RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
SRSF1-205ENST00000582730 ARHGEF10O15013 1369 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 NUCB1Q02818 461 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 BECN1Q14457 450 aa17.16■□□□□ 0.34
SRSF1-205ENST00000582730 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
SRSF1-205ENST00000582730 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-205ENST00000582730 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-205ENST00000582730 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
SRSF1-205ENST00000582730 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.34
SRSF1-205ENST00000582730 XRN1Q8IZH2 1706 aaKnown RBP17.14■□□□□ 0.34
SRSF1-205ENST00000582730 HOXC9P31274 260 aa17.14■□□□□ 0.33
SRSF1-205ENST00000582730 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
SRSF1-205ENST00000582730 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
SRSF1-205ENST00000582730 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
SRSF1-205ENST00000582730 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
SRSF1-205ENST00000582730 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
SRSF1-205ENST00000582730 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
SRSF1-205ENST00000582730 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
SRSF1-205ENST00000582730 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
SRSF1-205ENST00000582730 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-205ENST00000582730 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
SRSF1-205ENST00000582730 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
SRSF1-205ENST00000582730 PSME1Q06323 249 aa17.11■□□□□ 0.33
SRSF1-205ENST00000582730 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
SRSF1-205ENST00000582730 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
SRSF1-205ENST00000582730 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
SRSF1-205ENST00000582730 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
SRSF1-205ENST00000582730 CRB1P82279 1406 aa17.1■□□□□ 0.33
SRSF1-205ENST00000582730 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
SRSF1-205ENST00000582730 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
SRSF1-205ENST00000582730 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
SRSF1-205ENST00000582730 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
SRSF1-205ENST00000582730 APBB1O00213 710 aa17.09■□□□□ 0.33
SRSF1-205ENST00000582730 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
SRSF1-205ENST00000582730 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
SRSF1-205ENST00000582730 KDRP35968 1356 aa17.09■□□□□ 0.33
SRSF1-205ENST00000582730 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
SRSF1-205ENST00000582730 F6X3S4 739 aa17.07■□□□□ 0.32
SRSF1-205ENST00000582730 MSH6P52701 1360 aa17.07■□□□□ 0.32
SRSF1-205ENST00000582730 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SRSF1-205ENST00000582730 G2E3Q7L622 706 aa17.07■□□□□ 0.32
SRSF1-205ENST00000582730 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
SRSF1-205ENST00000582730 PTPRCP08575 1304 aa17.06■□□□□ 0.32
SRSF1-205ENST00000582730 MEIS3Q99687 375 aa17.06■□□□□ 0.32
SRSF1-205ENST00000582730 TBC1D2Q9BYX2 928 aa17.05■□□□□ 0.32
SRSF1-205ENST00000582730 FAM43AQ8N2R8 423 aa17.05■□□□□ 0.32
SRSF1-205ENST00000582730 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
SRSF1-205ENST00000582730 RGS12O14924 1447 aa17.03■□□□□ 0.32
SRSF1-205ENST00000582730 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
SRSF1-205ENST00000582730 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.32
SRSF1-205ENST00000582730 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-205ENST00000582730 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
SRSF1-205ENST00000582730 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
SRSF1-205ENST00000582730 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
SRSF1-205ENST00000582730 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
SRSF1-205ENST00000582730 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
SRSF1-205ENST00000582730 IP6K1Q92551 441 aa17.01■□□□□ 0.31
SRSF1-205ENST00000582730 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
SRSF1-205ENST00000582730 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
SRSF1-205ENST00000582730 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 NBPF4Q96M43 638 aa17■□□□□ 0.31
SRSF1-205ENST00000582730 DCTPP1Q9H773 170 aa17■□□□□ 0.31
SRSF1-205ENST00000582730 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
SRSF1-205ENST00000582730 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 NPHP4O75161 1426 aaPredicted RBP17■□□□□ 0.31
SRSF1-205ENST00000582730 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
SRSF1-205ENST00000582730 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-205ENST00000582730 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-205ENST00000582730 FLIIQ13045 1269 aa16.99■□□□□ 0.31
SRSF1-205ENST00000582730 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-205ENST00000582730 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
SRSF1-205ENST00000582730 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
SRSF1-205ENST00000582730 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
SRSF1-205ENST00000582730 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
SRSF1-205ENST00000582730 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
SRSF1-205ENST00000582730 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
SRSF1-205ENST00000582730 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
SRSF1-205ENST00000582730 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
SRSF1-205ENST00000582730 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
SRSF1-205ENST00000582730 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
SRSF1-205ENST00000582730 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
SRSF1-205ENST00000582730 HMMRO75330 724 aa16.96■□□□□ 0.31
SRSF1-205ENST00000582730 GSPT1P15170 499 aaKnown RBP16.95■□□□□ 0.3
SRSF1-205ENST00000582730 LTN1O94822 1766 aa16.95■□□□□ 0.3
SRSF1-205ENST00000582730 GCP02774 474 aa16.95■□□□□ 0.3
SRSF1-205ENST00000582730 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
SRSF1-205ENST00000582730 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
SRSF1-205ENST00000582730 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-205ENST00000582730 CDC45O75419 566 aa16.94■□□□□ 0.3
SRSF1-205ENST00000582730 GNAI2P04899 355 aa16.94■□□□□ 0.3
SRSF1-205ENST00000582730 TEFQ10587 303 aa16.94■□□□□ 0.3
SRSF1-205ENST00000582730 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
SRSF1-205ENST00000582730 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
SRSF1-205ENST00000582730 TTC22Q5TAA0 569 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms