834 aa18.97■□□□□ 0.63
GGA3-215ENST00000582821 SRCAPQ6ZRS2 3230 aa18.97■□□□□ 0.63
GGA3-215ENST00000582821 PCDH11XQ9BZA7 1347 aa18.97■□□□□ 0.63
GGA3-215ENST00000582821 PCDH11YQ9BZA8 1340 aa18.97■□□□□ 0.63
GGA3-215ENST00000582821 NUP188Q5SRE5 1749 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 CYP27B1O15528 508 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 IL13P35225 146 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 NBPF14Q5TI25 921 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 SPG7Q9UQ90 795 aa18.95■□□□□ 0.62
GGA3-215ENST00000582821 NKX1-1Q15270 411 aaPredicted RBP18.94■□□□□ 0.62
GGA3-215ENST00000582821 BTAF1O14981 1849 aa18.94■□□□□ 0.62
GGA3-215ENST00000582821 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
GGA3-215ENST00000582821 TXNRD1Q16881 649 aa18.93■□□□□ 0.62
GGA3-215ENST00000582821 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
GGA3-215ENST00000582821 PSDA5PKW4 1024 aaPredicted RBP18.91■□□□□ 0.62
GGA3-215ENST00000582821 R3HDM1Q15032 1099 aaKnown RBP18.91■□□□□ 0.62
GGA3-215ENST00000582821 DOT1LQ8TEK3 1739 aa18.9■□□□□ 0.62
GGA3-215ENST00000582821 KDRP35968 1356 aa18.9■□□□□ 0.62
GGA3-215ENST00000582821 AMOTQ4VCS5 1084 aa18.89■□□□□ 0.61
GGA3-215ENST00000582821 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
GGA3-215ENST00000582821 SYTL4Q96C24 671 aaPredicted RBP18.89■□□□□ 0.61
GGA3-215ENST00000582821 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
GGA3-215ENST00000582821 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
GGA3-215ENST00000582821 SULT6B1Q6IMI4 303 aa18.88■□□□□ 0.61
GGA3-215ENST00000582821 PHKG2P15735 406 aa18.87■□□□□ 0.61
GGA3-215ENST00000582821 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
GGA3-215ENST00000582821 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
GGA3-215ENST00000582821 SLC27A3Q5K4L6 730 aa18.86■□□□□ 0.61
GGA3-215ENST00000582821 ITGB4P16144 1822 aa18.86■□□□□ 0.61
GGA3-215ENST00000582821 ANO8Q9HCE9 1232 aaPredicted RBP18.84■□□□□ 0.61
GGA3-215ENST00000582821 LRRC4BQ9NT99 713 aa18.84■□□□□ 0.61
GGA3-215ENST00000582821 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
GGA3-215ENST00000582821 LY75O60449 1722 aa18.83■□□□□ 0.61
GGA3-215ENST00000582821 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.6
GGA3-215ENST00000582821 PPP2R1AP30153 589 aa18.83■□□□□ 0.6
GGA3-215ENST00000582821 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
GGA3-215ENST00000582821 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
GGA3-215ENST00000582821 MPRIPQ6WCQ1 1025 aa18.82■□□□□ 0.6
GGA3-215ENST00000582821 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
GGA3-215ENST00000582821 ZNF530Q6P9A1 599 aaPredicted RBP18.81■□□□□ 0.6
GGA3-215ENST00000582821 PIGBQ92521 554 aa18.81■□□□□ 0.6
GGA3-215ENST00000582821 DCAF5Q96JK2 942 aa18.81■□□□□ 0.6
GGA3-215ENST00000582821 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
GGA3-215ENST00000582821 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
GGA3-215ENST00000582821 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
GGA3-215ENST00000582821 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
GGA3-215ENST00000582821 LRP5O75197 1615 aa18.8■□□□□ 0.6
GGA3-215ENST00000582821 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
GGA3-215ENST00000582821 HMOX1P09601 288 aa18.79■□□□□ 0.6
GGA3-215ENST00000582821 DDX10Q13206 875 aaKnown RBP18.78■□□□□ 0.6
GGA3-215ENST00000582821 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
GGA3-215ENST00000582821 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
GGA3-215ENST00000582821 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
GGA3-215ENST00000582821 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
GGA3-215ENST00000582821 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
GGA3-215ENST00000582821 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
GGA3-215ENST00000582821 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
GGA3-215ENST00000582821 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
GGA3-215ENST00000582821 CASZ1Q86V15 1759 aa18.75■□□□□ 0.59
GGA3-215ENST00000582821 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
GGA3-215ENST00000582821 KCNQ4P56696 695 aa18.74■□□□□ 0.59
GGA3-215ENST00000582821 RALBP1Q15311 655 aa18.74■□□□□ 0.59
GGA3-215ENST00000582821 ZNF827Q17R98 1081 aa18.74■□□□□ 0.59
GGA3-215ENST00000582821 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
GGA3-215ENST00000582821 SPON1Q9HCB6 807 aa18.73■□□□□ 0.59
GGA3-215ENST00000582821 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
GGA3-215ENST00000582821 ASAP1Q9ULH1 1129 aa18.73■□□□□ 0.59
GGA3-215ENST00000582821 SCN11AQ9UI33 1791 aa18.73■□□□□ 0.59
GGA3-215ENST00000582821 QSER1Q2KHR3 1735 aa18.72■□□□□ 0.59
GGA3-215ENST00000582821 CABP4P57796 275 aa18.72■□□□□ 0.59
GGA3-215ENST00000582821 PDGFDQ9GZP0 370 aaPredicted RBP18.72■□□□□ 0.59
GGA3-215ENST00000582821 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
GGA3-215ENST00000582821 FCHSD2O94868 740 aa18.71■□□□□ 0.59
GGA3-215ENST00000582821 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
GGA3-215ENST00000582821 SIK1P57059 783 aa18.7■□□□□ 0.58
GGA3-215ENST00000582821 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
GGA3-215ENST00000582821 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
GGA3-215ENST00000582821 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
GGA3-215ENST00000582821 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.58
GGA3-215ENST00000582821 NFATC2IPQ8NCF5 419 aa18.69■□□□□ 0.58
GGA3-215ENST00000582821 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
GGA3-215ENST00000582821 LGR6Q9HBX8 967 aa18.69■□□□□ 0.58
GGA3-215ENST00000582821 TFCP2L1Q9NZI6 479 aa18.69■□□□□ 0.58
GGA3-215ENST00000582821 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms